RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 JCADQ9P266 1359 aa27.18■■□□□ 1.94
UBE2D4-209ENST00000454428 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
UBE2D4-209ENST00000454428 MYO5BQ9ULV0 1848 aa27.16■■□□□ 1.94
UBE2D4-209ENST00000454428 LOC105371045A0A1W2PR82 267 aa27.16■■□□□ 1.94
UBE2D4-209ENST00000454428 LRP6O75581 1613 aa27.15■■□□□ 1.94
UBE2D4-209ENST00000454428 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
UBE2D4-209ENST00000454428 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
UBE2D4-209ENST00000454428 FGD6Q6ZV73 1430 aa27.13■■□□□ 1.93
UBE2D4-209ENST00000454428 SLC52A1Q9NWF4 448 aa27.12■■□□□ 1.93
UBE2D4-209ENST00000454428 PLEKHG1Q9ULL1 1385 aa27.11■■□□□ 1.93
UBE2D4-209ENST00000454428 GCC2Q8IWJ2 1684 aa27.09■■□□□ 1.93
UBE2D4-209ENST00000454428 BCANQ96GW7 911 aa27.08■■□□□ 1.93
UBE2D4-209ENST00000454428 TMEM131LA2VDJ0 1609 aa27.08■■□□□ 1.93
UBE2D4-209ENST00000454428 RPRD2Q5VT52 1461 aaKnown RBP27.07■■□□□ 1.92
UBE2D4-209ENST00000454428 RIMS2Q9UQ26 1411 aa27.06■■□□□ 1.92
UBE2D4-209ENST00000454428 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
UBE2D4-209ENST00000454428 NCOA3Q9Y6Q9 1424 aa27.04■■□□□ 1.92
UBE2D4-209ENST00000454428 AHDC1Q5TGY3 1603 aaPredicted RBP27.04■■□□□ 1.92
UBE2D4-209ENST00000454428 SHPRHQ149N8 1683 aa27.03■■□□□ 1.92
UBE2D4-209ENST00000454428 SPATA31A6Q5VVP1 1343 aa27.03■■□□□ 1.92
UBE2D4-209ENST00000454428 UPF1Q92900 1129 aaKnown RBP eCLIP27.03■■□□□ 1.92
UBE2D4-209ENST00000454428 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.03■■□□□ 1.92
UBE2D4-209ENST00000454428 TBX22Q9Y458 520 aa27.02■■□□□ 1.92
UBE2D4-209ENST00000454428 ADAMTS13Q76LX8 1427 aa27.01■■□□□ 1.91
UBE2D4-209ENST00000454428 DIP2AQ14689 1571 aa26.97■■□□□ 1.91
UBE2D4-209ENST00000454428 PPP1R15AO75807 674 aaPredicted RBP26.97■■□□□ 1.91
UBE2D4-209ENST00000454428 ZNF772Q68DY9 489 aaPredicted RBP26.97■■□□□ 1.91
UBE2D4-209ENST00000454428 TRIM52Q96A61 297 aa26.96■■□□□ 1.91
UBE2D4-209ENST00000454428 ANKRD50Q9ULJ7 1429 aa26.96■■□□□ 1.91
UBE2D4-209ENST00000454428 MEX3CQ5U5Q3 659 aaKnown RBP26.94■■□□□ 1.9
UBE2D4-209ENST00000454428 SRCAPQ6ZRS2 3230 aa26.94■■□□□ 1.9
UBE2D4-209ENST00000454428 HDGFP51858 240 aaKnown RBP26.93■■□□□ 1.9
UBE2D4-209ENST00000454428 C19orf44Q9H6X5 657 aa26.93■■□□□ 1.9
UBE2D4-209ENST00000454428 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
UBE2D4-209ENST00000454428 CADPS2Q86UW7 1296 aa26.92■■□□□ 1.9
UBE2D4-209ENST00000454428 C14orf37Q86TY3 774 aa26.91■■□□□ 1.9
UBE2D4-209ENST00000454428 PIK3R4Q99570 1358 aa26.91■■□□□ 1.9
UBE2D4-209ENST00000454428 E9PCH4 1651 aa26.91■■□□□ 1.9
UBE2D4-209ENST00000454428 PTPRUQ92729 1446 aa26.9■■□□□ 1.9
UBE2D4-209ENST00000454428 UNC13BO14795 1591 aa26.9■■□□□ 1.9
UBE2D4-209ENST00000454428 BRINP3Q76B58 766 aa26.89■■□□□ 1.9
UBE2D4-209ENST00000454428 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.89■■□□□ 1.9
UBE2D4-209ENST00000454428 ATF3P18847 181 aa26.88■■□□□ 1.89
UBE2D4-209ENST00000454428 APLP2Q06481 763 aa26.88■■□□□ 1.89
UBE2D4-209ENST00000454428 CDK12Q9NYV4 1490 aaPredicted RBP26.87■■□□□ 1.89
UBE2D4-209ENST00000454428 RXRBP28702 533 aa26.86■■□□□ 1.89
UBE2D4-209ENST00000454428 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
UBE2D4-209ENST00000454428 TRPM2O94759 1503 aa26.85■■□□□ 1.89
UBE2D4-209ENST00000454428 AMOTL2Q9Y2J4 779 aa26.83■■□□□ 1.89
UBE2D4-209ENST00000454428 ASXL1Q8IXJ9 1541 aa26.83■■□□□ 1.89
UBE2D4-209ENST00000454428 NRXN3Q9Y4C0 1643 aa26.83■■□□□ 1.88
UBE2D4-209ENST00000454428 NUTM2BA6NNL0 878 aaPredicted RBP26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 NUTM2EB1AL46 878 aaPredicted RBP26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 NUTM2AQ8IVF1 878 aaPredicted RBP26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 NHSL1Q5SYE7 1610 aa26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 XRN1Q8IZH2 1706 aaKnown RBP26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
UBE2D4-209ENST00000454428 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
UBE2D4-209ENST00000454428 DCCP43146 1447 aa26.81■■□□□ 1.88
UBE2D4-209ENST00000454428 AFF2P51816 1311 aa26.8■■□□□ 1.88
UBE2D4-209ENST00000454428 MST1RQ04912 1400 aa26.79■■□□□ 1.88
UBE2D4-209ENST00000454428 IQGAP3Q86VI3 1631 aa26.79■■□□□ 1.88
UBE2D4-209ENST00000454428 RGS12O14924 1447 aa26.75■■□□□ 1.87
UBE2D4-209ENST00000454428 SETBP1Q9Y6X0 1596 aa26.74■■□□□ 1.87
UBE2D4-209ENST00000454428 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
UBE2D4-209ENST00000454428 PNPLA6Q8IY17 1366 aa26.7■■□□□ 1.86
UBE2D4-209ENST00000454428 METP08581 1390 aa26.69■■□□□ 1.86
UBE2D4-209ENST00000454428 LRRC59Q96AG4 307 aaKnown RBP26.68■■□□□ 1.86
UBE2D4-209ENST00000454428 C8orf37Q96NL8 207 aa26.67■■□□□ 1.86
UBE2D4-209ENST00000454428 QTRT2Q9H974 415 aaKnown RBP26.67■■□□□ 1.86
UBE2D4-209ENST00000454428 NALCNQ8IZF0 1738 aa26.67■■□□□ 1.86
UBE2D4-209ENST00000454428 ROCK1Q13464 1354 aa26.66■■□□□ 1.86
UBE2D4-209ENST00000454428 ADGRL3Q9HAR2 1447 aa26.65■■□□□ 1.86
UBE2D4-209ENST00000454428 RBM6P78332 1123 aaKnown RBP26.65■■□□□ 1.86
UBE2D4-209ENST00000454428 NUP155O75694 1391 aa26.63■■□□□ 1.85
UBE2D4-209ENST00000454428 EP400Q96L91 3159 aa26.63■■□□□ 1.85
UBE2D4-209ENST00000454428 SPHKAPQ2M3C7 1700 aa26.62■■□□□ 1.85
UBE2D4-209ENST00000454428 LAMC1P11047 1609 aa26.62■■□□□ 1.85
UBE2D4-209ENST00000454428 NEXMIFQ5QGS0 1516 aa26.57■■□□□ 1.84
UBE2D4-209ENST00000454428 C1orf167Q5SNV9 1468 aa26.56■■□□□ 1.84
UBE2D4-209ENST00000454428 ADAMTS2O95450 1211 aa26.55■■□□□ 1.84
UBE2D4-209ENST00000454428 NGLY1Q96IV0 654 aa26.54■■□□□ 1.84
UBE2D4-209ENST00000454428 CLTCL1P53675 1640 aa26.53■■□□□ 1.84
UBE2D4-209ENST00000454428 ZNF326Q5BKZ1 582 aaKnown RBP26.52■■□□□ 1.84
UBE2D4-209ENST00000454428 SOS2Q07890 1332 aaPredicted RBP26.51■■□□□ 1.83
UBE2D4-209ENST00000454428 ATAD2Q6PL18 1390 aa26.5■■□□□ 1.83
UBE2D4-209ENST00000454428 ORAI2Q96SN7 254 aa26.48■■□□□ 1.83
UBE2D4-209ENST00000454428 PTCH1Q13635 1447 aa26.48■■□□□ 1.83
UBE2D4-209ENST00000454428 COL22A1Q8NFW1 1626 aaPredicted RBP26.47■■□□□ 1.83
UBE2D4-209ENST00000454428 FNBP4Q8N3X1 1017 aaPredicted RBP26.47■■□□□ 1.83
UBE2D4-209ENST00000454428 USP21Q9UK80 565 aa26.47■■□□□ 1.83
UBE2D4-209ENST00000454428 ROBO2Q9HCK4 1378 aa26.46■■□□□ 1.83
UBE2D4-209ENST00000454428 ATRNO75882 1429 aa26.46■■□□□ 1.83
UBE2D4-209ENST00000454428 TRPC5Q9UL62 973 aaPredicted RBP26.44■■□□□ 1.82
UBE2D4-209ENST00000454428 PRAG1Q86YV5 1406 aa26.42■■□□□ 1.82
UBE2D4-209ENST00000454428 ITGAEP38570 1179 aa26.42■■□□□ 1.82
UBE2D4-209ENST00000454428 KIF1BO60333 1816 aa26.41■■□□□ 1.82
UBE2D4-209ENST00000454428 MYOM2P54296 1465 aa26.4■■□□□ 1.82
UBE2D4-209ENST00000454428 BCL9LQ86UU0 1499 aa26.38■■□□□ 1.81
UBE2D4-209ENST00000454428 MARF1Q9Y4F3 1742 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms