RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 ZFYVE9O95405 1425 aa24.9■■□□□ 1.58
NCKIPSD-208ENST00000454134 RIMS2Q9UQ26 1411 aa24.9■■□□□ 1.58
NCKIPSD-208ENST00000454134 ALKQ9UM73 1620 aa24.88■■□□□ 1.57
NCKIPSD-208ENST00000454134 PPP1R15AO75807 674 aaPredicted RBP24.87■■□□□ 1.57
NCKIPSD-208ENST00000454134 NUTM2DQ5VT03 806 aaPredicted RBP24.85■■□□□ 1.57
NCKIPSD-208ENST00000454134 HFM1A2PYH4 1435 aa24.84■■□□□ 1.57
NCKIPSD-208ENST00000454134 PLEKHG1Q9ULL1 1385 aa24.83■■□□□ 1.57
NCKIPSD-208ENST00000454134 KCNA6P17658 529 aa24.83■■□□□ 1.57
NCKIPSD-208ENST00000454134 HSPA1LP34931 641 aa24.83■■□□□ 1.57
NCKIPSD-208ENST00000454134 HDGFP51858 240 aaKnown RBP24.83■■□□□ 1.57
NCKIPSD-208ENST00000454134 SPHKAPQ2M3C7 1700 aa24.83■■□□□ 1.57
NCKIPSD-208ENST00000454134 XIRP1Q702N8 1843 aaKnown RBP24.82■■□□□ 1.56
NCKIPSD-208ENST00000454134 DISP3Q9P2K9 1392 aa24.81■■□□□ 1.56
NCKIPSD-208ENST00000454134 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
NCKIPSD-208ENST00000454134 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.8■■□□□ 1.56
NCKIPSD-208ENST00000454134 RBM33Q96EV2 1170 aaKnown RBP24.8■■□□□ 1.56
NCKIPSD-208ENST00000454134 PROSER2Q86WR7 435 aaPredicted RBP24.78■■□□□ 1.56
NCKIPSD-208ENST00000454134 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
NCKIPSD-208ENST00000454134 NWD1Q149M9 1564 aa24.76■■□□□ 1.55
NCKIPSD-208ENST00000454134 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
NCKIPSD-208ENST00000454134 NKTRP30414 1462 aaKnown RBP24.73■■□□□ 1.55
NCKIPSD-208ENST00000454134 ADAMTS13Q76LX8 1427 aa24.73■■□□□ 1.55
NCKIPSD-208ENST00000454134 TBX22Q9Y458 520 aa24.73■■□□□ 1.55
NCKIPSD-208ENST00000454134 TRPM2O94759 1503 aa24.72■■□□□ 1.55
NCKIPSD-208ENST00000454134 ZNF326Q5BKZ1 582 aaKnown RBP24.72■■□□□ 1.55
NCKIPSD-208ENST00000454134 CHD2O14647 1828 aaKnown RBP24.71■■□□□ 1.55
NCKIPSD-208ENST00000454134 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
NCKIPSD-208ENST00000454134 DIP2AQ14689 1571 aa24.67■■□□□ 1.54
NCKIPSD-208ENST00000454134 ILDR2Q71H61 639 aa24.66■■□□□ 1.54
NCKIPSD-208ENST00000454134 FOXD1Q16676 465 aa24.64■■□□□ 1.54
NCKIPSD-208ENST00000454134 KIF1BO60333 1816 aa24.63■■□□□ 1.53
NCKIPSD-208ENST00000454134 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
NCKIPSD-208ENST00000454134 NRXN3Q9Y4C0 1643 aa24.62■■□□□ 1.53
NCKIPSD-208ENST00000454134 MSH6P52701 1360 aa24.62■■□□□ 1.53
NCKIPSD-208ENST00000454134 PIK3R4Q99570 1358 aa24.61■■□□□ 1.53
NCKIPSD-208ENST00000454134 PTPRUQ92729 1446 aa24.61■■□□□ 1.53
NCKIPSD-208ENST00000454134 SETBP1Q9Y6X0 1596 aa24.6■■□□□ 1.53
NCKIPSD-208ENST00000454134 AMOTL2Q9Y2J4 779 aa24.59■■□□□ 1.53
NCKIPSD-208ENST00000454134 FAM135BQ49AJ0 1406 aa24.59■■□□□ 1.53
NCKIPSD-208ENST00000454134 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
NCKIPSD-208ENST00000454134 C14orf37Q86TY3 774 aa24.58■■□□□ 1.53
NCKIPSD-208ENST00000454134 MPHOSPH9Q99550 1183 aa24.56■■□□□ 1.52
NCKIPSD-208ENST00000454134 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
NCKIPSD-208ENST00000454134 METP08581 1390 aa24.55■■□□□ 1.52
NCKIPSD-208ENST00000454134 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
NCKIPSD-208ENST00000454134 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
NCKIPSD-208ENST00000454134 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
NCKIPSD-208ENST00000454134 XRN1Q8IZH2 1706 aaKnown RBP24.52■■□□□ 1.52
NCKIPSD-208ENST00000454134 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
NCKIPSD-208ENST00000454134 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.49■■□□□ 1.51
NCKIPSD-208ENST00000454134 C19orf44Q9H6X5 657 aa24.49■■□□□ 1.51
NCKIPSD-208ENST00000454134 CCDC144AA2RUR9 1427 aa24.48■■□□□ 1.51
NCKIPSD-208ENST00000454134 RPGRIP1LQ68CZ1 1315 aa24.48■■□□□ 1.51
NCKIPSD-208ENST00000454134 ATF3P18847 181 aa24.46■■□□□ 1.51
NCKIPSD-208ENST00000454134 PPLO60437 1756 aa24.46■■□□□ 1.51
NCKIPSD-208ENST00000454134 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.5
NCKIPSD-208ENST00000454134 RGL3Q3MIN7 710 aa24.45■■□□□ 1.5
NCKIPSD-208ENST00000454134 CADPS2Q86UW7 1296 aa24.45■■□□□ 1.5
NCKIPSD-208ENST00000454134 PHF23Q9BUL5 403 aaPredicted RBP24.43■■□□□ 1.5
NCKIPSD-208ENST00000454134 SETD1AO15047 1707 aaKnown RBP24.42■■□□□ 1.5
NCKIPSD-208ENST00000454134 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
NCKIPSD-208ENST00000454134 PHLPP1O60346 1717 aa24.41■■□□□ 1.5
NCKIPSD-208ENST00000454134 ACIN1Q9UKV3 1341 aaKnown RBP24.4■■□□□ 1.5
NCKIPSD-208ENST00000454134 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.5
NCKIPSD-208ENST00000454134 SOCS7O14512 581 aa24.39■■□□□ 1.49
NCKIPSD-208ENST00000454134 DCCP43146 1447 aa24.36■■□□□ 1.49
NCKIPSD-208ENST00000454134 ROBO2Q9HCK4 1378 aa24.35■■□□□ 1.49
NCKIPSD-208ENST00000454134 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
NCKIPSD-208ENST00000454134 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
NCKIPSD-208ENST00000454134 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
NCKIPSD-208ENST00000454134 IFT172Q9UG01 1749 aa24.34■■□□□ 1.49
NCKIPSD-208ENST00000454134 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
NCKIPSD-208ENST00000454134 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
NCKIPSD-208ENST00000454134 MST1RQ04912 1400 aa24.33■■□□□ 1.49
NCKIPSD-208ENST00000454134 PTCH1Q13635 1447 aa24.33■■□□□ 1.49
NCKIPSD-208ENST00000454134 JCADQ9P266 1359 aa24.3■■□□□ 1.48
NCKIPSD-208ENST00000454134 AHDC1Q5TGY3 1603 aaPredicted RBP24.3■■□□□ 1.48
NCKIPSD-208ENST00000454134 RGS17Q9UGC6 210 aaPredicted RBP24.29■■□□□ 1.48
NCKIPSD-208ENST00000454134 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
NCKIPSD-208ENST00000454134 PRAG1Q86YV5 1406 aa24.27■■□□□ 1.48
NCKIPSD-208ENST00000454134 STK26Q9P289 416 aa24.27■■□□□ 1.48
NCKIPSD-208ENST00000454134 TMEM132EQ6IEE7 984 aa24.26■■□□□ 1.47
NCKIPSD-208ENST00000454134 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
NCKIPSD-208ENST00000454134 DDX17Q92841 729 aaKnown RBP24.23■■□□□ 1.47
NCKIPSD-208ENST00000454134 C1orf167Q5SNV9 1468 aa24.21■■□□□ 1.47
NCKIPSD-208ENST00000454134 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
NCKIPSD-208ENST00000454134 HRCP23327 699 aa24.21■■□□□ 1.47
NCKIPSD-208ENST00000454134 WAPLQ7Z5K2 1190 aa24.2■■□□□ 1.46
NCKIPSD-208ENST00000454134 NHSL1Q5SYE7 1610 aa24.2■■□□□ 1.46
NCKIPSD-208ENST00000454134 LRP6O75581 1613 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 CFAP70Q5T0N1 1121 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 MYOM2P54296 1465 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 NRXN1Q9ULB1 1477 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 TECPR2O15040 1411 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
NCKIPSD-208ENST00000454134 SPATA31A6Q5VVP1 1343 aa24.17■■□□□ 1.46
NCKIPSD-208ENST00000454134 ORAI2Q96SN7 254 aa24.17■■□□□ 1.46
NCKIPSD-208ENST00000454134 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
NCKIPSD-208ENST00000454134 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
NCKIPSD-208ENST00000454134 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms