RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 CHMP5Q9NZZ3 219 aa9.59□□□□□ -0.87
RIF1-206ENST00000453091 ST18O60284 1047 aa9.59□□□□□ -0.87
RIF1-206ENST00000453091 TERF2IPQ9NYB0 399 aa9.59□□□□□ -0.87
RIF1-206ENST00000453091 HDGFP51858 240 aaKnown RBP9.59□□□□□ -0.87
RIF1-206ENST00000453091 TSR2Q969E8 191 aaKnown RBP9.59□□□□□ -0.87
RIF1-206ENST00000453091 SYAP1Q96A49 352 aaPredicted RBP9.58□□□□□ -0.88
RIF1-206ENST00000453091 C20orf194Q5TEA3 1177 aa9.58□□□□□ -0.88
RIF1-206ENST00000453091 NRDCO43847 1150 aa9.58□□□□□ -0.88
RIF1-206ENST00000453091 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
RIF1-206ENST00000453091 EIF3AQ14152 1382 aaKnown RBP9.57□□□□□ -0.88
RIF1-206ENST00000453091 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
RIF1-206ENST00000453091 PTMSP20962 102 aa9.57□□□□□ -0.88
RIF1-206ENST00000453091 ARAP1Q96P48 1450 aa9.57□□□□□ -0.88
RIF1-206ENST00000453091 NESP48681 1621 aa9.57□□□□□ -0.88
RIF1-206ENST00000453091 CLSTN1O94985 981 aa9.57□□□□□ -0.88
RIF1-206ENST00000453091 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
RIF1-206ENST00000453091 BACH2Q9BYV9 841 aa9.56□□□□□ -0.88
RIF1-206ENST00000453091 HMMRO75330 724 aa9.56□□□□□ -0.88
RIF1-206ENST00000453091 TOMM22Q9NS69 142 aa9.56□□□□□ -0.88
RIF1-206ENST00000453091 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
RIF1-206ENST00000453091 TRAK2O60296 914 aa9.55□□□□□ -0.88
RIF1-206ENST00000453091 CCAR2Q8N163 923 aaKnown RBP9.55□□□□□ -0.88
RIF1-206ENST00000453091 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
RIF1-206ENST00000453091 SMARCA4P51532 1647 aa9.55□□□□□ -0.88
RIF1-206ENST00000453091 GORABQ5T7V8 394 aa9.55□□□□□ -0.88
RIF1-206ENST00000453091 COG3Q96JB2 828 aa9.55□□□□□ -0.88
RIF1-206ENST00000453091 FAM69CQ0P6D2 419 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 FAM43AQ8N2R8 423 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 UACAQ9BZF9 1416 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 KIF16BQ96L93 1317 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 EID1Q9Y6B2 187 aa9.54□□□□□ -0.88
RIF1-206ENST00000453091 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
RIF1-206ENST00000453091 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
RIF1-206ENST00000453091 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
RIF1-206ENST00000453091 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
RIF1-206ENST00000453091 TAF7LQ5H9L4 462 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 DDX19BQ9UMR2 479 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 TNNT3P45378 269 aaPredicted RBP9.53□□□□□ -0.88
RIF1-206ENST00000453091 RUNDC1Q96C34 613 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
RIF1-206ENST00000453091 ZNF771Q7L3S4 317 aaPredicted RBP9.52□□□□□ -0.88
RIF1-206ENST00000453091 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.89
RIF1-206ENST00000453091 PNISRQ8TF01 805 aaKnown RBP9.52□□□□□ -0.89
RIF1-206ENST00000453091 A0A0U1RQG5 324 aaPredicted RBP9.52□□□□□ -0.89
RIF1-206ENST00000453091 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
RIF1-206ENST00000453091 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.52□□□□□ -0.89
RIF1-206ENST00000453091 MAP4K4O95819 1239 aaPredicted RBP9.51□□□□□ -0.89
RIF1-206ENST00000453091 H3BQV1 296 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 MTHFSP49914 203 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 SYTL4Q96C24 671 aaPredicted RBP9.51□□□□□ -0.89
RIF1-206ENST00000453091 SKOR2Q2VWA4 1001 aaPredicted RBP9.51□□□□□ -0.89
RIF1-206ENST00000453091 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 CFAP44Q96MT7 982 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 SLC12A5Q9H2X9 1139 aa9.51□□□□□ -0.89
RIF1-206ENST00000453091 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
RIF1-206ENST00000453091 RBM33Q96EV2 1170 aaKnown RBP9.51□□□□□ -0.89
RIF1-206ENST00000453091 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
RIF1-206ENST00000453091 MYOM3Q5VTT5 1437 aa9.5□□□□□ -0.89
RIF1-206ENST00000453091 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
RIF1-206ENST00000453091 PRG4Q92954 1404 aaPredicted RBP9.5□□□□□ -0.89
RIF1-206ENST00000453091 NOB1Q9ULX3 412 aaKnown RBP9.5□□□□□ -0.89
RIF1-206ENST00000453091 CFTRP13569 1480 aa9.5□□□□□ -0.89
RIF1-206ENST00000453091 EVC2Q86UK5 1308 aa9.5□□□□□ -0.89
RIF1-206ENST00000453091 NCOA2Q15596 1464 aa9.49□□□□□ -0.89
RIF1-206ENST00000453091 NASPP49321 788 aaPredicted RBP9.49□□□□□ -0.89
RIF1-206ENST00000453091 PES1O00541 588 aaKnown RBP9.49□□□□□ -0.89
RIF1-206ENST00000453091 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
RIF1-206ENST00000453091 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
RIF1-206ENST00000453091 FKBP5Q13451 457 aaPredicted RBP9.49□□□□□ -0.89
RIF1-206ENST00000453091 DIAPH3Q9NSV4 1193 aa9.49□□□□□ -0.89
RIF1-206ENST00000453091 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
RIF1-206ENST00000453091 XPCQ01831 940 aaPredicted RBP9.48□□□□□ -0.89
RIF1-206ENST00000453091 BICD2Q8TD16 824 aa9.48□□□□□ -0.89
RIF1-206ENST00000453091 BRD4O60885 1362 aaPredicted RBP9.48□□□□□ -0.89
RIF1-206ENST00000453091 MRE11P49959 708 aa9.48□□□□□ -0.89
RIF1-206ENST00000453091 GPATCH3Q96I76 525 aa9.48□□□□□ -0.89
RIF1-206ENST00000453091 RASSF8Q8NHQ8 419 aa9.48□□□□□ -0.89
RIF1-206ENST00000453091 BECN2A8MW95 431 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
RIF1-206ENST00000453091 TPM4P67936 248 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 SPC24Q8NBT2 197 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 CDC45O75419 566 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 RAPGEF3O95398 923 aa9.47□□□□□ -0.89
RIF1-206ENST00000453091 OSCARQ8IYS5 282 aa9.46□□□□□ -0.89
RIF1-206ENST00000453091 STK11IPQ8N1F8 1099 aa9.46□□□□□ -0.89
RIF1-206ENST00000453091 TSPYL4Q9UJ04 414 aa9.46□□□□□ -0.89
RIF1-206ENST00000453091 PHF14O94880 888 aa9.46□□□□□ -0.89
RIF1-206ENST00000453091 SMG6Q86US8 1419 aaKnown RBP9.46□□□□□ -0.9
RIF1-206ENST00000453091 PRAM1Q96QH2 718 aa9.46□□□□□ -0.9
RIF1-206ENST00000453091 IFT57Q9NWB7 429 aa9.46□□□□□ -0.9
RIF1-206ENST00000453091 ANKRD50Q9ULJ7 1429 aa9.46□□□□□ -0.9
RIF1-206ENST00000453091 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 CSPP1Q1MSJ5 1256 aa9.45□□□□□ -0.9
RIF1-206ENST00000453091 RSPH4AQ5TD94 716 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms