RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LOC105371045A0A1W2PR82 267 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 SOWAHBA6NEL2 793 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 FECHP22830 423 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 PTPN5P54829 565 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 FAM161AQ3B820 660 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 LRCH3Q96II8 777 aa7.14□□□□□ -1.27
HMGB3P21-201ENST00000452483 PDIA4P13667 645 aaKnown RBP7.13□□□□□ -1.27
HMGB3P21-201ENST00000452483 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
HMGB3P21-201ENST00000452483 RBM46Q8TBY0 533 aaKnown RBP7.13□□□□□ -1.27
HMGB3P21-201ENST00000452483 EYA1Q99502 592 aa7.13□□□□□ -1.27
HMGB3P21-201ENST00000452483 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P21-201ENST00000452483 SHROOM4Q9ULL8 1493 aa7.11□□□□□ -1.27
HMGB3P21-201ENST00000452483 DNAJB2P25686 324 aa7.11□□□□□ -1.27
HMGB3P21-201ENST00000452483 HPS5Q9UPZ3 1129 aa7.11□□□□□ -1.27
HMGB3P21-201ENST00000452483 RNF40O75150 1001 aa7.1□□□□□ -1.27
HMGB3P21-201ENST00000452483 SWT1Q5T5J6 900 aaKnown RBP7.1□□□□□ -1.27
HMGB3P21-201ENST00000452483 METTL3Q86U44 580 aaKnown RBP7.1□□□□□ -1.27
HMGB3P21-201ENST00000452483 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
HMGB3P21-201ENST00000452483 OATP04181 439 aa7.09□□□□□ -1.27
HMGB3P21-201ENST00000452483 HDGFP51858 240 aaKnown RBP7.09□□□□□ -1.27
HMGB3P21-201ENST00000452483 MAP2K5Q13163 448 aa7.09□□□□□ -1.27
HMGB3P21-201ENST00000452483 WBP1LQ9NX94 342 aa7.09□□□□□ -1.27
HMGB3P21-201ENST00000452483 TSR3Q9UJK0 312 aaKnown RBP7.09□□□□□ -1.27
HMGB3P21-201ENST00000452483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.08□□□□□ -1.28
HMGB3P21-201ENST00000452483 RCCD1A6NED2 376 aa7.08□□□□□ -1.28
HMGB3P21-201ENST00000452483 TMEM134Q9H6X4 195 aa7.08□□□□□ -1.28
HMGB3P21-201ENST00000452483 HMGB1P09429 215 aaKnown RBP7.07□□□□□ -1.28
HMGB3P21-201ENST00000452483 NYAP1Q6ZVC0 841 aa7.07□□□□□ -1.28
HMGB3P21-201ENST00000452483 SLF2Q8IX21 1173 aa7.07□□□□□ -1.28
HMGB3P21-201ENST00000452483 SLC4A3P48751 1232 aa7.06□□□□□ -1.28
HMGB3P21-201ENST00000452483 CDK11BP21127 795 aaKnown RBP7.05□□□□□ -1.28
HMGB3P21-201ENST00000452483 PPP4CP60510 307 aa7.05□□□□□ -1.28
HMGB3P21-201ENST00000452483 ZC3H15Q8WU90 426 aaKnown RBP7.05□□□□□ -1.28
HMGB3P21-201ENST00000452483 NECTIN2Q92692 538 aa7.05□□□□□ -1.28
HMGB3P21-201ENST00000452483 CDK11AQ9UQ88 783 aaPredicted RBP7.05□□□□□ -1.28
HMGB3P21-201ENST00000452483 CCDC102AQ96A19 550 aa7.04□□□□□ -1.28
HMGB3P21-201ENST00000452483 PHOX2BQ99453 314 aa7.04□□□□□ -1.28
HMGB3P21-201ENST00000452483 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P21-201ENST00000452483 IRF6O14896 467 aa7.03□□□□□ -1.28
HMGB3P21-201ENST00000452483 ZMYND10O75800 440 aa7.03□□□□□ -1.28
HMGB3P21-201ENST00000452483 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
HMGB3P21-201ENST00000452483 PLA2G2EQ9NZK7 142 aa7.03□□□□□ -1.28
HMGB3P21-201ENST00000452483 C1orf115Q9H7X2 142 aa7.02□□□□□ -1.29
HMGB3P21-201ENST00000452483 APLP1P51693 650 aa7.01□□□□□ -1.29
HMGB3P21-201ENST00000452483 BARGINQ6ZT62 677 aa7.01□□□□□ -1.29
HMGB3P21-201ENST00000452483 IGSF3O75054 1194 aa7□□□□□ -1.29
HMGB3P21-201ENST00000452483 ITGBL1O95965 494 aaPredicted RBP7□□□□□ -1.29
HMGB3P21-201ENST00000452483 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
HMGB3P21-201ENST00000452483 CFHP08603 1231 aa6.99□□□□□ -1.29
HMGB3P21-201ENST00000452483 KRI1Q8N9T8 703 aaKnown RBP6.99□□□□□ -1.29
HMGB3P21-201ENST00000452483 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
HMGB3P21-201ENST00000452483 SLC10A3P09131 477 aa6.98□□□□□ -1.29
HMGB3P21-201ENST00000452483 HSP90B1P14625 803 aaKnown RBP6.98□□□□□ -1.29
HMGB3P21-201ENST00000452483 KCTD17Q8N5Z5 321 aa6.98□□□□□ -1.29
HMGB3P21-201ENST00000452483 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
HMGB3P21-201ENST00000452483 APBB1O00213 710 aa6.97□□□□□ -1.29
HMGB3P21-201ENST00000452483 KMT5BQ4FZB7 885 aa6.97□□□□□ -1.29
HMGB3P21-201ENST00000452483 SULF1Q8IWU6 871 aa6.97□□□□□ -1.29
HMGB3P21-201ENST00000452483 RDH13Q8NBN7 331 aa6.97□□□□□ -1.29
HMGB3P21-201ENST00000452483 DDX11L8A8MPP1 907 aa6.96□□□□□ -1.3
HMGB3P21-201ENST00000452483 MDM2Q00987 491 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P21-201ENST00000452483 IFFO2Q5TF58 517 aa6.96□□□□□ -1.3
HMGB3P21-201ENST00000452483 MTRQ99707 1265 aa6.96□□□□□ -1.3
HMGB3P21-201ENST00000452483 RAD21O60216 631 aa6.95□□□□□ -1.3
HMGB3P21-201ENST00000452483 KCNC4Q03721 635 aa6.95□□□□□ -1.3
HMGB3P21-201ENST00000452483 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
HMGB3P21-201ENST00000452483 GPCPD1Q9NPB8 672 aa6.95□□□□□ -1.3
HMGB3P21-201ENST00000452483 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
HMGB3P21-201ENST00000452483 CLCN1P35523 988 aa6.94□□□□□ -1.3
HMGB3P21-201ENST00000452483 TJAP1Q5JTD0 557 aa6.94□□□□□ -1.3
HMGB3P21-201ENST00000452483 IL21Q9HBE4 155 aa6.94□□□□□ -1.3
HMGB3P21-201ENST00000452483 PCDHB3Q9Y5E6 796 aa6.94□□□□□ -1.3
HMGB3P21-201ENST00000452483 COPS2P61201 443 aa6.93□□□□□ -1.3
HMGB3P21-201ENST00000452483 AMHR2Q16671 573 aa6.93□□□□□ -1.3
HMGB3P21-201ENST00000452483 TTLL12Q14166 644 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P21-201ENST00000452483 BLOC1S3Q6QNY0 202 aa6.92□□□□□ -1.3
HMGB3P21-201ENST00000452483 A0A0G2JS52 829 aa6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 RGS20O76081 388 aa6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 CD46P15529 392 aa6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 AK7Q96M32 723 aa6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P21-201ENST00000452483 TRIM66O15016 1216 aa6.9□□□□□ -1.3
HMGB3P21-201ENST00000452483 GCGRP47871 477 aa6.9□□□□□ -1.3
HMGB3P21-201ENST00000452483 ZNF516Q92618 1163 aa6.9□□□□□ -1.3
HMGB3P21-201ENST00000452483 REPIN1Q9BWE0 567 aaKnown RBP6.9□□□□□ -1.3
HMGB3P21-201ENST00000452483 ZPR1O75312 459 aa6.89□□□□□ -1.31
HMGB3P21-201ENST00000452483 FUT2Q10981 343 aa6.89□□□□□ -1.31
HMGB3P21-201ENST00000452483 GIGYF2Q6Y7W6 1299 aaKnown RBP6.89□□□□□ -1.31
HMGB3P21-201ENST00000452483 TLL1O43897 1013 aa6.88□□□□□ -1.31
HMGB3P21-201ENST00000452483 PUS10Q3MIT2 529 aaKnown RBP6.88□□□□□ -1.31
HMGB3P21-201ENST00000452483 PARP9Q8IXQ6 854 aa6.88□□□□□ -1.31
HMGB3P21-201ENST00000452483 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
HMGB3P21-201ENST00000452483 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
HMGB3P21-201ENST00000452483 NR1I2O75469 434 aa6.87□□□□□ -1.31
HMGB3P21-201ENST00000452483 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
HMGB3P21-201ENST00000452483 IRX2Q9BZI1 471 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P21-201ENST00000452483 RBM25P49756 843 aaKnown RBP6.86□□□□□ -1.31
HMGB3P21-201ENST00000452483 AEBP1Q8IUX7 1158 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms