RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 NAIPQ13075 1403 aa23.8■■□□□ 1.4
TTC38-205ENST00000451998 DISP3Q9P2K9 1392 aa23.79■■□□□ 1.4
TTC38-205ENST00000451998 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
TTC38-205ENST00000451998 TMEM131LA2VDJ0 1609 aa23.77■■□□□ 1.4
TTC38-205ENST00000451998 ZFYVE9O95405 1425 aa23.76■■□□□ 1.39
TTC38-205ENST00000451998 HSPA1LP34931 641 aa23.76■■□□□ 1.39
TTC38-205ENST00000451998 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
TTC38-205ENST00000451998 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
TTC38-205ENST00000451998 MYO5BQ9ULV0 1848 aa23.75■■□□□ 1.39
TTC38-205ENST00000451998 KCNA6P17658 529 aa23.73■■□□□ 1.39
TTC38-205ENST00000451998 PLEKHG1Q9ULL1 1385 aa23.73■■□□□ 1.39
TTC38-205ENST00000451998 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
TTC38-205ENST00000451998 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.72■■□□□ 1.39
TTC38-205ENST00000451998 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
TTC38-205ENST00000451998 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
TTC38-205ENST00000451998 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
TTC38-205ENST00000451998 ALKQ9UM73 1620 aa23.7■■□□□ 1.38
TTC38-205ENST00000451998 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
TTC38-205ENST00000451998 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
TTC38-205ENST00000451998 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
TTC38-205ENST00000451998 NWD1Q149M9 1564 aa23.62■■□□□ 1.37
TTC38-205ENST00000451998 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
TTC38-205ENST00000451998 TRPM2O94759 1503 aa23.61■■□□□ 1.37
TTC38-205ENST00000451998 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
TTC38-205ENST00000451998 ADAMTS13Q76LX8 1427 aa23.6■■□□□ 1.37
TTC38-205ENST00000451998 TBX22Q9Y458 520 aa23.6■■□□□ 1.37
TTC38-205ENST00000451998 XIRP1Q702N8 1843 aaKnown RBP23.59■■□□□ 1.37
TTC38-205ENST00000451998 FOXD1Q16676 465 aa23.59■■□□□ 1.37
TTC38-205ENST00000451998 MSH6P52701 1360 aa23.58■■□□□ 1.37
TTC38-205ENST00000451998 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
TTC38-205ENST00000451998 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
TTC38-205ENST00000451998 AMOTL2Q9Y2J4 779 aa23.51■■□□□ 1.35
TTC38-205ENST00000451998 MED1Q15648 1581 aaPredicted RBP23.51■■□□□ 1.35
TTC38-205ENST00000451998 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
TTC38-205ENST00000451998 PTPRUQ92729 1446 aa23.5■■□□□ 1.35
TTC38-205ENST00000451998 NEXMIFQ5QGS0 1516 aa23.49■■□□□ 1.35
TTC38-205ENST00000451998 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
TTC38-205ENST00000451998 MPHOSPH9Q99550 1183 aa23.47■■□□□ 1.35
TTC38-205ENST00000451998 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
TTC38-205ENST00000451998 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
TTC38-205ENST00000451998 SETBP1Q9Y6X0 1596 aa23.47■■□□□ 1.35
TTC38-205ENST00000451998 NRXN3Q9Y4C0 1643 aa23.47■■□□□ 1.35
TTC38-205ENST00000451998 KIF1BO60333 1816 aa23.46■■□□□ 1.35
TTC38-205ENST00000451998 METP08581 1390 aa23.45■■□□□ 1.34
TTC38-205ENST00000451998 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
TTC38-205ENST00000451998 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
TTC38-205ENST00000451998 CCDC144AA2RUR9 1427 aa23.44■■□□□ 1.34
TTC38-205ENST00000451998 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
TTC38-205ENST00000451998 ATF3P18847 181 aa23.43■■□□□ 1.34
TTC38-205ENST00000451998 VGFO15240 615 aaPredicted RBP23.41■■□□□ 1.34
TTC38-205ENST00000451998 RGL3Q3MIN7 710 aa23.41■■□□□ 1.34
TTC38-205ENST00000451998 C19orf44Q9H6X5 657 aa23.39■■□□□ 1.33
TTC38-205ENST00000451998 NCOA3Q9Y6Q9 1424 aa23.39■■□□□ 1.33
TTC38-205ENST00000451998 RAB3GAP2Q9H2M9 1393 aa23.39■■□□□ 1.33
TTC38-205ENST00000451998 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
TTC38-205ENST00000451998 XRN1Q8IZH2 1706 aaKnown RBP23.38■■□□□ 1.33
TTC38-205ENST00000451998 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
TTC38-205ENST00000451998 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
TTC38-205ENST00000451998 ADGRF5Q8IZF2 1346 aa23.31■■□□□ 1.32
TTC38-205ENST00000451998 PHLPP1O60346 1717 aa23.3■■□□□ 1.32
TTC38-205ENST00000451998 SOCS7O14512 581 aa23.3■■□□□ 1.32
TTC38-205ENST00000451998 PPLO60437 1756 aa23.29■■□□□ 1.32
TTC38-205ENST00000451998 SPATA31E1Q6ZUB1 1445 aa23.29■■□□□ 1.32
TTC38-205ENST00000451998 ADGRL3Q9HAR2 1447 aa23.28■■□□□ 1.32
TTC38-205ENST00000451998 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
TTC38-205ENST00000451998 DCCP43146 1447 aa23.27■■□□□ 1.32
TTC38-205ENST00000451998 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
TTC38-205ENST00000451998 BRINP3Q76B58 766 aa23.26■■□□□ 1.31
TTC38-205ENST00000451998 STK26Q9P289 416 aa23.26■■□□□ 1.31
TTC38-205ENST00000451998 ANKRD30BQ9BXX2 1392 aa23.25■■□□□ 1.31
TTC38-205ENST00000451998 JCADQ9P266 1359 aa23.25■■□□□ 1.31
TTC38-205ENST00000451998 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
TTC38-205ENST00000451998 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
TTC38-205ENST00000451998 MST1RQ04912 1400 aa23.24■■□□□ 1.31
TTC38-205ENST00000451998 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
TTC38-205ENST00000451998 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
TTC38-205ENST00000451998 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
TTC38-205ENST00000451998 TMEM132EQ6IEE7 984 aa23.2■■□□□ 1.3
TTC38-205ENST00000451998 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
TTC38-205ENST00000451998 DDX17Q92841 729 aaKnown RBP23.19■■□□□ 1.3
TTC38-205ENST00000451998 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
TTC38-205ENST00000451998 PIK3C2GO75747 1445 aa23.17■■□□□ 1.3
TTC38-205ENST00000451998 RGS17Q9UGC6 210 aaPredicted RBP23.16■■□□□ 1.3
TTC38-205ENST00000451998 IFT172Q9UG01 1749 aa23.16■■□□□ 1.3
TTC38-205ENST00000451998 NUTM2BA6NNL0 878 aaPredicted RBP23.15■■□□□ 1.3
TTC38-205ENST00000451998 NUTM2EB1AL46 878 aaPredicted RBP23.15■■□□□ 1.3
TTC38-205ENST00000451998 NUTM2AQ8IVF1 878 aaPredicted RBP23.15■■□□□ 1.3
TTC38-205ENST00000451998 C1orf167Q5SNV9 1468 aa23.14■■□□□ 1.29
TTC38-205ENST00000451998 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
TTC38-205ENST00000451998 LRPPRCP42704 1394 aaKnown RBP23.14■■□□□ 1.29
TTC38-205ENST00000451998 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
TTC38-205ENST00000451998 LRP6O75581 1613 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 NUTM2FA1L443 756 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 CFAP70Q5T0N1 1121 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 ORAI2Q96SN7 254 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 KDM2AQ9Y2K7 1162 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 PLEKHH1Q9ULM0 1364 aa23.11■■□□□ 1.29
TTC38-205ENST00000451998 SPATA31A6Q5VVP1 1343 aa23.1■■□□□ 1.29
TTC38-205ENST00000451998 MYOM2P54296 1465 aa23.1■■□□□ 1.29
TTC38-205ENST00000451998 YTHDC2Q9H6S0 1430 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms