RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 PLPPR3Q6T4P5 718 aa11.6□□□□□ -0.55
NECAP1-202ENST00000450991 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
NECAP1-202ENST00000450991 MYOM2P54296 1465 aa11.6□□□□□ -0.55
NECAP1-202ENST00000450991 NBPF1Q3BBV0 1214 aa11.59□□□□□ -0.55
NECAP1-202ENST00000450991 ZMYM3Q14202 1370 aa11.59□□□□□ -0.55
NECAP1-202ENST00000450991 NUTM2DQ5VT03 806 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-202ENST00000450991 CARD11Q9BXL7 1154 aa11.59□□□□□ -0.55
NECAP1-202ENST00000450991 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
NECAP1-202ENST00000450991 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
NECAP1-202ENST00000450991 ERVK-7P63135 1459 aa11.58□□□□□ -0.56
NECAP1-202ENST00000450991 C11orf95C9JLR9 678 aaPredicted RBP11.58□□□□□ -0.56
NECAP1-202ENST00000450991 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
NECAP1-202ENST00000450991 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
NECAP1-202ENST00000450991 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-202ENST00000450991 SENP3Q9H4L4 574 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-202ENST00000450991 ADGRF5Q8IZF2 1346 aa11.57□□□□□ -0.56
NECAP1-202ENST00000450991 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
NECAP1-202ENST00000450991 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
NECAP1-202ENST00000450991 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
NECAP1-202ENST00000450991 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
NECAP1-202ENST00000450991 SPATA31D1Q6ZQQ2 1576 aa11.54□□□□□ -0.56
NECAP1-202ENST00000450991 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
NECAP1-202ENST00000450991 NEXMIFQ5QGS0 1516 aa11.54□□□□□ -0.56
NECAP1-202ENST00000450991 CFAP70Q5T0N1 1121 aa11.52□□□□□ -0.56
NECAP1-202ENST00000450991 SETBP1Q9Y6X0 1596 aa11.52□□□□□ -0.57
NECAP1-202ENST00000450991 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
NECAP1-202ENST00000450991 TNRQ92752 1358 aa11.51□□□□□ -0.57
NECAP1-202ENST00000450991 MYO3AQ8NEV4 1616 aa11.51□□□□□ -0.57
NECAP1-202ENST00000450991 PIK3C2GO75747 1445 aa11.5□□□□□ -0.57
NECAP1-202ENST00000450991 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
NECAP1-202ENST00000450991 POLR3GLQ9BT43 218 aa11.49□□□□□ -0.57
NECAP1-202ENST00000450991 SCAF11Q99590 1463 aaKnown RBP11.49□□□□□ -0.57
NECAP1-202ENST00000450991 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
NECAP1-202ENST00000450991 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
NECAP1-202ENST00000450991 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-202ENST00000450991 ANP32CO43423 234 aa11.47□□□□□ -0.57
NECAP1-202ENST00000450991 TMEM132EQ6IEE7 984 aa11.47□□□□□ -0.57
NECAP1-202ENST00000450991 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
NECAP1-202ENST00000450991 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
NECAP1-202ENST00000450991 ZFYVE9O95405 1425 aa11.46□□□□□ -0.57
NECAP1-202ENST00000450991 C3P01024 1663 aa11.46□□□□□ -0.57
NECAP1-202ENST00000450991 TESK2Q96S53 571 aa11.46□□□□□ -0.57
NECAP1-202ENST00000450991 C14orf93Q9H972 538 aaKnown RBP11.46□□□□□ -0.58
NECAP1-202ENST00000450991 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.58
NECAP1-202ENST00000450991 MYOM1P52179 1685 aa11.45□□□□□ -0.58
NECAP1-202ENST00000450991 QRICH2Q9H0J4 1663 aa11.45□□□□□ -0.58
NECAP1-202ENST00000450991 CCER2I3L3R5 266 aa11.45□□□□□ -0.58
NECAP1-202ENST00000450991 UBR1Q8IWV7 1749 aa11.44□□□□□ -0.58
NECAP1-202ENST00000450991 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
NECAP1-202ENST00000450991 DISP3Q9P2K9 1392 aa11.44□□□□□ -0.58
NECAP1-202ENST00000450991 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
NECAP1-202ENST00000450991 TRAK1Q9UPV9 953 aa11.43□□□□□ -0.58
NECAP1-202ENST00000450991 YTHDC1Q96MU7 727 aaKnown RBP11.43□□□□□ -0.58
NECAP1-202ENST00000450991 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
NECAP1-202ENST00000450991 ASXL1Q8IXJ9 1541 aa11.42□□□□□ -0.58
NECAP1-202ENST00000450991 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
NECAP1-202ENST00000450991 STK26Q9P289 416 aa11.41□□□□□ -0.58
NECAP1-202ENST00000450991 BCANQ96GW7 911 aa11.4□□□□□ -0.58
NECAP1-202ENST00000450991 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.58
NECAP1-202ENST00000450991 NLRP1Q9C000 1473 aa11.4□□□□□ -0.58
NECAP1-202ENST00000450991 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
NECAP1-202ENST00000450991 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-202ENST00000450991 ALKQ9UM73 1620 aa11.39□□□□□ -0.59
NECAP1-202ENST00000450991 LTKP29376 864 aa11.39□□□□□ -0.59
NECAP1-202ENST00000450991 TMF1P82094 1093 aa11.39□□□□□ -0.59
NECAP1-202ENST00000450991 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
NECAP1-202ENST00000450991 ADAMTSL3P82987 1691 aa11.39□□□□□ -0.59
NECAP1-202ENST00000450991 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.38□□□□□ -0.59
NECAP1-202ENST00000450991 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
NECAP1-202ENST00000450991 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
NECAP1-202ENST00000450991 CNGB1Q14028 1251 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-202ENST00000450991 TXNDC2Q86VQ3 553 aa11.37□□□□□ -0.59
NECAP1-202ENST00000450991 CENPJQ9HC77 1338 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-202ENST00000450991 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
NECAP1-202ENST00000450991 PTPRMP28827 1452 aa11.35□□□□□ -0.59
NECAP1-202ENST00000450991 THEMISQ8N1K5 641 aaPredicted RBP11.35□□□□□ -0.59
NECAP1-202ENST00000450991 KNDC1Q76NI1 1749 aa11.34□□□□□ -0.59
NECAP1-202ENST00000450991 EID1Q9Y6B2 187 aa11.34□□□□□ -0.59
NECAP1-202ENST00000450991 METP08581 1390 aa11.34□□□□□ -0.59
NECAP1-202ENST00000450991 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
NECAP1-202ENST00000450991 YTHDC2Q9H6S0 1430 aaKnown RBP11.33□□□□□ -0.6
NECAP1-202ENST00000450991 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-202ENST00000450991 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
NECAP1-202ENST00000450991 PRAM1Q96QH2 718 aa11.33□□□□□ -0.6
NECAP1-202ENST00000450991 KTN1Q86UP2 1357 aaKnown RBP11.32□□□□□ -0.6
NECAP1-202ENST00000450991 CEP170BQ9Y4F5 1589 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-202ENST00000450991 TULP4Q9NRJ4 1543 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 PLEKHG1Q9ULL1 1385 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 DLC1Q96QB1 1528 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 POGKQ9P215 609 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
NECAP1-202ENST00000450991 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
NECAP1-202ENST00000450991 ARXQ96QS3 562 aa11.3□□□□□ -0.6
NECAP1-202ENST00000450991 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-202ENST00000450991 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-202ENST00000450991 SLIT1O75093 1534 aa11.3□□□□□ -0.6
NECAP1-202ENST00000450991 PANK3Q9H999 370 aa11.3□□□□□ -0.6
NECAP1-202ENST00000450991 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms