RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
RHBDF1-205ENST00000448893 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
RHBDF1-205ENST00000448893 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
RHBDF1-205ENST00000448893 ZNF772Q68DY9 489 aaPredicted RBP18.91■□□□□ 0.62
RHBDF1-205ENST00000448893 NKTRP30414 1462 aaKnown RBP18.9■□□□□ 0.62
RHBDF1-205ENST00000448893 APLP2Q06481 763 aa18.9■□□□□ 0.62
RHBDF1-205ENST00000448893 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
RHBDF1-205ENST00000448893 SPATA31A6Q5VVP1 1343 aa18.9■□□□□ 0.62
RHBDF1-205ENST00000448893 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.61
RHBDF1-205ENST00000448893 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
RHBDF1-205ENST00000448893 ADGRB3O60242 1522 aa18.89■□□□□ 0.61
RHBDF1-205ENST00000448893 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
RHBDF1-205ENST00000448893 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
RHBDF1-205ENST00000448893 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
RHBDF1-205ENST00000448893 CHD2O14647 1828 aaKnown RBP18.87■□□□□ 0.61
RHBDF1-205ENST00000448893 CADPS2Q86UW7 1296 aa18.87■□□□□ 0.61
RHBDF1-205ENST00000448893 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
RHBDF1-205ENST00000448893 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
RHBDF1-205ENST00000448893 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
RHBDF1-205ENST00000448893 RXRBP28702 533 aa18.86■□□□□ 0.61
RHBDF1-205ENST00000448893 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.86■□□□□ 0.61
RHBDF1-205ENST00000448893 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
RHBDF1-205ENST00000448893 ATF3P18847 181 aa18.85■□□□□ 0.61
RHBDF1-205ENST00000448893 MYO5BQ9ULV0 1848 aa18.84■□□□□ 0.61
RHBDF1-205ENST00000448893 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.61
RHBDF1-205ENST00000448893 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.61
RHBDF1-205ENST00000448893 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
RHBDF1-205ENST00000448893 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
RHBDF1-205ENST00000448893 COL16A1Q07092 1604 aaPredicted RBP18.82■□□□□ 0.6
RHBDF1-205ENST00000448893 RPRD2Q5VT52 1461 aaKnown RBP18.81■□□□□ 0.6
RHBDF1-205ENST00000448893 ADGRL2O95490 1459 aa18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 AMOTL2Q9Y2J4 779 aa18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 LRP6O75581 1613 aa18.8■□□□□ 0.6
RHBDF1-205ENST00000448893 TMEM131LA2VDJ0 1609 aa18.79■□□□□ 0.6
RHBDF1-205ENST00000448893 BRINP3Q76B58 766 aa18.79■□□□□ 0.6
RHBDF1-205ENST00000448893 GCC2Q8IWJ2 1684 aa18.77■□□□□ 0.6
RHBDF1-205ENST00000448893 PIK3R4Q99570 1358 aa18.77■□□□□ 0.6
RHBDF1-205ENST00000448893 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
RHBDF1-205ENST00000448893 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
RHBDF1-205ENST00000448893 FAM50AQ14320 339 aaKnown RBP18.75■□□□□ 0.59
RHBDF1-205ENST00000448893 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
RHBDF1-205ENST00000448893 LRRC59Q96AG4 307 aaKnown RBP18.73■□□□□ 0.59
RHBDF1-205ENST00000448893 AHDC1Q5TGY3 1603 aaPredicted RBP18.72■□□□□ 0.59
RHBDF1-205ENST00000448893 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
RHBDF1-205ENST00000448893 AFF2P51816 1311 aa18.72■□□□□ 0.59
RHBDF1-205ENST00000448893 SHPRHQ149N8 1683 aa18.71■□□□□ 0.59
RHBDF1-205ENST00000448893 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
RHBDF1-205ENST00000448893 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
RHBDF1-205ENST00000448893 CDK12Q9NYV4 1490 aaPredicted RBP18.68■□□□□ 0.58
RHBDF1-205ENST00000448893 DIP2AQ14689 1571 aa18.68■□□□□ 0.58
RHBDF1-205ENST00000448893 E9PCH4 1651 aa18.67■□□□□ 0.58
RHBDF1-205ENST00000448893 C8orf37Q96NL8 207 aa18.67■□□□□ 0.58
RHBDF1-205ENST00000448893 UNC13BO14795 1591 aa18.67■□□□□ 0.58
RHBDF1-205ENST00000448893 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
RHBDF1-205ENST00000448893 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
RHBDF1-205ENST00000448893 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
RHBDF1-205ENST00000448893 DCCP43146 1447 aa18.63■□□□□ 0.57
RHBDF1-205ENST00000448893 TRPM2O94759 1503 aa18.62■□□□□ 0.57
RHBDF1-205ENST00000448893 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
RHBDF1-205ENST00000448893 MST1RQ04912 1400 aa18.6■□□□□ 0.57
RHBDF1-205ENST00000448893 NUP155O75694 1391 aa18.6■□□□□ 0.57
RHBDF1-205ENST00000448893 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
RHBDF1-205ENST00000448893 METP08581 1390 aa18.59■□□□□ 0.57
RHBDF1-205ENST00000448893 ADAMTS2O95450 1211 aa18.59■□□□□ 0.57
RHBDF1-205ENST00000448893 ZNF326Q5BKZ1 582 aaKnown RBP18.59■□□□□ 0.57
RHBDF1-205ENST00000448893 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
RHBDF1-205ENST00000448893 XRN1Q8IZH2 1706 aaKnown RBP18.58■□□□□ 0.57
RHBDF1-205ENST00000448893 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.56
RHBDF1-205ENST00000448893 PNPLA6Q8IY17 1366 aa18.57■□□□□ 0.56
RHBDF1-205ENST00000448893 NHSL1Q5SYE7 1610 aa18.57■□□□□ 0.56
RHBDF1-205ENST00000448893 RGS12O14924 1447 aa18.57■□□□□ 0.56
RHBDF1-205ENST00000448893 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
RHBDF1-205ENST00000448893 USP21Q9UK80 565 aa18.55■□□□□ 0.56
RHBDF1-205ENST00000448893 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
RHBDF1-205ENST00000448893 FNBP4Q8N3X1 1017 aaPredicted RBP18.53■□□□□ 0.56
RHBDF1-205ENST00000448893 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
RHBDF1-205ENST00000448893 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
RHBDF1-205ENST00000448893 FOXD1Q16676 465 aa18.52■□□□□ 0.56
RHBDF1-205ENST00000448893 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
RHBDF1-205ENST00000448893 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
RHBDF1-205ENST00000448893 ADGRL3Q9HAR2 1447 aa18.5■□□□□ 0.55
RHBDF1-205ENST00000448893 ITGAEP38570 1179 aa18.5■□□□□ 0.55
RHBDF1-205ENST00000448893 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
RHBDF1-205ENST00000448893 C1orf167Q5SNV9 1468 aa18.49■□□□□ 0.55
RHBDF1-205ENST00000448893 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
RHBDF1-205ENST00000448893 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
RHBDF1-205ENST00000448893 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
RHBDF1-205ENST00000448893 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
RHBDF1-205ENST00000448893 LAMC1P11047 1609 aa18.45■□□□□ 0.54
RHBDF1-205ENST00000448893 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
RHBDF1-205ENST00000448893 EP400Q96L91 3159 aa18.42■□□□□ 0.54
RHBDF1-205ENST00000448893 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
RHBDF1-205ENST00000448893 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
RHBDF1-205ENST00000448893 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
RHBDF1-205ENST00000448893 GJD4Q96KN9 370 aaPredicted RBP18.41■□□□□ 0.54
RHBDF1-205ENST00000448893 ATRNO75882 1429 aa18.4■□□□□ 0.54
RHBDF1-205ENST00000448893 CLTCL1P53675 1640 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms