RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PPP1R15AO75807 674 aaPredicted RBP37.76■■■■□ 3.64
PMS1-214ENST00000446877 ANKRD50Q9ULJ7 1429 aa37.76■■■■□ 3.63
PMS1-214ENST00000446877 MSH6P52701 1360 aa37.74■■■■□ 3.63
PMS1-214ENST00000446877 NKTRP30414 1462 aaKnown RBP37.73■■■■□ 3.63
PMS1-214ENST00000446877 RPRD2Q5VT52 1461 aaKnown RBP37.73■■■■□ 3.63
PMS1-214ENST00000446877 SLAIN2Q9P270 581 aa37.7■■■■□ 3.63
PMS1-214ENST00000446877 PLEKHG1Q9ULL1 1385 aa37.68■■■■□ 3.62
PMS1-214ENST00000446877 RIMS2Q9UQ26 1411 aa37.65■■■■□ 3.62
PMS1-214ENST00000446877 CHGAP10645 457 aaKnown RBP37.65■■■■□ 3.62
PMS1-214ENST00000446877 ROBO1Q9Y6N7 1651 aa37.65■■■■□ 3.62
PMS1-214ENST00000446877 POTEAQ6S8J7 498 aa37.64■■■■□ 3.62
PMS1-214ENST00000446877 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.64■■■■□ 3.62
PMS1-214ENST00000446877 NWD1Q149M9 1564 aa37.63■■■■□ 3.62
PMS1-214ENST00000446877 ZFYVE9O95405 1425 aa37.63■■■■□ 3.61
PMS1-214ENST00000446877 TBX22Q9Y458 520 aa37.62■■■■□ 3.61
PMS1-214ENST00000446877 C14orf37Q86TY3 774 aa37.59■■■■□ 3.61
PMS1-214ENST00000446877 JCADQ9P266 1359 aa37.55■■■■□ 3.6
PMS1-214ENST00000446877 NUTM2DQ5VT03 806 aaPredicted RBP37.52■■■■□ 3.6
PMS1-214ENST00000446877 NCOA3Q9Y6Q9 1424 aa37.51■■■■□ 3.59
PMS1-214ENST00000446877 TMEM131LA2VDJ0 1609 aa37.49■■■■□ 3.59
PMS1-214ENST00000446877 ATF3P18847 181 aa37.46■■■■□ 3.59
PMS1-214ENST00000446877 CADPS2Q86UW7 1296 aa37.46■■■■□ 3.59
PMS1-214ENST00000446877 C19orf44Q9H6X5 657 aa37.46■■■■□ 3.59
PMS1-214ENST00000446877 GCC2Q8IWJ2 1684 aa37.45■■■■□ 3.59
PMS1-214ENST00000446877 CHD2O14647 1828 aaKnown RBP37.44■■■■□ 3.58
PMS1-214ENST00000446877 ROCK1Q13464 1354 aa37.43■■■■□ 3.58
PMS1-214ENST00000446877 PIK3R4Q99570 1358 aa37.42■■■■□ 3.58
PMS1-214ENST00000446877 PHLPP1O60346 1717 aa37.42■■■■□ 3.58
PMS1-214ENST00000446877 ADAMTS13Q76LX8 1427 aa37.41■■■■□ 3.58
PMS1-214ENST00000446877 UNC13BO14795 1591 aa37.41■■■■□ 3.58
PMS1-214ENST00000446877 MYO5BQ9ULV0 1848 aa37.4■■■■□ 3.58
PMS1-214ENST00000446877 NUP155O75694 1391 aa37.4■■■■□ 3.58
PMS1-214ENST00000446877 MEX3CQ5U5Q3 659 aaKnown RBP37.38■■■■□ 3.57
PMS1-214ENST00000446877 SPATA31A6Q5VVP1 1343 aa37.37■■■■□ 3.57
PMS1-214ENST00000446877 AMOTL2Q9Y2J4 779 aa37.37■■■■□ 3.57
PMS1-214ENST00000446877 ITGAEP38570 1179 aa37.36■■■■□ 3.57
PMS1-214ENST00000446877 DIP2AQ14689 1571 aa37.34■■■■□ 3.57
PMS1-214ENST00000446877 E9PCH4 1651 aa37.32■■■■□ 3.57
PMS1-214ENST00000446877 ZNF772Q68DY9 489 aaPredicted RBP37.29■■■■□ 3.56
PMS1-214ENST00000446877 COL16A1Q07092 1604 aaPredicted RBP37.28■■■■□ 3.56
PMS1-214ENST00000446877 IQGAP3Q86VI3 1631 aa37.28■■■■□ 3.56
PMS1-214ENST00000446877 TRPM2O94759 1503 aa37.26■■■■□ 3.56
PMS1-214ENST00000446877 ZNF326Q5BKZ1 582 aaKnown RBP37.24■■■■□ 3.55
PMS1-214ENST00000446877 BRINP3Q76B58 766 aa37.24■■■■□ 3.55
PMS1-214ENST00000446877 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.23■■■■□ 3.55
PMS1-214ENST00000446877 PTPRUQ92729 1446 aa37.22■■■■□ 3.55
PMS1-214ENST00000446877 LRP6O75581 1613 aa37.21■■■■□ 3.55
PMS1-214ENST00000446877 AHDC1Q5TGY3 1603 aaPredicted RBP37.2■■■■□ 3.55
PMS1-214ENST00000446877 NUTM2BA6NNL0 878 aaPredicted RBP37.16■■■■□ 3.54
PMS1-214ENST00000446877 NUTM2EB1AL46 878 aaPredicted RBP37.16■■■■□ 3.54
PMS1-214ENST00000446877 NUTM2AQ8IVF1 878 aaPredicted RBP37.16■■■■□ 3.54
PMS1-214ENST00000446877 TRIM52Q96A61 297 aa37.16■■■■□ 3.54
PMS1-214ENST00000446877 DCCP43146 1447 aa37.15■■■■□ 3.54
PMS1-214ENST00000446877 PPARGC1BQ86YN6 1023 aaKnown RBP37.12■■■■□ 3.53
PMS1-214ENST00000446877 RXRBP28702 533 aa37.11■■■■□ 3.53
PMS1-214ENST00000446877 SETD1AO15047 1707 aaKnown RBP37.1■■■■□ 3.53
PMS1-214ENST00000446877 METP08581 1390 aa37.08■■■■□ 3.53
PMS1-214ENST00000446877 SHPRHQ149N8 1683 aa37.07■■■■□ 3.52
PMS1-214ENST00000446877 LRRC59Q96AG4 307 aaKnown RBP37.07■■■■□ 3.52
PMS1-214ENST00000446877 SETBP1Q9Y6X0 1596 aa37.07■■■■□ 3.52
PMS1-214ENST00000446877 UPF1Q92900 1129 aaKnown RBP eCLIP37.05■■■■□ 3.52
PMS1-214ENST00000446877 ASXL1Q8IXJ9 1541 aa37.04■■■■□ 3.52
PMS1-214ENST00000446877 MST1RQ04912 1400 aa37.03■■■■□ 3.52
PMS1-214ENST00000446877 SETD5Q9C0A6 1442 aa37.02■■■■□ 3.52
PMS1-214ENST00000446877 NRXN3Q9Y4C0 1643 aa37■■■■□ 3.51
PMS1-214ENST00000446877 XRN1Q8IZH2 1706 aaKnown RBP37■■■■□ 3.51
PMS1-214ENST00000446877 AFF2P51816 1311 aa37■■■■□ 3.51
PMS1-214ENST00000446877 SPHKAPQ2M3C7 1700 aa36.97■■■■□ 3.51
PMS1-214ENST00000446877 ADGRL3Q9HAR2 1447 aa36.96■■■■□ 3.51
PMS1-214ENST00000446877 DDX17Q92841 729 aaKnown RBP36.94■■■■□ 3.5
PMS1-214ENST00000446877 C8orf37Q96NL8 207 aa36.93■■■■□ 3.5
PMS1-214ENST00000446877 VGFO15240 615 aaPredicted RBP36.91■■■■□ 3.5
PMS1-214ENST00000446877 CDK12Q9NYV4 1490 aaPredicted RBP36.89■■■■□ 3.5
PMS1-214ENST00000446877 QTRT2Q9H974 415 aaKnown RBP36.88■■■■□ 3.49
PMS1-214ENST00000446877 NEXMIFQ5QGS0 1516 aa36.88■■■■□ 3.49
PMS1-214ENST00000446877 PNPLA6Q8IY17 1366 aa36.87■■■■□ 3.49
PMS1-214ENST00000446877 CLTCL1P53675 1640 aa36.85■■■■□ 3.49
PMS1-214ENST00000446877 NHSL1Q5SYE7 1610 aa36.85■■■■□ 3.49
PMS1-214ENST00000446877 RBM6P78332 1123 aaKnown RBP36.84■■■■□ 3.49
PMS1-214ENST00000446877 NGLY1Q96IV0 654 aa36.83■■■■□ 3.49
PMS1-214ENST00000446877 ADAMTS2O95450 1211 aa36.82■■■■□ 3.48
PMS1-214ENST00000446877 C1orf167Q5SNV9 1468 aa36.82■■■■□ 3.48
PMS1-214ENST00000446877 NAIPQ13075 1403 aa36.8■■■■□ 3.48
PMS1-214ENST00000446877 RPGRIP1LQ68CZ1 1315 aa36.8■■■■□ 3.48
PMS1-214ENST00000446877 PTCH1Q13635 1447 aa36.77■■■■□ 3.48
PMS1-214ENST00000446877 ORAI2Q96SN7 254 aa36.77■■■■□ 3.48
PMS1-214ENST00000446877 ROBO2Q9HCK4 1378 aa36.77■■■■□ 3.48
PMS1-214ENST00000446877 SLC4A1APQ9BWU0 796 aaKnown RBP36.75■■■■□ 3.47
PMS1-214ENST00000446877 RRBP1Q9P2E9 1410 aaKnown RBP36.75■■■■□ 3.47
PMS1-214ENST00000446877 NALCNQ8IZF0 1738 aa36.74■■■■□ 3.47
PMS1-214ENST00000446877 SOS2Q07890 1332 aaPredicted RBP36.73■■■■□ 3.47
PMS1-214ENST00000446877 KIF1BO60333 1816 aa36.72■■■■□ 3.47
PMS1-214ENST00000446877 RGS12O14924 1447 aa36.7■■■■□ 3.47
PMS1-214ENST00000446877 USP21Q9UK80 565 aa36.68■■■■□ 3.46
PMS1-214ENST00000446877 HFM1A2PYH4 1435 aa36.68■■■■□ 3.46
PMS1-214ENST00000446877 TRPC5Q9UL62 973 aaPredicted RBP36.64■■■■□ 3.46
PMS1-214ENST00000446877 PRAG1Q86YV5 1406 aa36.63■■■■□ 3.45
PMS1-214ENST00000446877 ESCO1Q5FWF5 840 aa36.62■■■■□ 3.45
PMS1-214ENST00000446877 FNBP4Q8N3X1 1017 aaPredicted RBP36.6■■■■□ 3.45
PMS1-214ENST00000446877 NPHP3Q7Z494 1330 aa36.59■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms