RNA–Protein interactions for RNA: ENST00000443768.1

AC005539.1-201, humanhuman

BASIC

Gene AC005539.1, Length 1,479 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005539.1-201ENST00000443768 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
AC005539.1-201ENST00000443768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
AC005539.1-201ENST00000443768 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
AC005539.1-201ENST00000443768 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
AC005539.1-201ENST00000443768 MS4A1P11836 297 aa9.28□□□□□ -0.92
AC005539.1-201ENST00000443768 CLCN1P35523 988 aa9.28□□□□□ -0.92
AC005539.1-201ENST00000443768 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
AC005539.1-201ENST00000443768 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
AC005539.1-201ENST00000443768 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
AC005539.1-201ENST00000443768 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
AC005539.1-201ENST00000443768 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
AC005539.1-201ENST00000443768 DNAJB2P25686 324 aa9.26□□□□□ -0.93
AC005539.1-201ENST00000443768 DAXXQ9UER7 740 aaPredicted RBP9.26□□□□□ -0.93
AC005539.1-201ENST00000443768 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
AC005539.1-201ENST00000443768 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
AC005539.1-201ENST00000443768 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
AC005539.1-201ENST00000443768 FAM98CQ17RN3 349 aaKnown RBP9.24□□□□□ -0.93
AC005539.1-201ENST00000443768 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
AC005539.1-201ENST00000443768 PTPN5P54829 565 aa9.22□□□□□ -0.93
AC005539.1-201ENST00000443768 STAC3Q96MF2 364 aa9.22□□□□□ -0.93
AC005539.1-201ENST00000443768 IL27Q8NEV9 243 aa9.21□□□□□ -0.93
AC005539.1-201ENST00000443768 NBPF3Q9H094 633 aa9.21□□□□□ -0.93
AC005539.1-201ENST00000443768 SWT1Q5T5J6 900 aaKnown RBP9.21□□□□□ -0.94
AC005539.1-201ENST00000443768 CD46P15529 392 aa9.2□□□□□ -0.94
AC005539.1-201ENST00000443768 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
AC005539.1-201ENST00000443768 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
AC005539.1-201ENST00000443768 SLC10A3P09131 477 aa9.18□□□□□ -0.94
AC005539.1-201ENST00000443768 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
AC005539.1-201ENST00000443768 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
AC005539.1-201ENST00000443768 LCE2BO14633 110 aa9.17□□□□□ -0.94
AC005539.1-201ENST00000443768 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
AC005539.1-201ENST00000443768 DDX11L8A8MPP1 907 aa9.15□□□□□ -0.94
AC005539.1-201ENST00000443768 LAPTM4AQ15012 233 aa9.15□□□□□ -0.95
AC005539.1-201ENST00000443768 SULF1Q8IWU6 871 aa9.15□□□□□ -0.95
AC005539.1-201ENST00000443768 TRAF7Q6Q0C0 670 aa9.14□□□□□ -0.95
AC005539.1-201ENST00000443768 GOPCQ9HD26 462 aa9.12□□□□□ -0.95
AC005539.1-201ENST00000443768 GCGRP47871 477 aa9.11□□□□□ -0.95
AC005539.1-201ENST00000443768 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
AC005539.1-201ENST00000443768 SOWAHBA6NEL2 793 aa9.1□□□□□ -0.95
AC005539.1-201ENST00000443768 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
AC005539.1-201ENST00000443768 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
AC005539.1-201ENST00000443768 SH3D19Q5HYK7 790 aa9.09□□□□□ -0.95
AC005539.1-201ENST00000443768 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
AC005539.1-201ENST00000443768 TBC1D2Q9BYX2 928 aa9.09□□□□□ -0.95
AC005539.1-201ENST00000443768 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.09□□□□□ -0.95
AC005539.1-201ENST00000443768 MYSM1Q5VVJ2 828 aa9.08□□□□□ -0.96
AC005539.1-201ENST00000443768 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
AC005539.1-201ENST00000443768 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
AC005539.1-201ENST00000443768 BCAMP50895 628 aa9.08□□□□□ -0.96
AC005539.1-201ENST00000443768 WNT2BQ93097 391 aa9.08□□□□□ -0.96
AC005539.1-201ENST00000443768 ANKK1Q8NFD2 765 aa9.07□□□□□ -0.96
AC005539.1-201ENST00000443768 SKIV2LQ15477 1246 aaKnown RBP9.06□□□□□ -0.96
AC005539.1-201ENST00000443768 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
AC005539.1-201ENST00000443768 KDM4AO75164 1064 aa9.05□□□□□ -0.96
AC005539.1-201ENST00000443768 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
AC005539.1-201ENST00000443768 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
AC005539.1-201ENST00000443768 CFHP08603 1231 aa9.04□□□□□ -0.96
AC005539.1-201ENST00000443768 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
AC005539.1-201ENST00000443768 MOXD2PA6NHM9 499 aa9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 DIXDC1Q155Q3 683 aa9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 RSPH4AQ5TD94 716 aa9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 PROCA1Q8NCQ7 364 aaPredicted RBP9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
AC005539.1-201ENST00000443768 SPTLC1O15269 473 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 HOXA2O43364 376 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 RNF40O75150 1001 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 FUT2Q10981 343 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 WBP1LQ9NX94 342 aa9.02□□□□□ -0.96
AC005539.1-201ENST00000443768 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 NDUFV2P19404 249 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 GJA5P36382 358 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 SLC4A3P48751 1232 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 APLP1P51693 650 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 TUSC1Q2TAM9 212 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 RSBN1LQ6PCB5 846 aaPredicted RBP9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 NUTM1Q86Y26 1132 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 HLA-CQ95604 372 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
AC005539.1-201ENST00000443768 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
AC005539.1-201ENST00000443768 PPP4CP60510 307 aa9.01□□□□□ -0.97
AC005539.1-201ENST00000443768 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
AC005539.1-201ENST00000443768 GFRA3O60609 400 aa9□□□□□ -0.97
AC005539.1-201ENST00000443768 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
AC005539.1-201ENST00000443768 USP46P62068 366 aa9□□□□□ -0.97
AC005539.1-201ENST00000443768 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
AC005539.1-201ENST00000443768 ZNF787Q6DD87 383 aa8.99□□□□□ -0.97
AC005539.1-201ENST00000443768 NECTIN2Q92692 538 aa8.99□□□□□ -0.97
AC005539.1-201ENST00000443768 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
AC005539.1-201ENST00000443768 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
AC005539.1-201ENST00000443768 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
AC005539.1-201ENST00000443768 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
AC005539.1-201ENST00000443768 KMT5BQ4FZB7 885 aa8.97□□□□□ -0.97
AC005539.1-201ENST00000443768 MORN1Q5T089 497 aa8.97□□□□□ -0.97
AC005539.1-201ENST00000443768 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
AC005539.1-201ENST00000443768 LILRB3O75022 631 aa8.96□□□□□ -0.98
AC005539.1-201ENST00000443768 QPCTQ16769 361 aa8.96□□□□□ -0.98
AC005539.1-201ENST00000443768 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 484.4 ms