RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MTMR14Q8NCE2 650 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 HS3ST6Q96QI5 342 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 PCDH10Q9P2E7 1040 aa6.98□□□□□ -1.29
CDC42BPA-207ENST00000441725 NUDT7P0C024 238 aa6.97□□□□□ -1.29
CDC42BPA-207ENST00000441725 ERBB3P21860 1342 aa6.97□□□□□ -1.29
CDC42BPA-207ENST00000441725 POTEB3A0JP26 581 aa6.96□□□□□ -1.29
CDC42BPA-207ENST00000441725 PPP2R2DQ66LE6 453 aa6.96□□□□□ -1.29
CDC42BPA-207ENST00000441725 POTEBQ6S5H4 581 aa6.96□□□□□ -1.29
CDC42BPA-207ENST00000441725 TMEM259Q4ZIN3 620 aa6.96□□□□□ -1.3
CDC42BPA-207ENST00000441725 CDAN1Q8IWY9 1227 aa6.96□□□□□ -1.3
CDC42BPA-207ENST00000441725 KDM4FA0A1W2PPD8 638 aa6.95□□□□□ -1.3
CDC42BPA-207ENST00000441725 VARS2Q5ST30 1063 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-207ENST00000441725 FBXW7Q969H0 707 aa6.95□□□□□ -1.3
CDC42BPA-207ENST00000441725 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
CDC42BPA-207ENST00000441725 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
CDC42BPA-207ENST00000441725 JPH4Q96JJ6 628 aa6.94□□□□□ -1.3
CDC42BPA-207ENST00000441725 POM121CA8CG34 1229 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 C6orf132Q5T0Z8 1188 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 RIC3Q7Z5B4 369 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 SPIRE2Q8WWL2 714 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 ABL2P42684 1182 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 RGS22Q8NE09 1264 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 CERKQ8TCT0 537 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 LHX6Q9UPM6 363 aa6.93□□□□□ -1.3
CDC42BPA-207ENST00000441725 TMCO4Q5TGY1 634 aa6.92□□□□□ -1.3
CDC42BPA-207ENST00000441725 GLMNQ92990 594 aa6.92□□□□□ -1.3
CDC42BPA-207ENST00000441725 GZF1Q9H116 711 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-207ENST00000441725 TBC1D2BQ9UPU7 963 aa6.92□□□□□ -1.3
CDC42BPA-207ENST00000441725 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 QPCTQ16769 361 aa6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 CSPP1Q1MSJ5 1256 aa6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 RBM27Q9P2N5 1060 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 FOSBP53539 338 aa6.91□□□□□ -1.3
CDC42BPA-207ENST00000441725 SPTLC1O15269 473 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 MFAP1P55081 439 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 ZNF687Q8N1G0 1237 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 MOXD2PA6NHM9 499 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 CD46P15529 392 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 TUSC1Q2TAM9 212 aa6.89□□□□□ -1.31
CDC42BPA-207ENST00000441725 PSDA5PKW4 1024 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 PRSS12P56730 875 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 CDCA7LQ96GN5 454 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 ACIN1Q9UKV3 1341 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 RCCD1A6NED2 376 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 SOCS7O14512 581 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 AP1G2O75843 785 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 ZNF454Q8N9F8 522 aa6.88□□□□□ -1.31
CDC42BPA-207ENST00000441725 ADAM33Q9BZ11 813 aa6.87□□□□□ -1.31
CDC42BPA-207ENST00000441725 PCDHB15Q9Y5E8 787 aa6.87□□□□□ -1.31
CDC42BPA-207ENST00000441725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 LILRB3O75022 631 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 NDUFV2P19404 249 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 RTL5Q5HYW3 569 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 ADAMTS19Q8TE59 1207 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 FAM198AQ9UFP1 575 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 USP17L8P0C7I0 530 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 NUTM1Q86Y26 1132 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 PRM3Q9NNZ6 103 aa6.86□□□□□ -1.31
CDC42BPA-207ENST00000441725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 ZNF428Q96B54 188 aa6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 DDX11L8A8MPP1 907 aa6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 PPP4R3BQ5MIZ7 849 aa6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 PBXIP1Q96AQ6 731 aa6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 EYA1Q99502 592 aa6.85□□□□□ -1.31
CDC42BPA-207ENST00000441725 RFX1P22670 979 aa6.84□□□□□ -1.31
CDC42BPA-207ENST00000441725 HDGFL1Q5TGJ6 251 aa6.84□□□□□ -1.31
CDC42BPA-207ENST00000441725 GJD4Q96KN9 370 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-207ENST00000441725 PBX2P40425 430 aa6.84□□□□□ -1.32
CDC42BPA-207ENST00000441725 SULF1Q8IWU6 871 aa6.84□□□□□ -1.32
CDC42BPA-207ENST00000441725 CABLES1Q8TDN4 633 aa6.84□□□□□ -1.32
CDC42BPA-207ENST00000441725 C3orf80F5H4A9 247 aa6.83□□□□□ -1.32
CDC42BPA-207ENST00000441725 CARNS1A5YM72 827 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 NUTM2BA6NNL0 878 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 NUTM2EB1AL46 878 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 GJA5P36382 358 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 PDE4CQ08493 712 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 CFAP70Q5T0N1 1121 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 NUTM2DQ5VT03 806 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 POTEEQ6S8J3 1075 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 NUTM2AQ8IVF1 878 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 GPR37L1O60883 481 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 NDUFB9Q9Y6M9 179 aa6.82□□□□□ -1.32
CDC42BPA-207ENST00000441725 COL9A1P20849 921 aa6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 TSKSQ9UJT2 592 aa6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 BRD1O95696 1058 aa6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 RBM25P49756 843 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 NUDT18Q6ZVK8 323 aa6.81□□□□□ -1.32
CDC42BPA-207ENST00000441725 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms