RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-204ENST00000439977 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-204ENST00000439977 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
HERPUD1-204ENST00000439977 LAS1LQ9Y4W2 734 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-204ENST00000439977 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-204ENST00000439977 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
HERPUD1-204ENST00000439977 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
HERPUD1-204ENST00000439977 KANK1Q14678 1352 aa17.78■□□□□ 0.44
HERPUD1-204ENST00000439977 LAMC1P11047 1609 aa17.78■□□□□ 0.44
HERPUD1-204ENST00000439977 MADDQ8WXG6 1647 aa17.77■□□□□ 0.43
HERPUD1-204ENST00000439977 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.43
HERPUD1-204ENST00000439977 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.43
HERPUD1-204ENST00000439977 BCAR3O75815 825 aa17.76■□□□□ 0.43
HERPUD1-204ENST00000439977 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
HERPUD1-204ENST00000439977 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
HERPUD1-204ENST00000439977 FANCAO15360 1455 aa17.75■□□□□ 0.43
HERPUD1-204ENST00000439977 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-204ENST00000439977 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-204ENST00000439977 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
HERPUD1-204ENST00000439977 PTPRTO14522 1441 aa17.75■□□□□ 0.43
HERPUD1-204ENST00000439977 ZFYVE16Q7Z3T8 1539 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 MS4A1P11836 297 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 GGT6Q6P531 493 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 TMEM132EQ6IEE7 984 aa17.74■□□□□ 0.43
HERPUD1-204ENST00000439977 TRPM2O94759 1503 aa17.73■□□□□ 0.43
HERPUD1-204ENST00000439977 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
HERPUD1-204ENST00000439977 RGS3P49796 1198 aa17.73■□□□□ 0.43
HERPUD1-204ENST00000439977 RNF17Q9BXT8 1623 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-204ENST00000439977 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
HERPUD1-204ENST00000439977 EIF3AQ14152 1382 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-204ENST00000439977 ASXL1Q8IXJ9 1541 aa17.72■□□□□ 0.43
HERPUD1-204ENST00000439977 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-204ENST00000439977 INSRP06213 1382 aa17.71■□□□□ 0.43
HERPUD1-204ENST00000439977 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
HERPUD1-204ENST00000439977 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.42
HERPUD1-204ENST00000439977 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
HERPUD1-204ENST00000439977 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
HERPUD1-204ENST00000439977 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
HERPUD1-204ENST00000439977 ATP7AQ04656 1500 aa17.68■□□□□ 0.42
HERPUD1-204ENST00000439977 IQGAP1P46940 1657 aa17.68■□□□□ 0.42
HERPUD1-204ENST00000439977 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
HERPUD1-204ENST00000439977 NEFMP07197 916 aa17.67■□□□□ 0.42
HERPUD1-204ENST00000439977 CENPQQ7L2Z9 268 aaPredicted RBP17.66■□□□□ 0.42
HERPUD1-204ENST00000439977 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
HERPUD1-204ENST00000439977 CLASP1Q7Z460 1538 aa17.66■□□□□ 0.42
HERPUD1-204ENST00000439977 ERVK-7P63135 1459 aa17.66■□□□□ 0.42
HERPUD1-204ENST00000439977 PIK3C2GO75747 1445 aa17.66■□□□□ 0.42
HERPUD1-204ENST00000439977 SAFB2Q14151 953 aaKnown RBP eCLIP17.65■□□□□ 0.42
HERPUD1-204ENST00000439977 SYNMO15061 1565 aa17.65■□□□□ 0.42
HERPUD1-204ENST00000439977 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
HERPUD1-204ENST00000439977 NOS1P29475 1434 aa17.64■□□□□ 0.42
HERPUD1-204ENST00000439977 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-204ENST00000439977 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
HERPUD1-204ENST00000439977 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-204ENST00000439977 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-204ENST00000439977 PANK1Q8TE04 598 aa17.63■□□□□ 0.41
HERPUD1-204ENST00000439977 E9PSI1 815 aa17.62■□□□□ 0.41
HERPUD1-204ENST00000439977 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
HERPUD1-204ENST00000439977 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 CEP152O94986 1710 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 IGHDP01880 384 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 TET3O43151 1660 aa17.61■□□□□ 0.41
HERPUD1-204ENST00000439977 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
HERPUD1-204ENST00000439977 MYOM1P52179 1685 aa17.6■□□□□ 0.41
HERPUD1-204ENST00000439977 NSD3Q9BZ95 1437 aa17.59■□□□□ 0.41
HERPUD1-204ENST00000439977 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
HERPUD1-204ENST00000439977 NKTRP30414 1462 aaKnown RBP17.59■□□□□ 0.41
HERPUD1-204ENST00000439977 MTHFSP49914 203 aa17.58■□□□□ 0.41
HERPUD1-204ENST00000439977 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERPUD1-204ENST00000439977 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
HERPUD1-204ENST00000439977 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
HERPUD1-204ENST00000439977 ABCA6Q8N139 1617 aa17.58■□□□□ 0.4
HERPUD1-204ENST00000439977 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
HERPUD1-204ENST00000439977 RAPGEF3O95398 923 aa17.57■□□□□ 0.4
HERPUD1-204ENST00000439977 TCP11L2Q8N4U5 519 aa17.57■□□□□ 0.4
HERPUD1-204ENST00000439977 CFAP65Q6ZU64 1925 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-204ENST00000439977 INO80Q9ULG1 1556 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-204ENST00000439977 DAXXQ9UER7 740 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-204ENST00000439977 STK26Q9P289 416 aa17.56■□□□□ 0.4
HERPUD1-204ENST00000439977 KDM5AP29375 1690 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-204ENST00000439977 MAP3K4Q9Y6R4 1608 aa17.56■□□□□ 0.4
HERPUD1-204ENST00000439977 VWDEQ8N2E2 1590 aa17.56■□□□□ 0.4
HERPUD1-204ENST00000439977 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 C14orf93Q9H972 538 aaKnown RBP17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 MROH1Q8NDA8 1641 aa17.55■□□□□ 0.4
HERPUD1-204ENST00000439977 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
HERPUD1-204ENST00000439977 MYOM2P54296 1465 aa17.53■□□□□ 0.4
HERPUD1-204ENST00000439977 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
HERPUD1-204ENST00000439977 NPATQ14207 1427 aa17.53■□□□□ 0.4
HERPUD1-204ENST00000439977 EFCAB6Q5THR3 1501 aa17.52■□□□□ 0.39
HERPUD1-204ENST00000439977 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
HERPUD1-204ENST00000439977 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
HERPUD1-204ENST00000439977 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms