RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TPM2P07951 284 aa20.09■□□□□ 0.81
DHFR-201ENST00000439211 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
DHFR-201ENST00000439211 ERBINQ96RT1 1412 aa20.08■□□□□ 0.81
DHFR-201ENST00000439211 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
DHFR-201ENST00000439211 BCL11BQ9C0K0 894 aaPredicted RBP20.08■□□□□ 0.8
DHFR-201ENST00000439211 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
DHFR-201ENST00000439211 ESPNB1AK53 854 aa20.07■□□□□ 0.8
DHFR-201ENST00000439211 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
DHFR-201ENST00000439211 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
DHFR-201ENST00000439211 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
DHFR-201ENST00000439211 UHRF1BP1Q6BDS2 1440 aa20.06■□□□□ 0.8
DHFR-201ENST00000439211 ADGRL2O95490 1459 aa20.06■□□□□ 0.8
DHFR-201ENST00000439211 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
DHFR-201ENST00000439211 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
DHFR-201ENST00000439211 TESK2Q96S53 571 aa20.05■□□□□ 0.8
DHFR-201ENST00000439211 ZHX1Q9UKY1 873 aaPredicted RBP20.05■□□□□ 0.8
DHFR-201ENST00000439211 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
DHFR-201ENST00000439211 CENPQQ7L2Z9 268 aaPredicted RBP20.05■□□□□ 0.8
DHFR-201ENST00000439211 PARD3Q8TEW0 1356 aa20.04■□□□□ 0.8
DHFR-201ENST00000439211 PDIA4P13667 645 aaKnown RBP20.04■□□□□ 0.8
DHFR-201ENST00000439211 BBXQ8WY36 941 aaPredicted RBP20.04■□□□□ 0.8
DHFR-201ENST00000439211 KIAA1211Q6ZU35 1233 aa20.03■□□□□ 0.8
DHFR-201ENST00000439211 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.81e-7■■■□□ 16.3
DHFR-201ENST00000439211 MSNP26038 577 aaKnown RBP20.03■□□□□ 0.8
DHFR-201ENST00000439211 PRAG1Q86YV5 1406 aa20.03■□□□□ 0.8
DHFR-201ENST00000439211 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
DHFR-201ENST00000439211 MBD5Q9P267 1494 aa20.02■□□□□ 0.8
DHFR-201ENST00000439211 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
DHFR-201ENST00000439211 KDM5CP41229 1560 aa20.02■□□□□ 0.8
DHFR-201ENST00000439211 MORC1Q86VD1 984 aa20.02■□□□□ 0.79
DHFR-201ENST00000439211 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
DHFR-201ENST00000439211 NUP160Q12769 1436 aa20■□□□□ 0.79
DHFR-201ENST00000439211 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
DHFR-201ENST00000439211 BCAR3O75815 825 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 BCL2L13Q9BXK5 485 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 PRDM10Q9NQV6 1147 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 TRAK1Q9UPV9 953 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 FAM135AQ9P2D6 1515 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 KANK1Q14678 1352 aa19.99■□□□□ 0.79
DHFR-201ENST00000439211 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
DHFR-201ENST00000439211 CDK11BP21127 795 aaKnown RBP19.98■□□□□ 0.79
DHFR-201ENST00000439211 ARHGEF12Q9NZN5 1544 aa19.98■□□□□ 0.79
DHFR-201ENST00000439211 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
DHFR-201ENST00000439211 GGT6Q6P531 493 aa19.97■□□□□ 0.79
DHFR-201ENST00000439211 MRE11P49959 708 aa19.96■□□□□ 0.79
DHFR-201ENST00000439211 DUSP27Q5VZP5 1158 aa19.95■□□□□ 0.78
DHFR-201ENST00000439211 CENPJQ9HC77 1338 aaPredicted RBP19.94■□□□□ 0.78
DHFR-201ENST00000439211 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
DHFR-201ENST00000439211 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
DHFR-201ENST00000439211 PANK1Q8TE04 598 aa19.93■□□□□ 0.78
DHFR-201ENST00000439211 CFAP53Q96M91 514 aa19.93■□□□□ 0.78
DHFR-201ENST00000439211 E9PSI1 815 aa19.92■□□□□ 0.78
DHFR-201ENST00000439211 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
DHFR-201ENST00000439211 R3HCC1Q9Y3T6 440 aaKnown RBP19.92■□□□□ 0.78
DHFR-201ENST00000439211 SYCP2Q9BX26 1530 aa19.91■□□□□ 0.78
DHFR-201ENST00000439211 U2SURPO15042 1029 aaKnown RBP19.91■□□□□ 0.78
DHFR-201ENST00000439211 MAP7D2Q96T17 732 aa19.91■□□□□ 0.78
DHFR-201ENST00000439211 A2MP01023 1474 aa19.9■□□□□ 0.78
DHFR-201ENST00000439211 FTSJ3Q8IY81 847 aaKnown RBP19.9■□□□□ 0.78
DHFR-201ENST00000439211 ABCC10Q5T3U5 1492 aa19.89■□□□□ 0.78
DHFR-201ENST00000439211 U2AF1L5P0DN76 240 aaPredicted RBP19.89■□□□□ 0.78
DHFR-201ENST00000439211 U2AF1Q01081 240 aaKnown RBP eCLIP19.89■□□□□ 0.78
DHFR-201ENST00000439211 ZBTB7CA1YPR0 619 aa19.89■□□□□ 0.77
DHFR-201ENST00000439211 SLFN5Q08AF3 891 aa19.89■□□□□ 0.77
DHFR-201ENST00000439211 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
DHFR-201ENST00000439211 TRAK2O60296 914 aa19.87■□□□□ 0.77
DHFR-201ENST00000439211 GRPEL1Q9HAV7 217 aa19.87■□□□□ 0.77
DHFR-201ENST00000439211 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
DHFR-201ENST00000439211 STK26Q9P289 416 aa19.86■□□□□ 0.77
DHFR-201ENST00000439211 CHMP4BQ9H444 224 aaKnown RBP19.85■□□□□ 0.77
DHFR-201ENST00000439211 COL17A1Q9UMD9 1497 aaPredicted RBP19.85■□□□□ 0.77
DHFR-201ENST00000439211 DNTTIP2Q5QJE6 756 aaKnown RBP19.84■□□□□ 0.77
DHFR-201ENST00000439211 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.84■□□□□ 0.77
DHFR-201ENST00000439211 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
DHFR-201ENST00000439211 SPINK5Q9NQ38 1064 aaPredicted RBP19.84■□□□□ 0.77
DHFR-201ENST00000439211 NAP1L2Q9ULW6 460 aaPredicted RBP19.83■□□□□ 0.76
DHFR-201ENST00000439211 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
DHFR-201ENST00000439211 MCM4P33991 863 aa19.8■□□□□ 0.76
DHFR-201ENST00000439211 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
DHFR-201ENST00000439211 TCP11L2Q8N4U5 519 aa19.8■□□□□ 0.76
DHFR-201ENST00000439211 ABCA8O94911 1581 aa19.8■□□□□ 0.76
DHFR-201ENST00000439211 GPRASP1Q5JY77 1395 aa19.8■□□□□ 0.76
DHFR-201ENST00000439211 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
DHFR-201ENST00000439211 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
DHFR-201ENST00000439211 STAG3Q9UJ98 1225 aa19.79■□□□□ 0.76
DHFR-201ENST00000439211 CDC42BPAQ5VT25 1732 aa19.78■□□□□ 0.76
DHFR-201ENST00000439211 MTHFSP49914 203 aa19.78■□□□□ 0.76
DHFR-201ENST00000439211 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
DHFR-201ENST00000439211 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
DHFR-201ENST00000439211 POLR1AO95602 1720 aaPredicted RBP19.77■□□□□ 0.75
DHFR-201ENST00000439211 IGHDP01880 384 aa19.76■□□□□ 0.75
DHFR-201ENST00000439211 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
DHFR-201ENST00000439211 STAC3Q96MF2 364 aa19.76■□□□□ 0.75
DHFR-201ENST00000439211 C8orf34Q49A92 452 aa19.76■□□□□ 0.75
DHFR-201ENST00000439211 PRDM4Q9UKN5 801 aa19.76■□□□□ 0.75
DHFR-201ENST00000439211 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
DHFR-201ENST00000439211 DMRT2Q9Y5R5 561 aa19.75■□□□□ 0.75
DHFR-201ENST00000439211 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
DHFR-201ENST00000439211 KDM5DQ9BY66 1539 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms