RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.3
LRCH3-206ENST00000438796 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
LRCH3-206ENST00000438796 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
LRCH3-206ENST00000438796 ZNF428Q96B54 188 aa16.87■□□□□ 0.29
LRCH3-206ENST00000438796 NAP1L1P55209 391 aaKnown RBP16.87■□□□□ 0.29
LRCH3-206ENST00000438796 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
LRCH3-206ENST00000438796 CPLX1O14810 134 aa16.87■□□□□ 0.29
LRCH3-206ENST00000438796 L3MBTL2Q969R5 705 aa16.87■□□□□ 0.29
LRCH3-206ENST00000438796 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
LRCH3-206ENST00000438796 ERICH2A1L162 156 aa16.86■□□□□ 0.29
LRCH3-206ENST00000438796 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
LRCH3-206ENST00000438796 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
LRCH3-206ENST00000438796 TRDNQ13061 729 aa16.84■□□□□ 0.29
LRCH3-206ENST00000438796 CCDC70Q6NSX1 233 aa16.84■□□□□ 0.29
LRCH3-206ENST00000438796 ZFYVE27Q5T4F4 411 aa16.84■□□□□ 0.29
LRCH3-206ENST00000438796 SETQ01105 290 aaPredicted RBP16.84■□□□□ 0.29
LRCH3-206ENST00000438796 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
LRCH3-206ENST00000438796 NACADO15069 1562 aa16.83■□□□□ 0.29
LRCH3-206ENST00000438796 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.29
LRCH3-206ENST00000438796 CCDC47Q96A33 483 aaKnown RBP16.83■□□□□ 0.29
LRCH3-206ENST00000438796 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.29
LRCH3-206ENST00000438796 COG6Q9Y2V7 657 aa16.83■□□□□ 0.29
LRCH3-206ENST00000438796 TMEM132AQ24JP5 1023 aa16.83■□□□□ 0.28
LRCH3-206ENST00000438796 CT47A1Q5JQC4 288 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-206ENST00000438796 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
LRCH3-206ENST00000438796 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
LRCH3-206ENST00000438796 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
LRCH3-206ENST00000438796 HMOX1P09601 288 aa16.82■□□□□ 0.28
LRCH3-206ENST00000438796 CRBNQ96SW2 442 aa16.82■□□□□ 0.28
LRCH3-206ENST00000438796 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
LRCH3-206ENST00000438796 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 ATF3P18847 181 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 FKBP5Q13451 457 aaPredicted RBP16.81■□□□□ 0.28
LRCH3-206ENST00000438796 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 RIC3Q7Z5B4 369 aa16.81■□□□□ 0.28
LRCH3-206ENST00000438796 WASHC4Q2M389 1173 aa16.8■□□□□ 0.28
LRCH3-206ENST00000438796 RUFY2Q8WXA3 655 aa16.8■□□□□ 0.28
LRCH3-206ENST00000438796 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
LRCH3-206ENST00000438796 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
LRCH3-206ENST00000438796 CCAR1Q8IX12 1150 aaKnown RBP16.79■□□□□ 0.28
LRCH3-206ENST00000438796 VPS37CA5D8V6 355 aaPredicted RBP16.79■□□□□ 0.28
LRCH3-206ENST00000438796 DDX11L8A8MPP1 907 aa16.79■□□□□ 0.28
LRCH3-206ENST00000438796 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
LRCH3-206ENST00000438796 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
LRCH3-206ENST00000438796 IPO7O95373 1038 aaKnown RBP16.79■□□□□ 0.28
LRCH3-206ENST00000438796 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
LRCH3-206ENST00000438796 EPS15P42566 896 aa16.78■□□□□ 0.28
LRCH3-206ENST00000438796 RIPK4P57078 832 aa16.78■□□□□ 0.28
LRCH3-206ENST00000438796 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
LRCH3-206ENST00000438796 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
LRCH3-206ENST00000438796 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
LRCH3-206ENST00000438796 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
LRCH3-206ENST00000438796 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
LRCH3-206ENST00000438796 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
LRCH3-206ENST00000438796 PAF1Q8N7H5 531 aa16.77■□□□□ 0.28
LRCH3-206ENST00000438796 PRDM2Q13029 1718 aa16.77■□□□□ 0.28
LRCH3-206ENST00000438796 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
LRCH3-206ENST00000438796 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
LRCH3-206ENST00000438796 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
LRCH3-206ENST00000438796 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
LRCH3-206ENST00000438796 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
LRCH3-206ENST00000438796 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
LRCH3-206ENST00000438796 TIMELESSQ9UNS1 1208 aa16.75■□□□□ 0.27
LRCH3-206ENST00000438796 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
LRCH3-206ENST00000438796 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
LRCH3-206ENST00000438796 EXOC6Q8TAG9 804 aa16.75■□□□□ 0.27
LRCH3-206ENST00000438796 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
LRCH3-206ENST00000438796 HOOK1Q9UJC3 728 aaKnown RBP16.74■□□□□ 0.27
LRCH3-206ENST00000438796 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
LRCH3-206ENST00000438796 APAF1O14727 1248 aa16.74■□□□□ 0.27
LRCH3-206ENST00000438796 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
LRCH3-206ENST00000438796 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
LRCH3-206ENST00000438796 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
LRCH3-206ENST00000438796 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
LRCH3-206ENST00000438796 FAM161AQ3B820 660 aa16.74■□□□□ 0.27
LRCH3-206ENST00000438796 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
LRCH3-206ENST00000438796 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
LRCH3-206ENST00000438796 ATP2B2Q01814 1243 aa16.73■□□□□ 0.27
LRCH3-206ENST00000438796 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
LRCH3-206ENST00000438796 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
LRCH3-206ENST00000438796 ZNF771Q7L3S4 317 aaPredicted RBP16.73■□□□□ 0.27
LRCH3-206ENST00000438796 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
LRCH3-206ENST00000438796 CCDC18Q5T9S5 1454 aa16.72■□□□□ 0.27
LRCH3-206ENST00000438796 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
LRCH3-206ENST00000438796 CENPQQ7L2Z9 268 aaPredicted RBP16.71■□□□□ 0.27
LRCH3-206ENST00000438796 PDILTQ8N807 584 aa16.71■□□□□ 0.27
LRCH3-206ENST00000438796 GPS2Q13227 327 aa16.71■□□□□ 0.27
LRCH3-206ENST00000438796 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
LRCH3-206ENST00000438796 RRP12Q5JTH9 1297 aaKnown RBP16.71■□□□□ 0.27
LRCH3-206ENST00000438796 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.26
LRCH3-206ENST00000438796 RNF20Q5VTR2 975 aa16.71■□□□□ 0.26
LRCH3-206ENST00000438796 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
LRCH3-206ENST00000438796 E9PSI1 815 aa16.7■□□□□ 0.26
LRCH3-206ENST00000438796 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
LRCH3-206ENST00000438796 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
LRCH3-206ENST00000438796 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
LRCH3-206ENST00000438796 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
LRCH3-206ENST00000438796 FAM69CQ0P6D2 419 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms