RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.13
LINC01088-201ENST00000437737 ANKRD30AQ9BXX3 1397 aa22.08■■□□□ 1.12
LINC01088-201ENST00000437737 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
LINC01088-201ENST00000437737 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
LINC01088-201ENST00000437737 CHIC2Q9UKJ5 165 aa22.07■■□□□ 1.12
LINC01088-201ENST00000437737 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
LINC01088-201ENST00000437737 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
LINC01088-201ENST00000437737 MEX3CQ5U5Q3 659 aaKnown RBP22.05■■□□□ 1.12
LINC01088-201ENST00000437737 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
LINC01088-201ENST00000437737 PLEKHG1Q9ULL1 1385 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.12
LINC01088-201ENST00000437737 LRP6O75581 1613 aa22.02■■□□□ 1.11
LINC01088-201ENST00000437737 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 APLP2Q06481 763 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
LINC01088-201ENST00000437737 RIMS2Q9UQ26 1411 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
LINC01088-201ENST00000437737 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
LINC01088-201ENST00000437737 TRIM52Q96A61 297 aa22■■□□□ 1.11
LINC01088-201ENST00000437737 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
LINC01088-201ENST00000437737 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
LINC01088-201ENST00000437737 UPF1Q92900 1129 aaKnown RBP eCLIP21.97■■□□□ 1.11
LINC01088-201ENST00000437737 TMEM131LA2VDJ0 1609 aa21.97■■□□□ 1.11
LINC01088-201ENST00000437737 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.97■■□□□ 1.11
LINC01088-201ENST00000437737 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
LINC01088-201ENST00000437737 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
LINC01088-201ENST00000437737 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
LINC01088-201ENST00000437737 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
LINC01088-201ENST00000437737 ADGRL2O95490 1459 aa21.93■■□□□ 1.1
LINC01088-201ENST00000437737 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
LINC01088-201ENST00000437737 ATF3P18847 181 aa21.93■■□□□ 1.1
LINC01088-201ENST00000437737 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
LINC01088-201ENST00000437737 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC01088-201ENST00000437737 ANKRD50Q9ULJ7 1429 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 RXRBP28702 533 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
LINC01088-201ENST00000437737 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
LINC01088-201ENST00000437737 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
LINC01088-201ENST00000437737 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
LINC01088-201ENST00000437737 TRPM2O94759 1503 aa21.85■■□□□ 1.09
LINC01088-201ENST00000437737 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
LINC01088-201ENST00000437737 BRINP3Q76B58 766 aa21.84■■□□□ 1.09
LINC01088-201ENST00000437737 E9PCH4 1651 aa21.84■■□□□ 1.09
LINC01088-201ENST00000437737 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
LINC01088-201ENST00000437737 UNC13BO14795 1591 aa21.83■■□□□ 1.09
LINC01088-201ENST00000437737 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
LINC01088-201ENST00000437737 AFF2P51816 1311 aa21.81■■□□□ 1.08
LINC01088-201ENST00000437737 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
LINC01088-201ENST00000437737 DCCP43146 1447 aa21.79■■□□□ 1.08
LINC01088-201ENST00000437737 PTPRUQ92729 1446 aa21.79■■□□□ 1.08
LINC01088-201ENST00000437737 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
LINC01088-201ENST00000437737 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
LINC01088-201ENST00000437737 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
LINC01088-201ENST00000437737 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
LINC01088-201ENST00000437737 MST1RQ04912 1400 aa21.74■■□□□ 1.07
LINC01088-201ENST00000437737 LRRC59Q96AG4 307 aaKnown RBP21.74■■□□□ 1.07
LINC01088-201ENST00000437737 C8orf37Q96NL8 207 aa21.74■■□□□ 1.07
LINC01088-201ENST00000437737 RGS12O14924 1447 aa21.73■■□□□ 1.07
LINC01088-201ENST00000437737 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
LINC01088-201ENST00000437737 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
LINC01088-201ENST00000437737 QTRT2Q9H974 415 aaKnown RBP21.71■■□□□ 1.07
LINC01088-201ENST00000437737 SETBP1Q9Y6X0 1596 aa21.7■■□□□ 1.06
LINC01088-201ENST00000437737 PNPLA6Q8IY17 1366 aa21.69■■□□□ 1.06
LINC01088-201ENST00000437737 DDX17Q92841 729 aaKnown RBP21.68■■□□□ 1.06
LINC01088-201ENST00000437737 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
LINC01088-201ENST00000437737 NUP155O75694 1391 aa21.66■■□□□ 1.06
LINC01088-201ENST00000437737 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
LINC01088-201ENST00000437737 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
LINC01088-201ENST00000437737 SPHKAPQ2M3C7 1700 aa21.65■■□□□ 1.06
LINC01088-201ENST00000437737 METP08581 1390 aa21.64■■□□□ 1.06
LINC01088-201ENST00000437737 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
LINC01088-201ENST00000437737 NGLY1Q96IV0 654 aa21.64■■□□□ 1.05
LINC01088-201ENST00000437737 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
LINC01088-201ENST00000437737 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
LINC01088-201ENST00000437737 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
LINC01088-201ENST00000437737 USP21Q9UK80 565 aa21.57■■□□□ 1.04
LINC01088-201ENST00000437737 LAMC1P11047 1609 aa21.56■■□□□ 1.04
LINC01088-201ENST00000437737 FOXD1Q16676 465 aa21.56■■□□□ 1.04
LINC01088-201ENST00000437737 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
LINC01088-201ENST00000437737 TRPC5Q9UL62 973 aaPredicted RBP21.55■■□□□ 1.04
LINC01088-201ENST00000437737 ITGAEP38570 1179 aa21.54■■□□□ 1.04
LINC01088-201ENST00000437737 KIF1BO60333 1816 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 CLTCL1P53675 1640 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
LINC01088-201ENST00000437737 SOS2Q07890 1332 aaPredicted RBP21.52■■□□□ 1.03
LINC01088-201ENST00000437737 ORAI2Q96SN7 254 aa21.51■■□□□ 1.03
LINC01088-201ENST00000437737 COL22A1Q8NFW1 1626 aaPredicted RBP21.49■■□□□ 1.03
LINC01088-201ENST00000437737 ATRNO75882 1429 aa21.48■■□□□ 1.03
LINC01088-201ENST00000437737 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
LINC01088-201ENST00000437737 ROBO2Q9HCK4 1378 aa21.46■■□□□ 1.03
LINC01088-201ENST00000437737 MARF1Q9Y4F3 1742 aaKnown RBP21.46■■□□□ 1.03
LINC01088-201ENST00000437737 SRCAPQ6ZRS2 3230 aa21.44■■□□□ 1.02
LINC01088-201ENST00000437737 MYOM2P54296 1465 aa21.42■■□□□ 1.02
LINC01088-201ENST00000437737 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms