RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NCOA2Q15596 1464 aa19.53■□□□□ 0.72
PTPN13-204ENST00000436978 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
PTPN13-204ENST00000436978 FAM69CQ0P6D2 419 aa19.53■□□□□ 0.72
PTPN13-204ENST00000436978 GOLGA6L3A6NEY3 463 aa19.53■□□□□ 0.72
PTPN13-204ENST00000436978 IFT140Q96RY7 1462 aa19.52■□□□□ 0.72
PTPN13-204ENST00000436978 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
PTPN13-204ENST00000436978 IGF1RP08069 1367 aa19.52■□□□□ 0.72
PTPN13-204ENST00000436978 SYNE3Q6ZMZ3 975 aa19.52■□□□□ 0.72
PTPN13-204ENST00000436978 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
PTPN13-204ENST00000436978 ATF3P18847 181 aa19.51■□□□□ 0.71
PTPN13-204ENST00000436978 RILPL2Q969X0 211 aa19.51■□□□□ 0.71
PTPN13-204ENST00000436978 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
PTPN13-204ENST00000436978 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
PTPN13-204ENST00000436978 GZF1Q9H116 711 aaPredicted RBP19.5■□□□□ 0.71
PTPN13-204ENST00000436978 ANKRD45Q5TZF3 282 aa19.5■□□□□ 0.71
PTPN13-204ENST00000436978 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
PTPN13-204ENST00000436978 DIAPH3Q9NSV4 1193 aa19.5■□□□□ 0.71
PTPN13-204ENST00000436978 DEKP35659 375 aaKnown RBP19.5■□□□□ 0.71
PTPN13-204ENST00000436978 SCAPERQ9BY12 1400 aa19.49■□□□□ 0.71
PTPN13-204ENST00000436978 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
PTPN13-204ENST00000436978 TPM2P07951 284 aa19.49■□□□□ 0.71
PTPN13-204ENST00000436978 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
PTPN13-204ENST00000436978 ANKRD50Q9ULJ7 1429 aa19.49■□□□□ 0.71
PTPN13-204ENST00000436978 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
PTPN13-204ENST00000436978 CEP89Q96ST8 783 aa19.48■□□□□ 0.71
PTPN13-204ENST00000436978 REC8O95072 547 aa19.48■□□□□ 0.71
PTPN13-204ENST00000436978 GOLGA6L1Q8N7Z2 621 aa19.47■□□□□ 0.71
PTPN13-204ENST00000436978 TCEAL9Q9UHQ7 104 aa19.47■□□□□ 0.71
PTPN13-204ENST00000436978 VPS37DQ86XT2 251 aa19.47■□□□□ 0.71
PTPN13-204ENST00000436978 SMG6Q86US8 1419 aaKnown RBP19.47■□□□□ 0.71
PTPN13-204ENST00000436978 TPM3P06753 285 aa19.46■□□□□ 0.71
PTPN13-204ENST00000436978 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
PTPN13-204ENST00000436978 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
PTPN13-204ENST00000436978 TPD52L1Q16890 204 aaPredicted RBP19.46■□□□□ 0.71
PTPN13-204ENST00000436978 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
PTPN13-204ENST00000436978 NOL8Q76FK4 1167 aaKnown RBP19.46■□□□□ 0.71
PTPN13-204ENST00000436978 RUNDC1Q96C34 613 aa19.46■□□□□ 0.71
PTPN13-204ENST00000436978 CPLX2Q6PUV4 134 aaKnown RBP19.46■□□□□ 0.71
PTPN13-204ENST00000436978 TSR1Q2NL82 804 aaKnown RBP19.45■□□□□ 0.7
PTPN13-204ENST00000436978 PRKRIP1Q9H875 184 aaPredicted RBP19.45■□□□□ 0.7
PTPN13-204ENST00000436978 MSH5O43196 834 aa19.44■□□□□ 0.7
PTPN13-204ENST00000436978 TRIM29Q14134 588 aa19.43■□□□□ 0.7
PTPN13-204ENST00000436978 IFIT2P09913 472 aaKnown RBP19.43■□□□□ 0.7
PTPN13-204ENST00000436978 SKOR2Q2VWA4 1001 aaPredicted RBP19.43■□□□□ 0.7
PTPN13-204ENST00000436978 ZKSCAN1P17029 563 aaPredicted RBP19.43■□□□□ 0.7
PTPN13-204ENST00000436978 RIPK4P57078 832 aa19.43■□□□□ 0.7
PTPN13-204ENST00000436978 AAMPQ13685 434 aa19.43■□□□□ 0.7
PTPN13-204ENST00000436978 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
PTPN13-204ENST00000436978 CREBRFQ8IUR6 639 aa19.42■□□□□ 0.7
PTPN13-204ENST00000436978 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
PTPN13-204ENST00000436978 RNF20Q5VTR2 975 aa19.42■□□□□ 0.7
PTPN13-204ENST00000436978 EIF2S2P20042 333 aaKnown RBP19.42■□□□□ 0.7
PTPN13-204ENST00000436978 A0A0U1RQG5 324 aaPredicted RBP19.42■□□□□ 0.7
PTPN13-204ENST00000436978 TPM1P09493 284 aa19.41■□□□□ 0.7
PTPN13-204ENST00000436978 CFTRP13569 1480 aa19.41■□□□□ 0.7
PTPN13-204ENST00000436978 GNAI1P63096 354 aa19.41■□□□□ 0.7
PTPN13-204ENST00000436978 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
PTPN13-204ENST00000436978 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
PTPN13-204ENST00000436978 HOOK1Q9UJC3 728 aaKnown RBP19.4■□□□□ 0.7
PTPN13-204ENST00000436978 GPRASP1Q5JY77 1395 aa19.4■□□□□ 0.7
PTPN13-204ENST00000436978 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
PTPN13-204ENST00000436978 SYTL4Q96C24 671 aaPredicted RBP19.4■□□□□ 0.7
PTPN13-204ENST00000436978 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
PTPN13-204ENST00000436978 RAPGEF4Q8WZA2 1011 aa19.4■□□□□ 0.7
PTPN13-204ENST00000436978 G3BP1Q13283 466 aaKnown RBP eCLIP19.39■□□□□ 0.7
PTPN13-204ENST00000436978 GOLGA6L19H0YKK7 550 aa19.39■□□□□ 0.7
PTPN13-204ENST00000436978 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.7
PTPN13-204ENST00000436978 KIF14Q15058 1648 aa19.39■□□□□ 0.69
PTPN13-204ENST00000436978 TRDNQ13061 729 aa19.38■□□□□ 0.69
PTPN13-204ENST00000436978 DZIP1LQ8IYY4 767 aaKnown RBP19.38■□□□□ 0.69
PTPN13-204ENST00000436978 ELL2O00472 640 aaPredicted RBP19.37■□□□□ 0.69
PTPN13-204ENST00000436978 BCL2L13Q9BXK5 485 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 ERICH2A1L162 156 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 ERC2O15083 957 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
PTPN13-204ENST00000436978 C9orf84Q5VXU9 1444 aa19.36■□□□□ 0.69
PTPN13-204ENST00000436978 CCDC47Q96A33 483 aaKnown RBP19.36■□□□□ 0.69
PTPN13-204ENST00000436978 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
PTPN13-204ENST00000436978 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
PTPN13-204ENST00000436978 FKBP5Q13451 457 aaPredicted RBP19.35■□□□□ 0.69
PTPN13-204ENST00000436978 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
PTPN13-204ENST00000436978 PRM3Q9NNZ6 103 aa19.35■□□□□ 0.69
PTPN13-204ENST00000436978 PES1O00541 588 aaKnown RBP19.35■□□□□ 0.69
PTPN13-204ENST00000436978 APPP05067 770 aa19.35■□□□□ 0.69
PTPN13-204ENST00000436978 ANO2Q9NQ90 1003 aa19.35■□□□□ 0.69
PTPN13-204ENST00000436978 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
PTPN13-204ENST00000436978 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
PTPN13-204ENST00000436978 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
PTPN13-204ENST00000436978 APAF1O14727 1248 aa19.34■□□□□ 0.69
PTPN13-204ENST00000436978 MCTP1Q6DN14 999 aa19.33■□□□□ 0.69
PTPN13-204ENST00000436978 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.69
PTPN13-204ENST00000436978 ANKRD20A12PQ8NF67 263 aa19.33■□□□□ 0.68
PTPN13-204ENST00000436978 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
PTPN13-204ENST00000436978 CPLX1O14810 134 aa19.32■□□□□ 0.68
PTPN13-204ENST00000436978 CCDC70Q6NSX1 233 aa19.32■□□□□ 0.68
PTPN13-204ENST00000436978 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
PTPN13-204ENST00000436978 UNC13AQ9UPW8 1703 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms