RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
HMGB3P10-201ENST00000434734 PHF14O94880 888 aa8.16□□□□□ -1.1
HMGB3P10-201ENST00000434734 AMOTL2Q9Y2J4 779 aa8.16□□□□□ -1.1
HMGB3P10-201ENST00000434734 IRF6O14896 467 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 PTPREP23469 700 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 PSEN2P49810 448 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 PDIA6Q15084 440 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 KCNK17Q96T54 332 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 EPAS1Q99814 870 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 SLC4A5Q9BY07 1137 aa8.15□□□□□ -1.1
HMGB3P10-201ENST00000434734 PPP1R15AO75807 674 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P10-201ENST00000434734 TYW1BQ6NUM6 668 aa8.14□□□□□ -1.11
HMGB3P10-201ENST00000434734 RNF166Q96A37 237 aaPredicted RBP8.14□□□□□ -1.11
HMGB3P10-201ENST00000434734 PCDHGA10Q9Y5H3 936 aa8.14□□□□□ -1.11
HMGB3P10-201ENST00000434734 KCNA1Q09470 495 aa8.13□□□□□ -1.11
HMGB3P10-201ENST00000434734 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
HMGB3P10-201ENST00000434734 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
HMGB3P10-201ENST00000434734 ZNF330Q9Y3S2 320 aaPredicted RBP8.13□□□□□ -1.11
HMGB3P10-201ENST00000434734 SH3D19Q5HYK7 790 aa8.12□□□□□ -1.11
HMGB3P10-201ENST00000434734 GIGYF2Q6Y7W6 1299 aaKnown RBP8.12□□□□□ -1.11
HMGB3P10-201ENST00000434734 ADAM33Q9BZ11 813 aa8.12□□□□□ -1.11
HMGB3P10-201ENST00000434734 CARNS1A5YM72 827 aa8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 FECHP22830 423 aa8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 DHX37Q8IY37 1157 aaKnown RBP8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 REPIN1Q9BWE0 567 aaKnown RBP8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 IGSF5Q9NSI5 407 aa8.11□□□□□ -1.11
HMGB3P10-201ENST00000434734 HRO43593 1189 aa8.1□□□□□ -1.11
HMGB3P10-201ENST00000434734 BRD1O95696 1058 aa8.1□□□□□ -1.11
HMGB3P10-201ENST00000434734 VPS9D1Q9Y2B5 631 aa8.1□□□□□ -1.11
HMGB3P10-201ENST00000434734 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.11
HMGB3P10-201ENST00000434734 IVNS1ABPQ9Y6Y0 642 aa8.09□□□□□ -1.11
HMGB3P10-201ENST00000434734 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P10-201ENST00000434734 ZBED2Q9BTP6 218 aa8.08□□□□□ -1.12
HMGB3P10-201ENST00000434734 ACIN1Q9UKV3 1341 aaKnown RBP8.07□□□□□ -1.12
HMGB3P10-201ENST00000434734 STAC3Q96MF2 364 aa8.07□□□□□ -1.12
HMGB3P10-201ENST00000434734 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 SPDYE5A6NIY4 337 aa8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 PDE4CQ08493 712 aa8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 SND1Q7KZF4 910 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 DDX12PQ92771 950 aa8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 SNRKQ9NRH2 765 aa8.06□□□□□ -1.12
HMGB3P10-201ENST00000434734 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
HMGB3P10-201ENST00000434734 CCDC125Q86Z20 511 aa8.05□□□□□ -1.12
HMGB3P10-201ENST00000434734 POM121CA8CG34 1229 aa8.04□□□□□ -1.12
HMGB3P10-201ENST00000434734 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P10-201ENST00000434734 GNPATO15228 680 aa8.04□□□□□ -1.12
HMGB3P10-201ENST00000434734 EN1Q05925 392 aaPredicted RBP8.04□□□□□ -1.12
HMGB3P10-201ENST00000434734 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
HMGB3P10-201ENST00000434734 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
HMGB3P10-201ENST00000434734 POLR3GLQ9BT43 218 aa8.03□□□□□ -1.12
HMGB3P10-201ENST00000434734 NBPF3Q9H094 633 aa8.03□□□□□ -1.12
HMGB3P10-201ENST00000434734 PPM1GO15355 546 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P10-201ENST00000434734 COL9A1P20849 921 aa8.02□□□□□ -1.13
HMGB3P10-201ENST00000434734 RABGEF1Q9UJ41 708 aa8.02□□□□□ -1.13
HMGB3P10-201ENST00000434734 USTQ9Y2C2 406 aa8.02□□□□□ -1.13
HMGB3P10-201ENST00000434734 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P10-201ENST00000434734 GLMNQ92990 594 aa8.01□□□□□ -1.13
HMGB3P10-201ENST00000434734 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
HMGB3P10-201ENST00000434734 KIAA1522Q9P206 1035 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P10-201ENST00000434734 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
HMGB3P10-201ENST00000434734 MAP3K7O43318 606 aa8□□□□□ -1.13
HMGB3P10-201ENST00000434734 MRPL50Q8N5N7 158 aaKnown RBP8□□□□□ -1.13
HMGB3P10-201ENST00000434734 CERKQ8TCT0 537 aa8□□□□□ -1.13
HMGB3P10-201ENST00000434734 RBM33Q96EV2 1170 aaKnown RBP8□□□□□ -1.13
HMGB3P10-201ENST00000434734 GDPD2Q9HCC8 539 aa8□□□□□ -1.13
HMGB3P10-201ENST00000434734 ATP1B4Q9UN42 357 aaPredicted RBP8□□□□□ -1.13
HMGB3P10-201ENST00000434734 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
HMGB3P10-201ENST00000434734 RBM47A0AV96 593 aaKnown RBP7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 OSBPP22059 807 aa7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 RFX1P22670 979 aa7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 FBXO31Q5XUX0 539 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
HMGB3P10-201ENST00000434734 GOLGA8CPA6NN73 597 aa7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 TRIM6-TRIM34B2RNG4 842 aa7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 HIC1Q14526 733 aa7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 PROX2Q3B8N5 592 aa7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGB3P10-201ENST00000434734 SRPK2P78362 688 aaKnown RBP7.96□□□□□ -1.14
HMGB3P10-201ENST00000434734 TSR1Q2NL82 804 aaKnown RBP7.96□□□□□ -1.14
HMGB3P10-201ENST00000434734 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
HMGB3P10-201ENST00000434734 TMUB1Q9BVT8 246 aa7.96□□□□□ -1.14
HMGB3P10-201ENST00000434734 CWC22Q9HCG8 908 aaKnown RBP7.96□□□□□ -1.14
HMGB3P10-201ENST00000434734 FCHSD2O94868 740 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 BRD2P25440 801 aaKnown RBP7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 RFC5P40937 340 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 PACS2Q86VP3 889 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 MTMR14Q8NCE2 650 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 BANK1Q8NDB2 785 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
HMGB3P10-201ENST00000434734 SMARCA5O60264 1052 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P10-201ENST00000434734 ABL2P42684 1182 aa7.93□□□□□ -1.14
HMGB3P10-201ENST00000434734 PRIM1P49642 420 aaKnown RBP7.93□□□□□ -1.14
HMGB3P10-201ENST00000434734 CFAP70Q5T0N1 1121 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms