RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 NEXMIFQ5QGS0 1516 aa21.86■■□□□ 1.09
RBM39-213ENST00000433027 PTPRMP28827 1452 aa21.85■■□□□ 1.09
RBM39-213ENST00000433027 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
RBM39-213ENST00000433027 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.85■■□□□ 1.09
RBM39-213ENST00000433027 LAMC1P11047 1609 aa21.84■■□□□ 1.09
RBM39-213ENST00000433027 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
RBM39-213ENST00000433027 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
RBM39-213ENST00000433027 UBR1Q8IWV7 1749 aa21.83■■□□□ 1.09
RBM39-213ENST00000433027 TRPM1Q7Z4N2 1603 aa21.83■■□□□ 1.08
RBM39-213ENST00000433027 MYO3AQ8NEV4 1616 aa21.83■■□□□ 1.08
RBM39-213ENST00000433027 KDM2AQ9Y2K7 1162 aa21.82■■□□□ 1.08
RBM39-213ENST00000433027 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
RBM39-213ENST00000433027 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
RBM39-213ENST00000433027 PIK3C2GO75747 1445 aa21.8■■□□□ 1.08
RBM39-213ENST00000433027 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
RBM39-213ENST00000433027 THEMISQ8N1K5 641 aaPredicted RBP21.79■■□□□ 1.08
RBM39-213ENST00000433027 SLIT1O75093 1534 aa21.79■■□□□ 1.08
RBM39-213ENST00000433027 TMEM2Q9UHN6 1383 aa21.78■■□□□ 1.08
RBM39-213ENST00000433027 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
RBM39-213ENST00000433027 RIMS2Q9UQ26 1411 aa21.77■■□□□ 1.08
RBM39-213ENST00000433027 SETBP1Q9Y6X0 1596 aa21.77■■□□□ 1.08
RBM39-213ENST00000433027 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.07
RBM39-213ENST00000433027 ROCK2O75116 1388 aaKnown RBP21.76■■□□□ 1.07
RBM39-213ENST00000433027 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
RBM39-213ENST00000433027 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
RBM39-213ENST00000433027 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
RBM39-213ENST00000433027 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
RBM39-213ENST00000433027 CARD11Q9BXL7 1154 aa21.71■■□□□ 1.07
RBM39-213ENST00000433027 EID1Q9Y6B2 187 aa21.71■■□□□ 1.07
RBM39-213ENST00000433027 SLC24A1O60721 1099 aa21.69■■□□□ 1.06
RBM39-213ENST00000433027 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
RBM39-213ENST00000433027 USP47Q96K76 1375 aa21.67■■□□□ 1.06
RBM39-213ENST00000433027 PLEKHG1Q9ULL1 1385 aa21.67■■□□□ 1.06
RBM39-213ENST00000433027 SCAF11Q99590 1463 aaKnown RBP21.66■■□□□ 1.06
RBM39-213ENST00000433027 ADGRB1O14514 1584 aa21.64■■□□□ 1.05
RBM39-213ENST00000433027 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
RBM39-213ENST00000433027 DIP2AQ14689 1571 aa21.63■■□□□ 1.05
RBM39-213ENST00000433027 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
RBM39-213ENST00000433027 ALKQ9UM73 1620 aa21.62■■□□□ 1.05
RBM39-213ENST00000433027 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
RBM39-213ENST00000433027 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
RBM39-213ENST00000433027 HSPA5P11021 654 aaKnown RBP21.61■■□□□ 1.05
RBM39-213ENST00000433027 TXNDC2Q86VQ3 553 aa21.61■■□□□ 1.05
RBM39-213ENST00000433027 ANKLE2Q86XL3 938 aa21.6■■□□□ 1.05
RBM39-213ENST00000433027 NRXN3Q9Y4C0 1643 aa21.58■■□□□ 1.04
RBM39-213ENST00000433027 SBNO2Q9Y2G9 1366 aa21.57■■□□□ 1.04
RBM39-213ENST00000433027 SETD1AO15047 1707 aaKnown RBP21.57■■□□□ 1.04
RBM39-213ENST00000433027 MED14O60244 1454 aa21.57■■□□□ 1.04
RBM39-213ENST00000433027 LTKP29376 864 aa21.56■■□□□ 1.04
RBM39-213ENST00000433027 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
RBM39-213ENST00000433027 TBX22Q9Y458 520 aa21.55■■□□□ 1.04
RBM39-213ENST00000433027 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
RBM39-213ENST00000433027 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
RBM39-213ENST00000433027 SIRT1Q96EB6 747 aa21.54■■□□□ 1.04
RBM39-213ENST00000433027 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
RBM39-213ENST00000433027 ADAMTS13Q76LX8 1427 aa21.54■■□□□ 1.04
RBM39-213ENST00000433027 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
RBM39-213ENST00000433027 ABCC11Q96J66 1382 aa21.52■■□□□ 1.04
RBM39-213ENST00000433027 TECPR2O15040 1411 aa21.52■■□□□ 1.04
RBM39-213ENST00000433027 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.04
RBM39-213ENST00000433027 ASXL1Q8IXJ9 1541 aa21.51■■□□□ 1.03
RBM39-213ENST00000433027 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
RBM39-213ENST00000433027 KNDC1Q76NI1 1749 aa21.5■■□□□ 1.03
RBM39-213ENST00000433027 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
RBM39-213ENST00000433027 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
RBM39-213ENST00000433027 CENPJQ9HC77 1338 aaPredicted RBP21.47■■□□□ 1.03
RBM39-213ENST00000433027 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
RBM39-213ENST00000433027 LMTK3Q96Q04 1460 aa21.46■■□□□ 1.03
RBM39-213ENST00000433027 TMF1P82094 1093 aa21.46■■□□□ 1.03
RBM39-213ENST00000433027 BCANQ96GW7 911 aa21.46■■□□□ 1.03
RBM39-213ENST00000433027 TESK2Q96S53 571 aa21.46■■□□□ 1.03
RBM39-213ENST00000433027 NPHP4O75161 1426 aaPredicted RBP21.46■■□□□ 1.03
RBM39-213ENST00000433027 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
RBM39-213ENST00000433027 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
RBM39-213ENST00000433027 CPS1P31327 1500 aa21.44■■□□□ 1.02
RBM39-213ENST00000433027 METP08581 1390 aa21.43■■□□□ 1.02
RBM39-213ENST00000433027 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
RBM39-213ENST00000433027 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
RBM39-213ENST00000433027 PTCH1Q13635 1447 aa21.41■■□□□ 1.02
RBM39-213ENST00000433027 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
RBM39-213ENST00000433027 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
RBM39-213ENST00000433027 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
RBM39-213ENST00000433027 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
RBM39-213ENST00000433027 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
RBM39-213ENST00000433027 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
RBM39-213ENST00000433027 POGKQ9P215 609 aa21.35■■□□□ 1.01
RBM39-213ENST00000433027 CHD2O14647 1828 aaKnown RBP21.34■■□□□ 1.01
RBM39-213ENST00000433027 EVC2Q86UK5 1308 aa21.34■■□□□ 1.01
RBM39-213ENST00000433027 STK26Q9P289 416 aa21.34■■□□□ 1.01
RBM39-213ENST00000433027 DIEXFQ68CQ4 756 aaKnown RBP21.33■■□□□ 1.01
RBM39-213ENST00000433027 PRAM1Q96QH2 718 aa21.33■■□□□ 1.01
RBM39-213ENST00000433027 NWD1Q149M9 1564 aa21.32■■□□□ 1
RBM39-213ENST00000433027 PTPRUQ92729 1446 aa21.32■■□□□ 1
RBM39-213ENST00000433027 C11orf95C9JLR9 678 aaPredicted RBP21.32■■□□□ 1
RBM39-213ENST00000433027 HSPA2P54652 639 aa21.32■■□□□ 1
RBM39-213ENST00000433027 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
RBM39-213ENST00000433027 AMOTL2Q9Y2J4 779 aa21.31■■□□□ 1
RBM39-213ENST00000433027 DMRT2Q9Y5R5 561 aa21.31■■□□□ 1
RBM39-213ENST00000433027 DISP3Q9P2K9 1392 aa21.31■■□□□ 1
RBM39-213ENST00000433027 NINLQ9Y2I6 1382 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms