RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 LRRFIP1Q32MZ4 808 aaKnown RBP16.47■□□□□ 0.23
CDK12-201ENST00000430627 WWC3Q9ULE0 1092 aa16.47■□□□□ 0.23
CDK12-201ENST00000430627 H3BQV1 296 aa16.46■□□□□ 0.23
CDK12-201ENST00000430627 IFFO2Q5TF58 517 aa16.46■□□□□ 0.23
CDK12-201ENST00000430627 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
CDK12-201ENST00000430627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
CDK12-201ENST00000430627 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
CDK12-201ENST00000430627 ABTB2Q8N961 1025 aa16.46■□□□□ 0.23
CDK12-201ENST00000430627 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
CDK12-201ENST00000430627 TRIM29Q14134 588 aa16.46■□□□□ 0.22
CDK12-201ENST00000430627 NEUROD6Q96NK8 337 aa16.46■□□□□ 0.22
CDK12-201ENST00000430627 GLIPR1L2Q4G1C9 344 aa16.45■□□□□ 0.22
CDK12-201ENST00000430627 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
CDK12-201ENST00000430627 XPCQ01831 940 aaPredicted RBP16.44■□□□□ 0.22
CDK12-201ENST00000430627 TPM3P06753 285 aa16.44■□□□□ 0.22
CDK12-201ENST00000430627 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
CDK12-201ENST00000430627 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
CDK12-201ENST00000430627 NLRP6P59044 892 aa16.43■□□□□ 0.22
CDK12-201ENST00000430627 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
CDK12-201ENST00000430627 MCTP1Q6DN14 999 aa16.42■□□□□ 0.22
CDK12-201ENST00000430627 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
CDK12-201ENST00000430627 PTPRGP23470 1445 aa16.42■□□□□ 0.22
CDK12-201ENST00000430627 CCDC47Q96A33 483 aaKnown RBP16.42■□□□□ 0.22
CDK12-201ENST00000430627 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
CDK12-201ENST00000430627 EEA1Q15075 1411 aa16.41■□□□□ 0.22
CDK12-201ENST00000430627 KIF16BQ96L93 1317 aa16.41■□□□□ 0.22
CDK12-201ENST00000430627 TRDNQ13061 729 aa16.41■□□□□ 0.22
CDK12-201ENST00000430627 SCLT1Q96NL6 688 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
CDK12-201ENST00000430627 PMFBP1Q8TBY8 1022 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 WASHC4Q2M389 1173 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 ANKLE2Q86XL3 938 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 VTI1AQ96AJ9 217 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 DCAF1Q9Y4B6 1507 aa16.4■□□□□ 0.22
CDK12-201ENST00000430627 RFX1P22670 979 aa16.39■□□□□ 0.21
CDK12-201ENST00000430627 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
CDK12-201ENST00000430627 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
CDK12-201ENST00000430627 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
CDK12-201ENST00000430627 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
CDK12-201ENST00000430627 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
CDK12-201ENST00000430627 TMOD2Q9NZR1 351 aa16.38■□□□□ 0.21
CDK12-201ENST00000430627 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
CDK12-201ENST00000430627 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
CDK12-201ENST00000430627 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
CDK12-201ENST00000430627 FOSBP53539 338 aa16.37■□□□□ 0.21
CDK12-201ENST00000430627 BAZ1AQ9NRL2 1556 aaPredicted RBP16.37■□□□□ 0.21
CDK12-201ENST00000430627 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDK12-201ENST00000430627 CABP4P57796 275 aa16.37■□□□□ 0.21
CDK12-201ENST00000430627 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■□□ 15.3
CDK12-201ENST00000430627 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
CDK12-201ENST00000430627 KIF3AQ9Y496 699 aa16.37■□□□□ 0.21
CDK12-201ENST00000430627 THEMISQ8N1K5 641 aaPredicted RBP16.36■□□□□ 0.21
CDK12-201ENST00000430627 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
CDK12-201ENST00000430627 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
CDK12-201ENST00000430627 PHF14O94880 888 aa16.35■□□□□ 0.21
CDK12-201ENST00000430627 CPLX1O14810 134 aa16.35■□□□□ 0.21
CDK12-201ENST00000430627 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
CDK12-201ENST00000430627 ZPR1O75312 459 aa16.34■□□□□ 0.21
CDK12-201ENST00000430627 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
CDK12-201ENST00000430627 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
CDK12-201ENST00000430627 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
CDK12-201ENST00000430627 RWDD1Q9H446 243 aaPredicted RBP16.32■□□□□ 0.2
CDK12-201ENST00000430627 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
CDK12-201ENST00000430627 EPS15P42566 896 aa16.32■□□□□ 0.2
CDK12-201ENST00000430627 MFAP1P55081 439 aaKnown RBP16.31■□□□□ 0.2
CDK12-201ENST00000430627 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
CDK12-201ENST00000430627 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
CDK12-201ENST00000430627 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
CDK12-201ENST00000430627 GNL3LQ9NVN8 582 aaKnown RBP16.3■□□□□ 0.2
CDK12-201ENST00000430627 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 NEBLO76041 1014 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 POLD1P28340 1107 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 NBPF8Q3BBV2 869 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CDK12-201ENST00000430627 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.24e-9■■■□□ 15.7
CDK12-201ENST00000430627 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
CDK12-201ENST00000430627 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
CDK12-201ENST00000430627 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
CDK12-201ENST00000430627 TTC16Q8NEE8 873 aa16.28■□□□□ 0.2
CDK12-201ENST00000430627 BCL2L13Q9BXK5 485 aa16.28■□□□□ 0.2
CDK12-201ENST00000430627 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
CDK12-201ENST00000430627 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
CDK12-201ENST00000430627 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
CDK12-201ENST00000430627 NAP1L5Q96NT1 182 aaPredicted RBP16.27■□□□□ 0.2
CDK12-201ENST00000430627 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.2
CDK12-201ENST00000430627 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
CDK12-201ENST00000430627 UACAQ9BZF9 1416 aa16.27■□□□□ 0.19
CDK12-201ENST00000430627 DRC1Q96MC2 740 aa16.27■□□□□ 0.19
CDK12-201ENST00000430627 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
CDK12-201ENST00000430627 TOM1O60784 492 aa16.26■□□□□ 0.19
CDK12-201ENST00000430627 HMOX1P09601 288 aa16.26■□□□□ 0.19
CDK12-201ENST00000430627 AK7Q96M32 723 aa16.26■□□□□ 0.19
CDK12-201ENST00000430627 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
CDK12-201ENST00000430627 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
CDK12-201ENST00000430627 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
CDK12-201ENST00000430627 NAP1L1P55209 391 aaKnown RBP16.25■□□□□ 0.19
CDK12-201ENST00000430627 C8orf37Q96NL8 207 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms