RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 AAMPQ13685 434 aa13.73□□□□□ -0.21
ATP2C1-204ENST00000428331 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
ATP2C1-204ENST00000428331 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
ATP2C1-204ENST00000428331 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
ATP2C1-204ENST00000428331 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.21
ATP2C1-204ENST00000428331 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
ATP2C1-204ENST00000428331 NUP160Q12769 1436 aa13.71□□□□□ -0.22
ATP2C1-204ENST00000428331 MORC1Q86VD1 984 aa13.71□□□□□ -0.22
ATP2C1-204ENST00000428331 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.22
ATP2C1-204ENST00000428331 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 ERCC6Q03468 1493 aa13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 EFCAB2Q5VUJ9 269 aa13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 CEP170Q5SW79 1584 aa13.7□□□□□ -0.22
ATP2C1-204ENST00000428331 KDM5DQ9BY66 1539 aa13.69□□□□□ -0.22
ATP2C1-204ENST00000428331 ATP10BO94823 1461 aa13.69□□□□□ -0.22
ATP2C1-204ENST00000428331 TNNT2P45379 298 aaPredicted RBP13.68□□□□□ -0.22
ATP2C1-204ENST00000428331 A2MP01023 1474 aa13.68□□□□□ -0.22
ATP2C1-204ENST00000428331 HSP90AA1P07900 732 aaKnown RBP13.68□□□□□ -0.22
ATP2C1-204ENST00000428331 SPRYD3Q8NCJ5 442 aa13.68□□□□□ -0.22
ATP2C1-204ENST00000428331 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
ATP2C1-204ENST00000428331 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
ATP2C1-204ENST00000428331 POGKQ9P215 609 aa13.67□□□□□ -0.22
ATP2C1-204ENST00000428331 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 IGHDP01880 384 aa13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 HSCBQ8IWL3 235 aa13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 KANK1Q14678 1352 aa13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 GZF1Q9H116 711 aaPredicted RBP13.66□□□□□ -0.22
ATP2C1-204ENST00000428331 ARHGAP5Q13017 1502 aa13.65□□□□□ -0.22
ATP2C1-204ENST00000428331 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-204ENST00000428331 PIK3C2GO75747 1445 aa13.65□□□□□ -0.22
ATP2C1-204ENST00000428331 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
ATP2C1-204ENST00000428331 CROCC2H7BZ55 1655 aa13.64□□□□□ -0.23
ATP2C1-204ENST00000428331 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-204ENST00000428331 ABCC10Q5T3U5 1492 aa13.64□□□□□ -0.23
ATP2C1-204ENST00000428331 ANP32BQ92688 251 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-204ENST00000428331 RUNDC1Q96C34 613 aa13.64□□□□□ -0.23
ATP2C1-204ENST00000428331 CHMP5Q9NZZ3 219 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 SCAPERQ9BY12 1400 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 ASXL1Q8IXJ9 1541 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 ADCY10Q96PN6 1610 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 MFAP1P55081 439 aaKnown RBP13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
ATP2C1-204ENST00000428331 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
ATP2C1-204ENST00000428331 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
ATP2C1-204ENST00000428331 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
ATP2C1-204ENST00000428331 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
ATP2C1-204ENST00000428331 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
ATP2C1-204ENST00000428331 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
ATP2C1-204ENST00000428331 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
ATP2C1-204ENST00000428331 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
ATP2C1-204ENST00000428331 E9PCH4 1651 aa13.6□□□□□ -0.23
ATP2C1-204ENST00000428331 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-204ENST00000428331 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
ATP2C1-204ENST00000428331 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
ATP2C1-204ENST00000428331 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
ATP2C1-204ENST00000428331 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATP2C1-204ENST00000428331 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
ATP2C1-204ENST00000428331 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
ATP2C1-204ENST00000428331 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.23
ATP2C1-204ENST00000428331 RARSP54136 660 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 SEC24BO95487 1268 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 MCM4P33991 863 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 TBC1D2Q9BYX2 928 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 SMC4Q9NTJ3 1288 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 DZIP1LQ8IYY4 767 aaKnown RBP13.58□□□□□ -0.24
ATP2C1-204ENST00000428331 PLA2R1Q13018 1463 aa13.57□□□□□ -0.24
ATP2C1-204ENST00000428331 GBP4Q96PP9 640 aa13.57□□□□□ -0.24
ATP2C1-204ENST00000428331 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
ATP2C1-204ENST00000428331 KIF3BO15066 747 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 MRE11P49959 708 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 CDC42BPAQ5VT25 1732 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 TRAK2O60296 914 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 SYCP2Q9BX26 1530 aa13.56□□□□□ -0.24
ATP2C1-204ENST00000428331 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-204ENST00000428331 PTMSP20962 102 aa13.55□□□□□ -0.24
ATP2C1-204ENST00000428331 U2SURPO15042 1029 aaKnown RBP13.55□□□□□ -0.24
ATP2C1-204ENST00000428331 DDX19BQ9UMR2 479 aa13.55□□□□□ -0.24
ATP2C1-204ENST00000428331 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
ATP2C1-204ENST00000428331 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
ATP2C1-204ENST00000428331 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
ATP2C1-204ENST00000428331 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-204ENST00000428331 TRAK1Q9UPV9 953 aa13.53□□□□□ -0.24
ATP2C1-204ENST00000428331 ABCA8O94911 1581 aa13.53□□□□□ -0.24
ATP2C1-204ENST00000428331 MTHFSP49914 203 aa13.53□□□□□ -0.24
ATP2C1-204ENST00000428331 LAMC1P11047 1609 aa13.52□□□□□ -0.24
ATP2C1-204ENST00000428331 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.24
ATP2C1-204ENST00000428331 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms