RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FGD6Q6ZV73 1430 aa22.45■■□□□ 1.18
HDAC6-206ENST00000426196 VPS8Q8N3P4 1428 aa22.44■■□□□ 1.18
HDAC6-206ENST00000426196 LRP6O75581 1613 aa22.43■■□□□ 1.18
HDAC6-206ENST00000426196 ABCC5O15440 1437 aa22.43■■□□□ 1.18
HDAC6-206ENST00000426196 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
HDAC6-206ENST00000426196 NOS1P29475 1434 aa22.42■■□□□ 1.18
HDAC6-206ENST00000426196 SRCAPQ6ZRS2 3230 aa22.41■■□□□ 1.18
HDAC6-206ENST00000426196 SHPRHQ149N8 1683 aa22.4■■□□□ 1.18
HDAC6-206ENST00000426196 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
HDAC6-206ENST00000426196 SLC52A1Q9NWF4 448 aa22.4■■□□□ 1.18
HDAC6-206ENST00000426196 MYO5BQ9ULV0 1848 aa22.4■■□□□ 1.18
HDAC6-206ENST00000426196 PTPN23Q9H3S7 1636 aa22.39■■□□□ 1.18
HDAC6-206ENST00000426196 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
HDAC6-206ENST00000426196 DAPK1P53355 1430 aa22.38■■□□□ 1.17
HDAC6-206ENST00000426196 NCOA3Q9Y6Q9 1424 aa22.38■■□□□ 1.17
HDAC6-206ENST00000426196 AHDC1Q5TGY3 1603 aaPredicted RBP22.38■■□□□ 1.17
HDAC6-206ENST00000426196 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
HDAC6-206ENST00000426196 PPP1R15AO75807 674 aaPredicted RBP22.36■■□□□ 1.17
HDAC6-206ENST00000426196 ANKRD30AQ9BXX3 1397 aa22.36■■□□□ 1.17
HDAC6-206ENST00000426196 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
HDAC6-206ENST00000426196 RXRBP28702 533 aa22.35■■□□□ 1.17
HDAC6-206ENST00000426196 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
HDAC6-206ENST00000426196 HDGFP51858 240 aaKnown RBP22.34■■□□□ 1.17
HDAC6-206ENST00000426196 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.34■■□□□ 1.17
HDAC6-206ENST00000426196 CADPS2Q86UW7 1296 aa22.33■■□□□ 1.17
HDAC6-206ENST00000426196 CDK12Q9NYV4 1490 aaPredicted RBP22.33■■□□□ 1.16
HDAC6-206ENST00000426196 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
HDAC6-206ENST00000426196 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
HDAC6-206ENST00000426196 ATF3P18847 181 aa22.31■■□□□ 1.16
HDAC6-206ENST00000426196 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
HDAC6-206ENST00000426196 CHIC2Q9UKJ5 165 aa22.29■■□□□ 1.16
HDAC6-206ENST00000426196 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
HDAC6-206ENST00000426196 C19orf44Q9H6X5 657 aa22.28■■□□□ 1.16
HDAC6-206ENST00000426196 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
HDAC6-206ENST00000426196 NUTM2BA6NNL0 878 aaPredicted RBP22.26■■□□□ 1.15
HDAC6-206ENST00000426196 NUTM2EB1AL46 878 aaPredicted RBP22.26■■□□□ 1.15
HDAC6-206ENST00000426196 NUTM2AQ8IVF1 878 aaPredicted RBP22.26■■□□□ 1.15
HDAC6-206ENST00000426196 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
HDAC6-206ENST00000426196 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
HDAC6-206ENST00000426196 AFF2P51816 1311 aa22.24■■□□□ 1.15
HDAC6-206ENST00000426196 BRINP3Q76B58 766 aa22.22■■□□□ 1.15
HDAC6-206ENST00000426196 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
HDAC6-206ENST00000426196 CHGAP10645 457 aaKnown RBP22.2■■□□□ 1.14
HDAC6-206ENST00000426196 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
HDAC6-206ENST00000426196 TRPM2O94759 1503 aa22.2■■□□□ 1.14
HDAC6-206ENST00000426196 DCCP43146 1447 aa22.19■■□□□ 1.14
HDAC6-206ENST00000426196 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
HDAC6-206ENST00000426196 APLP2Q06481 763 aa22.18■■□□□ 1.14
HDAC6-206ENST00000426196 NHSL1Q5SYE7 1610 aa22.17■■□□□ 1.14
HDAC6-206ENST00000426196 RGS12O14924 1447 aa22.17■■□□□ 1.14
HDAC6-206ENST00000426196 SETD5Q9C0A6 1442 aa22.17■■□□□ 1.14
HDAC6-206ENST00000426196 ANKRD50Q9ULJ7 1429 aa22.17■■□□□ 1.14
HDAC6-206ENST00000426196 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
HDAC6-206ENST00000426196 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
HDAC6-206ENST00000426196 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
HDAC6-206ENST00000426196 LRRC59Q96AG4 307 aaKnown RBP22.13■■□□□ 1.13
HDAC6-206ENST00000426196 C8orf37Q96NL8 207 aa22.13■■□□□ 1.13
HDAC6-206ENST00000426196 QTRT2Q9H974 415 aaKnown RBP22.13■■□□□ 1.13
HDAC6-206ENST00000426196 UNC13BO14795 1591 aa22.12■■□□□ 1.13
HDAC6-206ENST00000426196 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
HDAC6-206ENST00000426196 E9PCH4 1651 aa22.11■■□□□ 1.13
HDAC6-206ENST00000426196 MST1RQ04912 1400 aa22.1■■□□□ 1.13
HDAC6-206ENST00000426196 XRN1Q8IZH2 1706 aaKnown RBP22.1■■□□□ 1.13
HDAC6-206ENST00000426196 EP400Q96L91 3159 aa22.09■■□□□ 1.13
HDAC6-206ENST00000426196 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
HDAC6-206ENST00000426196 PNPLA6Q8IY17 1366 aa22.08■■□□□ 1.12
HDAC6-206ENST00000426196 LOC105371045A0A1W2PR82 267 aa22.07■■□□□ 1.12
HDAC6-206ENST00000426196 FOXD1Q16676 465 aa22.07■■□□□ 1.12
HDAC6-206ENST00000426196 NGLY1Q96IV0 654 aa22.07■■□□□ 1.12
HDAC6-206ENST00000426196 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
HDAC6-206ENST00000426196 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
HDAC6-206ENST00000426196 SETBP1Q9Y6X0 1596 aa22.03■■□□□ 1.12
HDAC6-206ENST00000426196 IQGAP3Q86VI3 1631 aa22.02■■□□□ 1.12
HDAC6-206ENST00000426196 ADGRL3Q9HAR2 1447 aa22.01■■□□□ 1.11
HDAC6-206ENST00000426196 ADAMTS2O95450 1211 aa22.01■■□□□ 1.11
HDAC6-206ENST00000426196 ZRANB1Q9UGI0 708 aa22.01■■□□□ 1.11
HDAC6-206ENST00000426196 DDX17Q92841 729 aaKnown RBP22■■□□□ 1.11
HDAC6-206ENST00000426196 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
HDAC6-206ENST00000426196 USP21Q9UK80 565 aa21.96■■□□□ 1.11
HDAC6-206ENST00000426196 TRPC5Q9UL62 973 aaPredicted RBP21.96■■□□□ 1.11
HDAC6-206ENST00000426196 LAMC1P11047 1609 aa21.95■■□□□ 1.1
HDAC6-206ENST00000426196 METP08581 1390 aa21.94■■□□□ 1.1
HDAC6-206ENST00000426196 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
HDAC6-206ENST00000426196 SPHKAPQ2M3C7 1700 aa21.93■■□□□ 1.1
HDAC6-206ENST00000426196 C1orf167Q5SNV9 1468 aa21.92■■□□□ 1.1
HDAC6-206ENST00000426196 ZNF326Q5BKZ1 582 aaKnown RBP21.92■■□□□ 1.1
HDAC6-206ENST00000426196 NUP155O75694 1391 aa21.91■■□□□ 1.1
HDAC6-206ENST00000426196 ATRNO75882 1429 aa21.9■■□□□ 1.1
HDAC6-206ENST00000426196 CCDC125Q86Z20 511 aa21.9■■□□□ 1.1
HDAC6-206ENST00000426196 SOS2Q07890 1332 aaPredicted RBP21.89■■□□□ 1.1
HDAC6-206ENST00000426196 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.09
HDAC6-206ENST00000426196 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
HDAC6-206ENST00000426196 COL22A1Q8NFW1 1626 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-206ENST00000426196 MARF1Q9Y4F3 1742 aaKnown RBP21.84■■□□□ 1.09
HDAC6-206ENST00000426196 ORAI2Q96SN7 254 aa21.83■■□□□ 1.09
HDAC6-206ENST00000426196 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
HDAC6-206ENST00000426196 KIF1BO60333 1816 aa21.8■■□□□ 1.08
HDAC6-206ENST00000426196 MYOM2P54296 1465 aa21.8■■□□□ 1.08
HDAC6-206ENST00000426196 BCL9LQ86UU0 1499 aa21.78■■□□□ 1.08
HDAC6-206ENST00000426196 CLTCL1P53675 1640 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 342.6 ms