RNA–Protein interactions for RNA: ENST00000425841.1

CLHC1-206, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-206ENST00000425841 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
CLHC1-206ENST00000425841 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
CLHC1-206ENST00000425841 RPRD2Q5VT52 1461 aaKnown RBP13.5□□□□□ -0.25
CLHC1-206ENST00000425841 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
CLHC1-206ENST00000425841 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
CLHC1-206ENST00000425841 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
CLHC1-206ENST00000425841 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
CLHC1-206ENST00000425841 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
CLHC1-206ENST00000425841 MSH6P52701 1360 aa13.48□□□□□ -0.25
CLHC1-206ENST00000425841 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
CLHC1-206ENST00000425841 LRP6O75581 1613 aa13.46□□□□□ -0.25
CLHC1-206ENST00000425841 JCADQ9P266 1359 aa13.46□□□□□ -0.25
CLHC1-206ENST00000425841 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.25
CLHC1-206ENST00000425841 SHPRHQ149N8 1683 aa13.46□□□□□ -0.26
CLHC1-206ENST00000425841 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.26
CLHC1-206ENST00000425841 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
CLHC1-206ENST00000425841 NCOA3Q9Y6Q9 1424 aa13.45□□□□□ -0.26
CLHC1-206ENST00000425841 UNC13BO14795 1591 aa13.45□□□□□ -0.26
CLHC1-206ENST00000425841 DIP2AQ14689 1571 aa13.45□□□□□ -0.26
CLHC1-206ENST00000425841 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
CLHC1-206ENST00000425841 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
CLHC1-206ENST00000425841 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
CLHC1-206ENST00000425841 ADAMTS13Q76LX8 1427 aa13.42□□□□□ -0.26
CLHC1-206ENST00000425841 ANKRD50Q9ULJ7 1429 aa13.42□□□□□ -0.26
CLHC1-206ENST00000425841 E9PCH4 1651 aa13.42□□□□□ -0.26
CLHC1-206ENST00000425841 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
CLHC1-206ENST00000425841 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CLHC1-206ENST00000425841 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
CLHC1-206ENST00000425841 IQGAP3Q86VI3 1631 aa13.39□□□□□ -0.27
CLHC1-206ENST00000425841 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
CLHC1-206ENST00000425841 BCANQ96GW7 911 aa13.38□□□□□ -0.27
CLHC1-206ENST00000425841 TRPM2O94759 1503 aa13.38□□□□□ -0.27
CLHC1-206ENST00000425841 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
CLHC1-206ENST00000425841 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
CLHC1-206ENST00000425841 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
CLHC1-206ENST00000425841 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
CLHC1-206ENST00000425841 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
CLHC1-206ENST00000425841 DCCP43146 1447 aa13.35□□□□□ -0.27
CLHC1-206ENST00000425841 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
CLHC1-206ENST00000425841 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
CLHC1-206ENST00000425841 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
CLHC1-206ENST00000425841 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
CLHC1-206ENST00000425841 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
CLHC1-206ENST00000425841 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLHC1-206ENST00000425841 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
CLHC1-206ENST00000425841 UPF1Q92900 1129 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLHC1-206ENST00000425841 C19orf44Q9H6X5 657 aa13.33□□□□□ -0.28
CLHC1-206ENST00000425841 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
CLHC1-206ENST00000425841 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
CLHC1-206ENST00000425841 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
CLHC1-206ENST00000425841 C14orf37Q86TY3 774 aa13.31□□□□□ -0.28
CLHC1-206ENST00000425841 MST1RQ04912 1400 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 ATF3P18847 181 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
CLHC1-206ENST00000425841 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 NALCNQ8IZF0 1738 aa13.3□□□□□ -0.28
CLHC1-206ENST00000425841 TRIM52Q96A61 297 aa13.29□□□□□ -0.28
CLHC1-206ENST00000425841 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
CLHC1-206ENST00000425841 AMOTL2Q9Y2J4 779 aa13.28□□□□□ -0.28
CLHC1-206ENST00000425841 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
CLHC1-206ENST00000425841 LAMC1P11047 1609 aa13.27□□□□□ -0.29
CLHC1-206ENST00000425841 RGS12O14924 1447 aa13.26□□□□□ -0.29
CLHC1-206ENST00000425841 RXRBP28702 533 aa13.26□□□□□ -0.29
CLHC1-206ENST00000425841 ADGRL3Q9HAR2 1447 aa13.25□□□□□ -0.29
CLHC1-206ENST00000425841 AFF2P51816 1311 aa13.25□□□□□ -0.29
CLHC1-206ENST00000425841 NEXMIFQ5QGS0 1516 aa13.24□□□□□ -0.29
CLHC1-206ENST00000425841 NUP155O75694 1391 aa13.23□□□□□ -0.29
CLHC1-206ENST00000425841 METP08581 1390 aa13.23□□□□□ -0.29
CLHC1-206ENST00000425841 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
CLHC1-206ENST00000425841 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
CLHC1-206ENST00000425841 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
CLHC1-206ENST00000425841 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
CLHC1-206ENST00000425841 CLTCL1P53675 1640 aa13.23□□□□□ -0.29
CLHC1-206ENST00000425841 ITGAEP38570 1179 aa13.22□□□□□ -0.29
CLHC1-206ENST00000425841 EP400Q96L91 3159 aa13.21□□□□□ -0.3
CLHC1-206ENST00000425841 RRBP1Q9P2E9 1410 aaKnown RBP13.21□□□□□ -0.3
CLHC1-206ENST00000425841 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
CLHC1-206ENST00000425841 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
CLHC1-206ENST00000425841 KIF1BO60333 1816 aa13.19□□□□□ -0.3
CLHC1-206ENST00000425841 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
CLHC1-206ENST00000425841 PTCH1Q13635 1447 aa13.19□□□□□ -0.3
CLHC1-206ENST00000425841 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
CLHC1-206ENST00000425841 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
CLHC1-206ENST00000425841 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
CLHC1-206ENST00000425841 C8orf37Q96NL8 207 aa13.18□□□□□ -0.3
CLHC1-206ENST00000425841 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
CLHC1-206ENST00000425841 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
CLHC1-206ENST00000425841 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
CLHC1-206ENST00000425841 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
CLHC1-206ENST00000425841 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
CLHC1-206ENST00000425841 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
CLHC1-206ENST00000425841 ATRNO75882 1429 aa13.13□□□□□ -0.31
CLHC1-206ENST00000425841 PPLO60437 1756 aa13.12□□□□□ -0.31
CLHC1-206ENST00000425841 MYOM2P54296 1465 aa13.12□□□□□ -0.31
CLHC1-206ENST00000425841 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
CLHC1-206ENST00000425841 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
CLHC1-206ENST00000425841 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
CLHC1-206ENST00000425841 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms