RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 ALKQ9UM73 1620 aa32.54■■■□□ 2.8
CDCP1-202ENST00000425231 PIP4K2BP78356 416 aa32.52■■■□□ 2.8
CDCP1-202ENST00000425231 PLEKHG1Q9ULL1 1385 aa32.51■■■□□ 2.8
CDCP1-202ENST00000425231 KCNA6P17658 529 aa32.51■■■□□ 2.79
CDCP1-202ENST00000425231 SPHKAPQ2M3C7 1700 aa32.5■■■□□ 2.79
CDCP1-202ENST00000425231 SCAF1Q9H7N4 1312 aaKnown RBP32.48■■■□□ 2.79
CDCP1-202ENST00000425231 XIRP1Q702N8 1843 aaKnown RBP32.48■■■□□ 2.79
CDCP1-202ENST00000425231 PPP1R15AO75807 674 aaPredicted RBP32.48■■■□□ 2.79
CDCP1-202ENST00000425231 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.48■■■□□ 2.79
CDCP1-202ENST00000425231 BCANQ96GW7 911 aa32.48■■■□□ 2.79
CDCP1-202ENST00000425231 SENP3Q9H4L4 574 aaPredicted RBP32.48■■■□□ 2.79
CDCP1-202ENST00000425231 NUTM2DQ5VT03 806 aaPredicted RBP32.44■■■□□ 2.78
CDCP1-202ENST00000425231 TRIM52Q96A61 297 aa32.43■■■□□ 2.78
CDCP1-202ENST00000425231 HSPA1LP34931 641 aa32.41■■■□□ 2.78
CDCP1-202ENST00000425231 TBX22Q9Y458 520 aa32.41■■■□□ 2.78
CDCP1-202ENST00000425231 NWD1Q149M9 1564 aa32.41■■■□□ 2.78
CDCP1-202ENST00000425231 TMEM94Q12767 1356 aa32.39■■■□□ 2.78
CDCP1-202ENST00000425231 TRPM2O94759 1503 aa32.38■■■□□ 2.77
CDCP1-202ENST00000425231 ADAMTS13Q76LX8 1427 aa32.37■■■□□ 2.77
CDCP1-202ENST00000425231 PROSER2Q86WR7 435 aaPredicted RBP32.37■■■□□ 2.77
CDCP1-202ENST00000425231 CHD2O14647 1828 aaKnown RBP32.37■■■□□ 2.77
CDCP1-202ENST00000425231 CLTCL1P53675 1640 aa32.36■■■□□ 2.77
CDCP1-202ENST00000425231 NKTRP30414 1462 aaKnown RBP32.36■■■□□ 2.77
CDCP1-202ENST00000425231 RBM33Q96EV2 1170 aaKnown RBP32.34■■■□□ 2.77
CDCP1-202ENST00000425231 SLC4A1APQ9BWU0 796 aaKnown RBP32.34■■■□□ 2.77
CDCP1-202ENST00000425231 DISP3Q9P2K9 1392 aa32.33■■■□□ 2.77
CDCP1-202ENST00000425231 DIP2AQ14689 1571 aa32.3■■■□□ 2.76
CDCP1-202ENST00000425231 ZNF326Q5BKZ1 582 aaKnown RBP32.3■■■□□ 2.76
CDCP1-202ENST00000425231 PIK3R4Q99570 1358 aa32.27■■■□□ 2.76
CDCP1-202ENST00000425231 KIF1BO60333 1816 aa32.26■■■□□ 2.75
CDCP1-202ENST00000425231 NRXN3Q9Y4C0 1643 aa32.24■■■□□ 2.75
CDCP1-202ENST00000425231 NEXMIFQ5QGS0 1516 aa32.23■■■□□ 2.75
CDCP1-202ENST00000425231 SETBP1Q9Y6X0 1596 aa32.22■■■□□ 2.75
CDCP1-202ENST00000425231 FOXD1Q16676 465 aa32.21■■■□□ 2.75
CDCP1-202ENST00000425231 FAM135BQ49AJ0 1406 aa32.19■■■□□ 2.74
CDCP1-202ENST00000425231 PTPRUQ92729 1446 aa32.19■■■□□ 2.74
CDCP1-202ENST00000425231 MPHOSPH9Q99550 1183 aa32.18■■■□□ 2.74
CDCP1-202ENST00000425231 MSH6P52701 1360 aa32.18■■■□□ 2.74
CDCP1-202ENST00000425231 AMOTL2Q9Y2J4 779 aa32.17■■■□□ 2.74
CDCP1-202ENST00000425231 NCOA3Q9Y6Q9 1424 aa32.17■■■□□ 2.74
CDCP1-202ENST00000425231 SETD5Q9C0A6 1442 aa32.14■■■□□ 2.74
CDCP1-202ENST00000425231 ILDR2Q71H61 639 aa32.14■■■□□ 2.74
CDCP1-202ENST00000425231 METP08581 1390 aa32.12■■■□□ 2.73
CDCP1-202ENST00000425231 RPGRIP1LQ68CZ1 1315 aa32.1■■■□□ 2.73
CDCP1-202ENST00000425231 ACIN1Q9UKV3 1341 aaKnown RBP32.1■■■□□ 2.73
CDCP1-202ENST00000425231 VGFO15240 615 aaPredicted RBP32.09■■■□□ 2.73
CDCP1-202ENST00000425231 SLAIN2Q9P270 581 aa32.09■■■□□ 2.73
CDCP1-202ENST00000425231 ROBO1Q9Y6N7 1651 aa32.09■■■□□ 2.73
CDCP1-202ENST00000425231 XRN1Q8IZH2 1706 aaKnown RBP32.08■■■□□ 2.73
CDCP1-202ENST00000425231 MED1Q15648 1581 aaPredicted RBP32.07■■■□□ 2.72
CDCP1-202ENST00000425231 C14orf37Q86TY3 774 aa32.06■■■□□ 2.72
CDCP1-202ENST00000425231 C19orf44Q9H6X5 657 aa32.06■■■□□ 2.72
CDCP1-202ENST00000425231 CCDC144AA2RUR9 1427 aa32.05■■■□□ 2.72
CDCP1-202ENST00000425231 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.04■■■□□ 2.72
CDCP1-202ENST00000425231 PPLO60437 1756 aa32.03■■■□□ 2.72
CDCP1-202ENST00000425231 RAB3GAP2Q9H2M9 1393 aa32.03■■■□□ 2.72
CDCP1-202ENST00000425231 SPATA31E1Q6ZUB1 1445 aa32■■■□□ 2.71
CDCP1-202ENST00000425231 CADPS2Q86UW7 1296 aa32■■■□□ 2.71
CDCP1-202ENST00000425231 SETD1AO15047 1707 aaKnown RBP31.99■■■□□ 2.71
CDCP1-202ENST00000425231 ATF3P18847 181 aa31.97■■■□□ 2.71
CDCP1-202ENST00000425231 RGL3Q3MIN7 710 aa31.96■■■□□ 2.71
CDCP1-202ENST00000425231 DCCP43146 1447 aa31.92■■■□□ 2.7
CDCP1-202ENST00000425231 ADGRF5Q8IZF2 1346 aa31.92■■■□□ 2.7
CDCP1-202ENST00000425231 IFT172Q9UG01 1749 aa31.89■■■□□ 2.7
CDCP1-202ENST00000425231 ANKRD30BQ9BXX2 1392 aa31.88■■■□□ 2.69
CDCP1-202ENST00000425231 PHLPP1O60346 1717 aa31.88■■■□□ 2.69
CDCP1-202ENST00000425231 PTCH1Q13635 1447 aa31.86■■■□□ 2.69
CDCP1-202ENST00000425231 PRAG1Q86YV5 1406 aa31.86■■■□□ 2.69
CDCP1-202ENST00000425231 ADGRL3Q9HAR2 1447 aa31.86■■■□□ 2.69
CDCP1-202ENST00000425231 HRCP23327 699 aa31.85■■■□□ 2.69
CDCP1-202ENST00000425231 ROBO2Q9HCK4 1378 aa31.85■■■□□ 2.69
CDCP1-202ENST00000425231 NALCNQ8IZF0 1738 aa31.83■■■□□ 2.69
CDCP1-202ENST00000425231 SOCS7O14512 581 aa31.83■■■□□ 2.69
CDCP1-202ENST00000425231 BRINP3Q76B58 766 aa31.83■■■□□ 2.69
CDCP1-202ENST00000425231 PHF23Q9BUL5 403 aaPredicted RBP31.83■■■□□ 2.69
CDCP1-202ENST00000425231 MST1RQ04912 1400 aa31.82■■■□□ 2.68
CDCP1-202ENST00000425231 COL16A1Q07092 1604 aaPredicted RBP31.82■■■□□ 2.68
CDCP1-202ENST00000425231 AHDC1Q5TGY3 1603 aaPredicted RBP31.79■■■□□ 2.68
CDCP1-202ENST00000425231 PIK3C2GO75747 1445 aa31.78■■■□□ 2.68
CDCP1-202ENST00000425231 JCADQ9P266 1359 aa31.77■■■□□ 2.68
CDCP1-202ENST00000425231 ASXL1Q8IXJ9 1541 aa31.74■■■□□ 2.67
CDCP1-202ENST00000425231 RGS17Q9UGC6 210 aaPredicted RBP31.74■■■□□ 2.67
CDCP1-202ENST00000425231 NRXN1Q9ULB1 1477 aa31.71■■■□□ 2.67
CDCP1-202ENST00000425231 TMEM132EQ6IEE7 984 aa31.71■■■□□ 2.67
CDCP1-202ENST00000425231 TECPR2O15040 1411 aa31.69■■■□□ 2.66
CDCP1-202ENST00000425231 LRPPRCP42704 1394 aaKnown RBP31.69■■■□□ 2.66
CDCP1-202ENST00000425231 STK26Q9P289 416 aa31.69■■■□□ 2.66
CDCP1-202ENST00000425231 MYOM2P54296 1465 aa31.69■■■□□ 2.66
CDCP1-202ENST00000425231 C14orf93Q9H972 538 aaKnown RBP31.68■■■□□ 2.66
CDCP1-202ENST00000425231 C1orf167Q5SNV9 1468 aa31.68■■■□□ 2.66
CDCP1-202ENST00000425231 ABCC11Q96J66 1382 aa31.68■■■□□ 2.66
CDCP1-202ENST00000425231 NHSL1Q5SYE7 1610 aa31.67■■■□□ 2.66
CDCP1-202ENST00000425231 WAPLQ7Z5K2 1190 aa31.64■■■□□ 2.66
CDCP1-202ENST00000425231 SPATA31A6Q5VVP1 1343 aa31.63■■■□□ 2.65
CDCP1-202ENST00000425231 YTHDC2Q9H6S0 1430 aaKnown RBP31.63■■■□□ 2.65
CDCP1-202ENST00000425231 CFAP70Q5T0N1 1121 aa31.63■■■□□ 2.65
CDCP1-202ENST00000425231 SHPRHQ149N8 1683 aa31.63■■■□□ 2.65
CDCP1-202ENST00000425231 KNDC1Q76NI1 1749 aa31.62■■■□□ 2.65
CDCP1-202ENST00000425231 DDX17Q92841 729 aaKnown RBP31.62■■■□□ 2.65
CDCP1-202ENST00000425231 ORAI2Q96SN7 254 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms