RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 HECW1Q76N89 1606 aa21.7■■□□□ 1.06
BRPF1-203ENST00000424362 CDK11BP21127 795 aaKnown RBP21.7■■□□□ 1.06
BRPF1-203ENST00000424362 TROQ12816 1431 aaPredicted RBP21.69■■□□□ 1.06
BRPF1-203ENST00000424362 SUPT6HQ7KZ85 1726 aaKnown RBP21.69■■□□□ 1.06
BRPF1-203ENST00000424362 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
BRPF1-203ENST00000424362 HDAC5Q9UQL6 1122 aa21.68■■□□□ 1.06
BRPF1-203ENST00000424362 RIPK4P57078 832 aa21.68■■□□□ 1.06
BRPF1-203ENST00000424362 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
BRPF1-203ENST00000424362 KIF16BQ96L93 1317 aa21.67■■□□□ 1.06
BRPF1-203ENST00000424362 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
BRPF1-203ENST00000424362 MRC2Q9UBG0 1479 aa21.66■■□□□ 1.06
BRPF1-203ENST00000424362 C22orf23Q9BZE7 217 aa21.66■■□□□ 1.06
BRPF1-203ENST00000424362 SYNJ2O15056 1496 aa21.66■■□□□ 1.06
BRPF1-203ENST00000424362 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
BRPF1-203ENST00000424362 DAPK1P53355 1430 aa21.65■■□□□ 1.06
BRPF1-203ENST00000424362 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
BRPF1-203ENST00000424362 PHF14O94880 888 aa21.65■■□□□ 1.06
BRPF1-203ENST00000424362 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
BRPF1-203ENST00000424362 CSPP1Q1MSJ5 1256 aa21.64■■□□□ 1.06
BRPF1-203ENST00000424362 PDE3AQ14432 1141 aa21.64■■□□□ 1.05
BRPF1-203ENST00000424362 GPATCH3Q96I76 525 aa21.64■■□□□ 1.05
BRPF1-203ENST00000424362 API5Q9BZZ5 524 aaKnown RBP21.64■■□□□ 1.05
BRPF1-203ENST00000424362 C11orf95C9JLR9 678 aaPredicted RBP21.63■■□□□ 1.05
BRPF1-203ENST00000424362 TCP11L2Q8N4U5 519 aa21.63■■□□□ 1.05
BRPF1-203ENST00000424362 C9orf84Q5VXU9 1444 aa21.63■■□□□ 1.05
BRPF1-203ENST00000424362 HSP90AA2PQ14568 343 aaPredicted RBP21.63■■□□□ 1.05
BRPF1-203ENST00000424362 COG3Q96JB2 828 aa21.63■■□□□ 1.05
BRPF1-203ENST00000424362 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
BRPF1-203ENST00000424362 FOXD4L5Q5VV16 416 aaPredicted RBP21.62■■□□□ 1.05
BRPF1-203ENST00000424362 FOXD4L4Q8WXT5 416 aaPredicted RBP21.62■■□□□ 1.05
BRPF1-203ENST00000424362 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
BRPF1-203ENST00000424362 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
BRPF1-203ENST00000424362 AMPHP49418 695 aa21.62■■□□□ 1.05
BRPF1-203ENST00000424362 MSH5O43196 834 aa21.61■■□□□ 1.05
BRPF1-203ENST00000424362 REC8O95072 547 aa21.61■■□□□ 1.05
BRPF1-203ENST00000424362 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
BRPF1-203ENST00000424362 MTHFSP49914 203 aa21.6■■□□□ 1.05
BRPF1-203ENST00000424362 NGDNQ8NEJ9 315 aaKnown RBP21.6■■□□□ 1.05
BRPF1-203ENST00000424362 ANKRD30BQ9BXX2 1392 aa21.59■■□□□ 1.05
BRPF1-203ENST00000424362 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
BRPF1-203ENST00000424362 ARID3AQ99856 593 aa21.59■■□□□ 1.05
BRPF1-203ENST00000424362 ARHGAP5Q13017 1502 aa21.58■■□□□ 1.05
BRPF1-203ENST00000424362 FRAT2O75474 233 aaPredicted RBP21.58■■□□□ 1.05
BRPF1-203ENST00000424362 RILPL2Q969X0 211 aa21.58■■□□□ 1.05
BRPF1-203ENST00000424362 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.04
BRPF1-203ENST00000424362 CUL7Q14999 1698 aa21.56■■□□□ 1.04
BRPF1-203ENST00000424362 NUTM2FA1L443 756 aa21.55■■□□□ 1.04
BRPF1-203ENST00000424362 BCAR3O75815 825 aa21.55■■□□□ 1.04
BRPF1-203ENST00000424362 GNAI1P63096 354 aa21.55■■□□□ 1.04
BRPF1-203ENST00000424362 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
BRPF1-203ENST00000424362 PDZRN3Q9UPQ7 1066 aa21.54■■□□□ 1.04
BRPF1-203ENST00000424362 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
BRPF1-203ENST00000424362 EID1Q9Y6B2 187 aa21.54■■□□□ 1.04
BRPF1-203ENST00000424362 GNL2Q13823 731 aaKnown RBP21.53■■□□□ 1.04
BRPF1-203ENST00000424362 ATP6V1DQ9Y5K8 247 aa21.53■■□□□ 1.04
BRPF1-203ENST00000424362 NCOA1Q15788 1441 aa21.53■■□□□ 1.04
BRPF1-203ENST00000424362 NUCB2P80303 420 aa21.53■■□□□ 1.04
BRPF1-203ENST00000424362 CDK13Q14004 1512 aaKnown RBP21.52■■□□□ 1.04
BRPF1-203ENST00000424362 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
BRPF1-203ENST00000424362 ERBINQ96RT1 1412 aa21.52■■□□□ 1.04
BRPF1-203ENST00000424362 SNAPC4Q5SXM2 1469 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 MRE11P49959 708 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 BRPF3Q9ULD4 1205 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 SCAPERQ9BY12 1400 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 TMEM132EQ6IEE7 984 aa21.51■■□□□ 1.03
BRPF1-203ENST00000424362 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
BRPF1-203ENST00000424362 INTS3Q68E01 1043 aaKnown RBP21.5■■□□□ 1.03
BRPF1-203ENST00000424362 IQGAP2Q13576 1575 aa21.5■■□□□ 1.03
BRPF1-203ENST00000424362 NINLQ9Y2I6 1382 aa21.48■■□□□ 1.03
BRPF1-203ENST00000424362 FOXD4L6Q3SYB3 417 aaPredicted RBP21.48■■□□□ 1.03
BRPF1-203ENST00000424362 FOXD4L3Q6VB84 417 aaPredicted RBP21.48■■□□□ 1.03
BRPF1-203ENST00000424362 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
BRPF1-203ENST00000424362 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
BRPF1-203ENST00000424362 TRAK2O60296 914 aa21.47■■□□□ 1.03
BRPF1-203ENST00000424362 CABP2Q9NPB3 220 aa21.47■■□□□ 1.03
BRPF1-203ENST00000424362 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
BRPF1-203ENST00000424362 PTPN23Q9H3S7 1636 aa21.47■■□□□ 1.03
BRPF1-203ENST00000424362 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
BRPF1-203ENST00000424362 CDC45O75419 566 aa21.46■■□□□ 1.03
BRPF1-203ENST00000424362 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
BRPF1-203ENST00000424362 HMOX1P09601 288 aa21.46■■□□□ 1.03
BRPF1-203ENST00000424362 KIF3AQ9Y496 699 aa21.45■■□□□ 1.02
BRPF1-203ENST00000424362 TPM4P67936 248 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 FAM43AQ8N2R8 423 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 CSB-PGBD3P0DP91 1061 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 SLC12A5Q9H2X9 1139 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
BRPF1-203ENST00000424362 ANO2Q9NQ90 1003 aa21.44■■□□□ 1.02
BRPF1-203ENST00000424362 WDR63Q8IWG1 891 aa21.43■■□□□ 1.02
BRPF1-203ENST00000424362 GORABQ5T7V8 394 aa21.43■■□□□ 1.02
BRPF1-203ENST00000424362 ABCC5O15440 1437 aa21.43■■□□□ 1.02
BRPF1-203ENST00000424362 SLFN5Q08AF3 891 aa21.43■■□□□ 1.02
BRPF1-203ENST00000424362 RPRD2Q5VT52 1461 aaKnown RBP21.42■■□□□ 1.02
BRPF1-203ENST00000424362 DIAPH3Q9NSV4 1193 aa21.42■■□□□ 1.02
BRPF1-203ENST00000424362 CHMP3Q9Y3E7 222 aa21.42■■□□□ 1.02
BRPF1-203ENST00000424362 MCTP1Q6DN14 999 aa21.41■■□□□ 1.02
BRPF1-203ENST00000424362 RUFY2Q8WXA3 655 aa21.41■■□□□ 1.02
BRPF1-203ENST00000424362 CT47B1P0C2W7 299 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms