RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 TRIM52Q96A61 297 aa11.5□□□□□ -0.57
SSB-205ENST00000422006 PDCL3Q9H2J4 239 aa11.5□□□□□ -0.57
SSB-205ENST00000422006 C3P01024 1663 aa11.49□□□□□ -0.57
SSB-205ENST00000422006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.572e-20■□□□□ 9
SSB-205ENST00000422006 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
SSB-205ENST00000422006 MLH3Q9UHC1 1453 aa11.48□□□□□ -0.57
SSB-205ENST00000422006 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
SSB-205ENST00000422006 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
SSB-205ENST00000422006 TOM1O60784 492 aa11.48□□□□□ -0.57
SSB-205ENST00000422006 FTSJ3Q8IY81 847 aaKnown RBP11.48□□□□□ -0.57
SSB-205ENST00000422006 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
SSB-205ENST00000422006 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
SSB-205ENST00000422006 PNNQ9H307 717 aaKnown RBP11.47□□□□□ -0.57
SSB-205ENST00000422006 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
SSB-205ENST00000422006 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
SSB-205ENST00000422006 CIZ1Q9ULV3 898 aaPredicted RBP11.46□□□□□ -0.58
SSB-205ENST00000422006 SCAPERQ9BY12 1400 aa11.45□□□□□ -0.58
SSB-205ENST00000422006 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
SSB-205ENST00000422006 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
SSB-205ENST00000422006 CAPN15O75808 1086 aa11.45□□□□□ -0.58
SSB-205ENST00000422006 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
SSB-205ENST00000422006 CCDC9Q9Y3X0 531 aaKnown RBP11.45□□□□□ -0.58
SSB-205ENST00000422006 IGSF3O75054 1194 aa11.44□□□□□ -0.58
SSB-205ENST00000422006 EFCAB2Q5VUJ9 269 aa11.44□□□□□ -0.58
SSB-205ENST00000422006 KCNV2Q8TDN2 545 aa11.44□□□□□ -0.58
SSB-205ENST00000422006 SECISBP2LQ93073 1101 aaKnown RBP11.43□□□□□ -0.58
SSB-205ENST00000422006 DIP2CQ9Y2E4 1556 aa11.43□□□□□ -0.58
SSB-205ENST00000422006 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
SSB-205ENST00000422006 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
SSB-205ENST00000422006 MYO5CQ9NQX4 1742 aa11.42□□□□□ -0.58
SSB-205ENST00000422006 CLCN1P35523 988 aa11.42□□□□□ -0.58
SSB-205ENST00000422006 CCER2I3L3R5 266 aa11.4□□□□□ -0.58
SSB-205ENST00000422006 NCLP19338 710 aaKnown RBP11.4□□□□□ -0.58
SSB-205ENST00000422006 ZNF830Q96NB3 372 aaPredicted RBP11.4□□□□□ -0.58
SSB-205ENST00000422006 BCCIPQ9P287 314 aaKnown RBP eCLIP11.4□□□□□ -0.58
SSB-205ENST00000422006 EEA1Q15075 1411 aa11.4□□□□□ -0.58
SSB-205ENST00000422006 NFKBIBQ15653 356 aa11.4□□□□□ -0.59
SSB-205ENST00000422006 SYNMO15061 1565 aa11.39□□□□□ -0.59
SSB-205ENST00000422006 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
SSB-205ENST00000422006 ABCB7O75027 752 aa11.38□□□□□ -0.59
SSB-205ENST00000422006 SMAP1Q8IYB5 467 aaPredicted RBP11.37□□□□□ -0.59
SSB-205ENST00000422006 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
SSB-205ENST00000422006 CEP170BQ9Y4F5 1589 aaPredicted RBP11.37□□□□□ -0.59
SSB-205ENST00000422006 MYO3AQ8NEV4 1616 aa11.37□□□□□ -0.59
SSB-205ENST00000422006 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
SSB-205ENST00000422006 A2ML1A8K2U0 1454 aa11.36□□□□□ -0.59
SSB-205ENST00000422006 TPM2P07951 284 aa11.35□□□□□ -0.59
SSB-205ENST00000422006 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
SSB-205ENST00000422006 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
SSB-205ENST00000422006 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
SSB-205ENST00000422006 RNF17Q9BXT8 1623 aaKnown RBP11.34□□□□□ -0.59
SSB-205ENST00000422006 HSPA1LP34931 641 aa11.34□□□□□ -0.59
SSB-205ENST00000422006 MLECQ14165 292 aa11.34□□□□□ -0.59
SSB-205ENST00000422006 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
SSB-205ENST00000422006 KIF14Q15058 1648 aa11.33□□□□□ -0.6
SSB-205ENST00000422006 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
SSB-205ENST00000422006 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
SSB-205ENST00000422006 CLIP1P30622 1438 aa11.33□□□□□ -0.6
SSB-205ENST00000422006 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
SSB-205ENST00000422006 SUPT6HQ7KZ85 1726 aaKnown RBP11.32□□□□□ -0.6
SSB-205ENST00000422006 MED14O60244 1454 aa11.32□□□□□ -0.6
SSB-205ENST00000422006 APBB1O00213 710 aa11.31□□□□□ -0.6
SSB-205ENST00000422006 UTP14CQ5TAP6 766 aaKnown RBP11.31□□□□□ -0.6
SSB-205ENST00000422006 CEBPAP49715 358 aaPredicted RBP11.3□□□□□ -0.6
SSB-205ENST00000422006 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
SSB-205ENST00000422006 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
SSB-205ENST00000422006 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
SSB-205ENST00000422006 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
SSB-205ENST00000422006 ABCC1P33527 1531 aa11.28□□□□□ -0.6
SSB-205ENST00000422006 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
SSB-205ENST00000422006 PLEKHH2Q8IVE3 1493 aa11.28□□□□□ -0.6
SSB-205ENST00000422006 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
SSB-205ENST00000422006 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
SSB-205ENST00000422006 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.6
SSB-205ENST00000422006 HSP90B1P14625 803 aaKnown RBP11.27□□□□□ -0.61
SSB-205ENST00000422006 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
SSB-205ENST00000422006 ARHGAP5Q13017 1502 aa11.27□□□□□ -0.61
SSB-205ENST00000422006 TROQ12816 1431 aaPredicted RBP11.27□□□□□ -0.61
SSB-205ENST00000422006 L1TD1Q5T7N2 865 aaKnown RBP11.26□□□□□ -0.61
SSB-205ENST00000422006 RGS22Q8NE09 1264 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 LRRC9Q6ZRR7 1453 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 DMTNQ08495 405 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 CNPY4Q8N129 248 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 MAP7D2Q96T17 732 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 PLXNC1O60486 1568 aa11.26□□□□□ -0.61
SSB-205ENST00000422006 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
SSB-205ENST00000422006 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
SSB-205ENST00000422006 CADPS2Q86UW7 1296 aa11.25□□□□□ -0.61
SSB-205ENST00000422006 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
SSB-205ENST00000422006 DNMT1P26358 1616 aaKnown RBP11.25□□□□□ -0.61
SSB-205ENST00000422006 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
SSB-205ENST00000422006 NCKAP5LQ9HCH0 1330 aa11.25□□□□□ -0.61
SSB-205ENST00000422006 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
SSB-205ENST00000422006 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
SSB-205ENST00000422006 KCNG1Q9UIX4 513 aa11.24□□□□□ -0.61
SSB-205ENST00000422006 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
SSB-205ENST00000422006 KDM5DQ9BY66 1539 aa11.24□□□□□ -0.61
SSB-205ENST00000422006 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms