RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 KDM5AP29375 1690 aaKnown RBP14.41□□□□□ -0.1
NUP50-205ENST00000419387 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
NUP50-205ENST00000419387 STRCP1A6NGW2 1772 aa14.4□□□□□ -0.1
NUP50-205ENST00000419387 HSPA1LP34931 641 aa14.39□□□□□ -0.11
NUP50-205ENST00000419387 TET3O43151 1660 aa14.39□□□□□ -0.11
NUP50-205ENST00000419387 UNC13BO14795 1591 aa14.39□□□□□ -0.11
NUP50-205ENST00000419387 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
NUP50-205ENST00000419387 NUP155O75694 1391 aa14.37□□□□□ -0.11
NUP50-205ENST00000419387 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
NUP50-205ENST00000419387 SLC26A8Q96RN1 970 aa14.37□□□□□ -0.11
NUP50-205ENST00000419387 KCNA6P17658 529 aa14.36□□□□□ -0.11
NUP50-205ENST00000419387 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
NUP50-205ENST00000419387 CHGAP10645 457 aaKnown RBP14.35□□□□□ -0.11
NUP50-205ENST00000419387 ILDR2Q71H61 639 aa14.35□□□□□ -0.11
NUP50-205ENST00000419387 BCANQ96GW7 911 aa14.35□□□□□ -0.11
NUP50-205ENST00000419387 ALKQ9UM73 1620 aa14.34□□□□□ -0.11
NUP50-205ENST00000419387 IQGAP3Q86VI3 1631 aa14.33□□□□□ -0.11
NUP50-205ENST00000419387 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
NUP50-205ENST00000419387 E9PCH4 1651 aa14.33□□□□□ -0.12
NUP50-205ENST00000419387 ZFYVE9O95405 1425 aa14.32□□□□□ -0.12
NUP50-205ENST00000419387 RIMS2Q9UQ26 1411 aa14.32□□□□□ -0.12
NUP50-205ENST00000419387 PPP1R15AO75807 674 aaPredicted RBP14.32□□□□□ -0.12
NUP50-205ENST00000419387 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
NUP50-205ENST00000419387 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.32□□□□□ -0.12
NUP50-205ENST00000419387 PLEKHG1Q9ULL1 1385 aa14.32□□□□□ -0.12
NUP50-205ENST00000419387 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
NUP50-205ENST00000419387 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
NUP50-205ENST00000419387 TBX22Q9Y458 520 aa14.29□□□□□ -0.12
NUP50-205ENST00000419387 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
NUP50-205ENST00000419387 NUTM2DQ5VT03 806 aaPredicted RBP14.28□□□□□ -0.12
NUP50-205ENST00000419387 XIRP1Q702N8 1843 aaKnown RBP14.28□□□□□ -0.12
NUP50-205ENST00000419387 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
NUP50-205ENST00000419387 NAIPQ13075 1403 aa14.26□□□□□ -0.13
NUP50-205ENST00000419387 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
NUP50-205ENST00000419387 SOCS7O14512 581 aa14.25□□□□□ -0.13
NUP50-205ENST00000419387 NWD1Q149M9 1564 aa14.25□□□□□ -0.13
NUP50-205ENST00000419387 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
NUP50-205ENST00000419387 ADAMTS13Q76LX8 1427 aa14.23□□□□□ -0.13
NUP50-205ENST00000419387 CHD2O14647 1828 aaKnown RBP14.22□□□□□ -0.13
NUP50-205ENST00000419387 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
NUP50-205ENST00000419387 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
NUP50-205ENST00000419387 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
NUP50-205ENST00000419387 MSH6P52701 1360 aa14.22□□□□□ -0.13
NUP50-205ENST00000419387 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
NUP50-205ENST00000419387 HFM1A2PYH4 1435 aa14.21□□□□□ -0.13
NUP50-205ENST00000419387 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.14
NUP50-205ENST00000419387 SLAIN2Q9P270 581 aa14.2□□□□□ -0.14
NUP50-205ENST00000419387 NCOA3Q9Y6Q9 1424 aa14.2□□□□□ -0.14
NUP50-205ENST00000419387 DIP2AQ14689 1571 aa14.19□□□□□ -0.14
NUP50-205ENST00000419387 AMOTL2Q9Y2J4 779 aa14.19□□□□□ -0.14
NUP50-205ENST00000419387 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
NUP50-205ENST00000419387 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
NUP50-205ENST00000419387 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
NUP50-205ENST00000419387 TRPM2O94759 1503 aa14.16□□□□□ -0.14
NUP50-205ENST00000419387 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
NUP50-205ENST00000419387 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
NUP50-205ENST00000419387 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
NUP50-205ENST00000419387 ROBO1Q9Y6N7 1651 aa14.15□□□□□ -0.14
NUP50-205ENST00000419387 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
NUP50-205ENST00000419387 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
NUP50-205ENST00000419387 ATF3P18847 181 aa14.13□□□□□ -0.15
NUP50-205ENST00000419387 METP08581 1390 aa14.12□□□□□ -0.15
NUP50-205ENST00000419387 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
NUP50-205ENST00000419387 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
NUP50-205ENST00000419387 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
NUP50-205ENST00000419387 KIF1BO60333 1816 aa14.11□□□□□ -0.15
NUP50-205ENST00000419387 RPGRIP1LQ68CZ1 1315 aa14.11□□□□□ -0.15
NUP50-205ENST00000419387 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.09□□□□□ -0.15
NUP50-205ENST00000419387 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
NUP50-205ENST00000419387 RGS17Q9UGC6 210 aaPredicted RBP14.08□□□□□ -0.16
NUP50-205ENST00000419387 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
NUP50-205ENST00000419387 JCADQ9P266 1359 aa14.07□□□□□ -0.16
NUP50-205ENST00000419387 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
NUP50-205ENST00000419387 DCCP43146 1447 aa14.07□□□□□ -0.16
NUP50-205ENST00000419387 ACIN1Q9UKV3 1341 aaKnown RBP14.06□□□□□ -0.16
NUP50-205ENST00000419387 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
NUP50-205ENST00000419387 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
NUP50-205ENST00000419387 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
NUP50-205ENST00000419387 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.16
NUP50-205ENST00000419387 MST1RQ04912 1400 aa14.02□□□□□ -0.16
NUP50-205ENST00000419387 SETD5Q9C0A6 1442 aa14.02□□□□□ -0.16
NUP50-205ENST00000419387 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
NUP50-205ENST00000419387 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
NUP50-205ENST00000419387 SPATA31A6Q5VVP1 1343 aa14.01□□□□□ -0.17
NUP50-205ENST00000419387 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
NUP50-205ENST00000419387 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
NUP50-205ENST00000419387 POTEAQ6S8J7 498 aa14□□□□□ -0.17
NUP50-205ENST00000419387 PPLO60437 1756 aa14□□□□□ -0.17
NUP50-205ENST00000419387 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
NUP50-205ENST00000419387 SPATA31E1Q6ZUB1 1445 aa13.99□□□□□ -0.17
NUP50-205ENST00000419387 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
NUP50-205ENST00000419387 ANKRD30BQ9BXX2 1392 aa13.98□□□□□ -0.17
NUP50-205ENST00000419387 ASXL1Q8IXJ9 1541 aa13.98□□□□□ -0.17
NUP50-205ENST00000419387 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
NUP50-205ENST00000419387 LRRC59Q96AG4 307 aaKnown RBP13.97□□□□□ -0.17
NUP50-205ENST00000419387 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
NUP50-205ENST00000419387 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.17
NUP50-205ENST00000419387 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.18
NUP50-205ENST00000419387 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
NUP50-205ENST00000419387 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms