RNA–Protein interactions for RNA: ENST00000419210.1

COPS6-203, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-203ENST00000419210 IDI1Q13907 227 aa28.62■■■□□ 2.17
COPS6-203ENST00000419210 CHD2O14647 1828 aaKnown RBP28.6■■■□□ 2.17
COPS6-203ENST00000419210 RXRBP28702 533 aa28.57■■■□□ 2.16
COPS6-203ENST00000419210 AHDC1Q5TGY3 1603 aaPredicted RBP28.56■■■□□ 2.16
COPS6-203ENST00000419210 LMTK2Q8IWU2 1503 aa28.56■■■□□ 2.16
COPS6-203ENST00000419210 RRP7BPQ9NSQ0 103 aa28.56■■■□□ 2.16
COPS6-203ENST00000419210 CDK12Q9NYV4 1490 aaPredicted RBP28.54■■■□□ 2.16
COPS6-203ENST00000419210 C14orf37Q86TY3 774 aa28.54■■■□□ 2.16
COPS6-203ENST00000419210 NOS1P29475 1434 aa28.5■■■□□ 2.15
COPS6-203ENST00000419210 MYO5BQ9ULV0 1848 aa28.5■■■□□ 2.15
COPS6-203ENST00000419210 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.49■■■□□ 2.15
COPS6-203ENST00000419210 NCOA3Q9Y6Q9 1424 aa28.49■■■□□ 2.15
COPS6-203ENST00000419210 PLEKHG1Q9ULL1 1385 aa28.49■■■□□ 2.15
COPS6-203ENST00000419210 PPP1R15AO75807 674 aaPredicted RBP28.48■■■□□ 2.15
COPS6-203ENST00000419210 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
COPS6-203ENST00000419210 ABCC5O15440 1437 aa28.46■■■□□ 2.15
COPS6-203ENST00000419210 NUTM2BA6NNL0 878 aaPredicted RBP28.45■■■□□ 2.14
COPS6-203ENST00000419210 NUTM2EB1AL46 878 aaPredicted RBP28.45■■■□□ 2.14
COPS6-203ENST00000419210 CADPS2Q86UW7 1296 aa28.45■■■□□ 2.14
COPS6-203ENST00000419210 NUTM2AQ8IVF1 878 aaPredicted RBP28.45■■■□□ 2.14
COPS6-203ENST00000419210 SLC52A1Q9NWF4 448 aa28.45■■■□□ 2.14
COPS6-203ENST00000419210 ZFYVE9O95405 1425 aa28.44■■■□□ 2.14
COPS6-203ENST00000419210 DIP2AQ14689 1571 aa28.44■■■□□ 2.14
COPS6-203ENST00000419210 PTPN23Q9H3S7 1636 aa28.43■■■□□ 2.14
COPS6-203ENST00000419210 ATF3P18847 181 aa28.43■■■□□ 2.14
COPS6-203ENST00000419210 DAPK1P53355 1430 aa28.42■■■□□ 2.14
COPS6-203ENST00000419210 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
COPS6-203ENST00000419210 RIMS2Q9UQ26 1411 aa28.42■■■□□ 2.14
COPS6-203ENST00000419210 AFF2P51816 1311 aa28.42■■■□□ 2.14
COPS6-203ENST00000419210 HDGFP51858 240 aaKnown RBP28.4■■■□□ 2.14
COPS6-203ENST00000419210 KANK4Q5T7N3 995 aaPredicted RBP28.39■■■□□ 2.14
COPS6-203ENST00000419210 RGS12O14924 1447 aa28.38■■■□□ 2.13
COPS6-203ENST00000419210 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
COPS6-203ENST00000419210 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
COPS6-203ENST00000419210 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
COPS6-203ENST00000419210 RPRD2Q5VT52 1461 aaKnown RBP28.36■■■□□ 2.13
COPS6-203ENST00000419210 TBX22Q9Y458 520 aa28.36■■■□□ 2.13
COPS6-203ENST00000419210 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
COPS6-203ENST00000419210 NUTM2DQ5VT03 806 aaPredicted RBP28.32■■■□□ 2.12
COPS6-203ENST00000419210 ASXL1Q8IXJ9 1541 aa28.32■■■□□ 2.12
COPS6-203ENST00000419210 NHSL1Q5SYE7 1610 aa28.31■■■□□ 2.12
COPS6-203ENST00000419210 CHIC2Q9UKJ5 165 aa28.3■■■□□ 2.12
COPS6-203ENST00000419210 PIK3R4Q99570 1358 aa28.29■■■□□ 2.12
COPS6-203ENST00000419210 RBM6P78332 1123 aaKnown RBP28.29■■■□□ 2.12
COPS6-203ENST00000419210 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.29■■■□□ 2.12
COPS6-203ENST00000419210 C8orf37Q96NL8 207 aa28.29■■■□□ 2.12
COPS6-203ENST00000419210 TRPM2O94759 1503 aa28.28■■■□□ 2.12
COPS6-203ENST00000419210 ADAMTS13Q76LX8 1427 aa28.28■■■□□ 2.12
COPS6-203ENST00000419210 SETD5Q9C0A6 1442 aa28.28■■■□□ 2.12
COPS6-203ENST00000419210 CHGAP10645 457 aaKnown RBP28.26■■■□□ 2.11
COPS6-203ENST00000419210 QTRT2Q9H974 415 aaKnown RBP28.26■■■□□ 2.11
COPS6-203ENST00000419210 DCCP43146 1447 aa28.26■■■□□ 2.11
COPS6-203ENST00000419210 SRCAPQ6ZRS2 3230 aa28.26■■■□□ 2.11
COPS6-203ENST00000419210 ATAD2Q6PL18 1390 aa28.24■■■□□ 2.11
COPS6-203ENST00000419210 FOXD1Q16676 465 aa28.23■■■□□ 2.11
COPS6-203ENST00000419210 LRRC59Q96AG4 307 aaKnown RBP28.21■■■□□ 2.11
COPS6-203ENST00000419210 AMOTL2Q9Y2J4 779 aa28.2■■■□□ 2.1
COPS6-203ENST00000419210 NGLY1Q96IV0 654 aa28.19■■■□□ 2.1
COPS6-203ENST00000419210 MST1RQ04912 1400 aa28.18■■■□□ 2.1
COPS6-203ENST00000419210 ZRANB1Q9UGI0 708 aa28.18■■■□□ 2.1
COPS6-203ENST00000419210 UNC13BO14795 1591 aa28.16■■■□□ 2.1
COPS6-203ENST00000419210 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
COPS6-203ENST00000419210 PNPLA6Q8IY17 1366 aa28.16■■■□□ 2.1
COPS6-203ENST00000419210 XRN1Q8IZH2 1706 aaKnown RBP28.16■■■□□ 2.1
COPS6-203ENST00000419210 PTPRUQ92729 1446 aa28.16■■■□□ 2.1
COPS6-203ENST00000419210 ANKRD50Q9ULJ7 1429 aa28.13■■■□□ 2.09
COPS6-203ENST00000419210 E9PCH4 1651 aa28.12■■■□□ 2.09
COPS6-203ENST00000419210 SETBP1Q9Y6X0 1596 aa28.11■■■□□ 2.09
COPS6-203ENST00000419210 ADAMTS2O95450 1211 aa28.11■■■□□ 2.09
COPS6-203ENST00000419210 DDX17Q92841 729 aaKnown RBP28.09■■■□□ 2.09
COPS6-203ENST00000419210 APLP2Q06481 763 aa28.07■■■□□ 2.08
COPS6-203ENST00000419210 NRXN3Q9Y4C0 1643 aa28.07■■■□□ 2.08
COPS6-203ENST00000419210 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
COPS6-203ENST00000419210 USP21Q9UK80 565 aa28.05■■■□□ 2.08
COPS6-203ENST00000419210 ADGRL3Q9HAR2 1447 aa28.04■■■□□ 2.08
COPS6-203ENST00000419210 TRPC5Q9UL62 973 aaPredicted RBP28.03■■■□□ 2.08
COPS6-203ENST00000419210 IQGAP3Q86VI3 1631 aa28■■■□□ 2.07
COPS6-203ENST00000419210 LAMC1P11047 1609 aa27.99■■■□□ 2.07
COPS6-203ENST00000419210 PTCH1Q13635 1447 aa27.97■■■□□ 2.07
COPS6-203ENST00000419210 ATRNO75882 1429 aa27.96■■■□□ 2.07
COPS6-203ENST00000419210 CCDC125Q86Z20 511 aa27.96■■■□□ 2.07
COPS6-203ENST00000419210 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.06
COPS6-203ENST00000419210 EP400Q96L91 3159 aa27.95■■■□□ 2.06
COPS6-203ENST00000419210 METP08581 1390 aa27.94■■■□□ 2.06
COPS6-203ENST00000419210 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
COPS6-203ENST00000419210 FNBP4Q8N3X1 1017 aaPredicted RBP27.92■■■□□ 2.06
COPS6-203ENST00000419210 COL22A1Q8NFW1 1626 aaPredicted RBP27.92■■■□□ 2.06
COPS6-203ENST00000419210 ZNF326Q5BKZ1 582 aaKnown RBP27.88■■■□□ 2.05
COPS6-203ENST00000419210 MARF1Q9Y4F3 1742 aaKnown RBP27.88■■■□□ 2.05
COPS6-203ENST00000419210 SOS2Q07890 1332 aaPredicted RBP27.88■■■□□ 2.05
COPS6-203ENST00000419210 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
COPS6-203ENST00000419210 SPHKAPQ2M3C7 1700 aa27.87■■■□□ 2.05
COPS6-203ENST00000419210 LRP5O75197 1615 aa27.83■■■□□ 2.05
COPS6-203ENST00000419210 ORAI2Q96SN7 254 aa27.82■■■□□ 2.04
COPS6-203ENST00000419210 BLMP54132 1417 aaPredicted RBP27.81■■■□□ 2.04
COPS6-203ENST00000419210 BCL9LQ86UU0 1499 aa27.81■■■□□ 2.04
COPS6-203ENST00000419210 NUP155O75694 1391 aa27.8■■■□□ 2.04
COPS6-203ENST00000419210 MYOM2P54296 1465 aa27.8■■■□□ 2.04
COPS6-203ENST00000419210 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.79■■■□□ 2.04
COPS6-203ENST00000419210 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms