RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 CPLX1O14810 134 aa21.71■■□□□ 1.07
UBR3-203ENST00000418381 DIAPH3Q9NSV4 1193 aa21.71■■□□□ 1.07
UBR3-203ENST00000418381 ANO2Q9NQ90 1003 aa21.7■■□□□ 1.06
UBR3-203ENST00000418381 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
UBR3-203ENST00000418381 IPO7O95373 1038 aaKnown RBP21.7■■□□□ 1.06
UBR3-203ENST00000418381 BCL11BQ9C0K0 894 aaPredicted RBP21.7■■□□□ 1.06
UBR3-203ENST00000418381 NUTM2GQ5VZR2 741 aa21.7■■□□□ 1.06
UBR3-203ENST00000418381 ANKRD45Q5TZF3 282 aa21.69■■□□□ 1.06
UBR3-203ENST00000418381 SPDYE4A6NLX3 237 aa21.69■■□□□ 1.06
UBR3-203ENST00000418381 CARMIL2Q6F5E8 1435 aa21.69■■□□□ 1.06
UBR3-203ENST00000418381 CPLX2Q6PUV4 134 aaKnown RBP21.69■■□□□ 1.06
UBR3-203ENST00000418381 AIMP1Q12904 312 aaKnown RBP21.69■■□□□ 1.06
UBR3-203ENST00000418381 ANKRD20A12PQ8NF67 263 aa21.68■■□□□ 1.06
UBR3-203ENST00000418381 MYCNP04198 464 aaPredicted RBP21.68■■□□□ 1.06
UBR3-203ENST00000418381 SKIDA1Q1XH10 827 aa21.67■■□□□ 1.06
UBR3-203ENST00000418381 NUP155O75694 1391 aa21.67■■□□□ 1.06
UBR3-203ENST00000418381 RBM5P52756 815 aaKnown RBP eCLIP21.67■■□□□ 1.06
UBR3-203ENST00000418381 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
UBR3-203ENST00000418381 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
UBR3-203ENST00000418381 BCL2L13Q9BXK5 485 aa21.66■■□□□ 1.06
UBR3-203ENST00000418381 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
UBR3-203ENST00000418381 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
UBR3-203ENST00000418381 CHMP4BP1P59074 171 aa21.65■■□□□ 1.06
UBR3-203ENST00000418381 PRDM2Q13029 1718 aa21.65■■□□□ 1.06
UBR3-203ENST00000418381 STRN4Q9NRL3 753 aa21.64■■□□□ 1.05
UBR3-203ENST00000418381 NEUROD6Q96NK8 337 aa21.63■■□□□ 1.05
UBR3-203ENST00000418381 STK11IPQ8N1F8 1099 aa21.62■■□□□ 1.05
UBR3-203ENST00000418381 MINK1Q8N4C8 1332 aaPredicted RBP21.62■■□□□ 1.05
UBR3-203ENST00000418381 HOOK1Q9UJC3 728 aaKnown RBP21.62■■□□□ 1.05
UBR3-203ENST00000418381 CENPJQ9HC77 1338 aaPredicted RBP21.61■■□□□ 1.05
UBR3-203ENST00000418381 GOLGA6L3A6NEY3 463 aa21.61■■□□□ 1.05
UBR3-203ENST00000418381 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
UBR3-203ENST00000418381 WASHC4Q2M389 1173 aa21.6■■□□□ 1.05
UBR3-203ENST00000418381 DDX58O95786 925 aaKnown RBP21.59■■□□□ 1.05
UBR3-203ENST00000418381 RIC3Q7Z5B4 369 aa21.59■■□□□ 1.05
UBR3-203ENST00000418381 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
UBR3-203ENST00000418381 WASHC2AQ641Q2 1341 aa21.59■■□□□ 1.05
UBR3-203ENST00000418381 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
UBR3-203ENST00000418381 AK7Q96M32 723 aa21.58■■□□□ 1.05
UBR3-203ENST00000418381 DEKP35659 375 aaKnown RBP21.58■■□□□ 1.04
UBR3-203ENST00000418381 TTLL5Q6EMB2 1281 aa21.57■■□□□ 1.04
UBR3-203ENST00000418381 G3BP1Q13283 466 aaKnown RBP eCLIP21.57■■□□□ 1.04
UBR3-203ENST00000418381 CUX2O14529 1486 aa21.57■■□□□ 1.04
UBR3-203ENST00000418381 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
UBR3-203ENST00000418381 OFD1O75665 1012 aa21.56■■□□□ 1.04
UBR3-203ENST00000418381 RUFY1Q96T51 708 aa21.56■■□□□ 1.04
UBR3-203ENST00000418381 RBM42Q9BTD8 480 aaKnown RBP21.56■■□□□ 1.04
UBR3-203ENST00000418381 MATR3P43243 847 aaKnown RBP eCLIP21.56■■□□□ 1.042e-6■■■□□ 16.9
UBR3-203ENST00000418381 HOMER1Q86YM7 354 aa21.56■■□□□ 1.04
UBR3-203ENST00000418381 RAPGEF4Q8WZA2 1011 aa21.55■■□□□ 1.04
UBR3-203ENST00000418381 CALRP27797 417 aaKnown RBP21.54■■□□□ 1.04
UBR3-203ENST00000418381 NLRP2Q9NX02 1062 aa21.54■■□□□ 1.04
UBR3-203ENST00000418381 MPHOSPH10O00566 681 aaKnown RBP21.54■■□□□ 1.04
UBR3-203ENST00000418381 BICD2Q8TD16 824 aa21.54■■□□□ 1.04
UBR3-203ENST00000418381 GPS2Q13227 327 aa21.54■■□□□ 1.04
UBR3-203ENST00000418381 KIF6Q6ZMV9 814 aa21.54■■□□□ 1.04
UBR3-203ENST00000418381 TMEM87AQ8NBN3 555 aa21.53■■□□□ 1.04
UBR3-203ENST00000418381 SAFBQ15424 915 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBR3-203ENST00000418381 BRMS1Q9HCU9 246 aa21.53■■□□□ 1.04
UBR3-203ENST00000418381 RUFY2Q8WXA3 655 aa21.52■■□□□ 1.04
UBR3-203ENST00000418381 CHMP4CQ96CF2 233 aa21.52■■□□□ 1.04
UBR3-203ENST00000418381 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.03
UBR3-203ENST00000418381 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
UBR3-203ENST00000418381 EEA1Q15075 1411 aa21.51■■□□□ 1.03
UBR3-203ENST00000418381 SYCP1Q15431 976 aa21.5■■□□□ 1.03
UBR3-203ENST00000418381 ZKSCAN1P17029 563 aaPredicted RBP21.5■■□□□ 1.03
UBR3-203ENST00000418381 RALYLQ86SE5 291 aaKnown RBP21.49■■□□□ 1.03
UBR3-203ENST00000418381 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
UBR3-203ENST00000418381 ANKRD62A6NC57 917 aa21.49■■□□□ 1.03
UBR3-203ENST00000418381 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
UBR3-203ENST00000418381 KRT18P05783 430 aaKnown RBP21.48■■□□□ 1.03
UBR3-203ENST00000418381 RDXP35241 583 aaKnown RBP21.48■■□□□ 1.03
UBR3-203ENST00000418381 NEFHP12036 1026 aa21.48■■□□□ 1.03
UBR3-203ENST00000418381 RALBP1Q15311 655 aa21.48■■□□□ 1.03
UBR3-203ENST00000418381 ATP6V1DQ9Y5K8 247 aa21.47■■□□□ 1.03
UBR3-203ENST00000418381 PDILTQ8N807 584 aa21.47■■□□□ 1.03
UBR3-203ENST00000418381 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
UBR3-203ENST00000418381 ZHX3Q9H4I2 956 aa21.46■■□□□ 1.03
UBR3-203ENST00000418381 NEBLO76041 1014 aa21.46■■□□□ 1.03
UBR3-203ENST00000418381 CAGE1Q8TC20 777 aa21.45■■□□□ 1.02
UBR3-203ENST00000418381 ANKRD30AQ9BXX3 1397 aa21.45■■□□□ 1.02
UBR3-203ENST00000418381 ZSCAN29Q8IWY8 852 aaPredicted RBP21.45■■□□□ 1.02
UBR3-203ENST00000418381 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
UBR3-203ENST00000418381 CCDC173Q0VFZ6 552 aa21.44■■□□□ 1.02
UBR3-203ENST00000418381 TTLL12Q14166 644 aaPredicted RBP21.44■■□□□ 1.02
UBR3-203ENST00000418381 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
UBR3-203ENST00000418381 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
UBR3-203ENST00000418381 RNF20Q5VTR2 975 aa21.43■■□□□ 1.02
UBR3-203ENST00000418381 MAP7D2Q96T17 732 aa21.43■■□□□ 1.02
UBR3-203ENST00000418381 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
UBR3-203ENST00000418381 ATP2B1P20020 1258 aa21.42■■□□□ 1.02
UBR3-203ENST00000418381 XBP1P17861 261 aa21.42■■□□□ 1.02
UBR3-203ENST00000418381 DDX49Q9Y6V7 483 aaKnown RBP21.42■■□□□ 1.02
UBR3-203ENST00000418381 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
UBR3-203ENST00000418381 CA8P35219 290 aa21.41■■□□□ 1.02
UBR3-203ENST00000418381 HMOX1P09601 288 aa21.41■■□□□ 1.02
UBR3-203ENST00000418381 PDCL3Q9H2J4 239 aa21.41■■□□□ 1.02
UBR3-203ENST00000418381 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
UBR3-203ENST00000418381 ZNF771Q7L3S4 317 aaPredicted RBP21.4■■□□□ 1.02
UBR3-203ENST00000418381 GRM1Q13255 1194 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms