RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 LMTK2Q8IWU2 1503 aa22.12■■□□□ 1.13
TTC38-202ENST00000417709 NOS1P29475 1434 aa22.12■■□□□ 1.13
TTC38-202ENST00000417709 CHGAP10645 457 aaKnown RBP22.11■■□□□ 1.13
TTC38-202ENST00000417709 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
TTC38-202ENST00000417709 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
TTC38-202ENST00000417709 NUTM2DQ5VT03 806 aaPredicted RBP22.1■■□□□ 1.13
TTC38-202ENST00000417709 ADGRB3O60242 1522 aa22.07■■□□□ 1.12
TTC38-202ENST00000417709 PHLPP1O60346 1717 aa22.07■■□□□ 1.12
TTC38-202ENST00000417709 JCADQ9P266 1359 aa22.07■■□□□ 1.12
TTC38-202ENST00000417709 MYO5BQ9ULV0 1848 aa22.06■■□□□ 1.12
TTC38-202ENST00000417709 TBX22Q9Y458 520 aa22.06■■□□□ 1.12
TTC38-202ENST00000417709 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
TTC38-202ENST00000417709 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
TTC38-202ENST00000417709 RIMS2Q9UQ26 1411 aa22.05■■□□□ 1.12
TTC38-202ENST00000417709 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
TTC38-202ENST00000417709 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
TTC38-202ENST00000417709 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
TTC38-202ENST00000417709 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
TTC38-202ENST00000417709 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
TTC38-202ENST00000417709 ANKRD50Q9ULJ7 1429 aa22.01■■□□□ 1.11
TTC38-202ENST00000417709 ATF3P18847 181 aa22.01■■□□□ 1.11
TTC38-202ENST00000417709 TRIM52Q96A61 297 aa22■■□□□ 1.11
TTC38-202ENST00000417709 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
TTC38-202ENST00000417709 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
TTC38-202ENST00000417709 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
TTC38-202ENST00000417709 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
TTC38-202ENST00000417709 ZNF772Q68DY9 489 aaPredicted RBP21.97■■□□□ 1.11
TTC38-202ENST00000417709 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
TTC38-202ENST00000417709 TMEM131LA2VDJ0 1609 aa21.96■■□□□ 1.11
TTC38-202ENST00000417709 NUTM2BA6NNL0 878 aaPredicted RBP21.96■■□□□ 1.11
TTC38-202ENST00000417709 NUTM2EB1AL46 878 aaPredicted RBP21.96■■□□□ 1.11
TTC38-202ENST00000417709 NUTM2AQ8IVF1 878 aaPredicted RBP21.96■■□□□ 1.11
TTC38-202ENST00000417709 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
TTC38-202ENST00000417709 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
TTC38-202ENST00000417709 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
TTC38-202ENST00000417709 UPF1Q92900 1129 aaKnown RBP eCLIP21.94■■□□□ 1.1
TTC38-202ENST00000417709 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
TTC38-202ENST00000417709 NCOA3Q9Y6Q9 1424 aa21.93■■□□□ 1.1
TTC38-202ENST00000417709 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
TTC38-202ENST00000417709 LRP6O75581 1613 aa21.91■■□□□ 1.1
TTC38-202ENST00000417709 ADAMTS13Q76LX8 1427 aa21.91■■□□□ 1.1
TTC38-202ENST00000417709 RXRBP28702 533 aa21.91■■□□□ 1.1
TTC38-202ENST00000417709 BRINP3Q76B58 766 aa21.9■■□□□ 1.1
TTC38-202ENST00000417709 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
TTC38-202ENST00000417709 ITGAEP38570 1179 aa21.86■■□□□ 1.09
TTC38-202ENST00000417709 E9PCH4 1651 aa21.85■■□□□ 1.09
TTC38-202ENST00000417709 NUP155O75694 1391 aa21.85■■□□□ 1.09
TTC38-202ENST00000417709 PTPRUQ92729 1446 aa21.84■■□□□ 1.09
TTC38-202ENST00000417709 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.09
TTC38-202ENST00000417709 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
TTC38-202ENST00000417709 AFF2P51816 1311 aa21.81■■□□□ 1.08
TTC38-202ENST00000417709 DDX17Q92841 729 aaKnown RBP21.81■■□□□ 1.08
TTC38-202ENST00000417709 SHPRHQ149N8 1683 aa21.81■■□□□ 1.08
TTC38-202ENST00000417709 SRCAPQ6ZRS2 3230 aa21.8■■□□□ 1.08
TTC38-202ENST00000417709 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
TTC38-202ENST00000417709 UNC13BO14795 1591 aa21.79■■□□□ 1.08
TTC38-202ENST00000417709 DIP2AQ14689 1571 aa21.79■■□□□ 1.08
TTC38-202ENST00000417709 QTRT2Q9H974 415 aaKnown RBP21.79■■□□□ 1.08
TTC38-202ENST00000417709 TRPM2O94759 1503 aa21.79■■□□□ 1.08
TTC38-202ENST00000417709 C8orf37Q96NL8 207 aa21.77■■□□□ 1.08
TTC38-202ENST00000417709 PPARGC1BQ86YN6 1023 aaKnown RBP21.75■■□□□ 1.07
TTC38-202ENST00000417709 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
TTC38-202ENST00000417709 IQGAP3Q86VI3 1631 aa21.74■■□□□ 1.07
TTC38-202ENST00000417709 METP08581 1390 aa21.74■■□□□ 1.07
TTC38-202ENST00000417709 NGLY1Q96IV0 654 aa21.73■■□□□ 1.07
TTC38-202ENST00000417709 ASXL1Q8IXJ9 1541 aa21.72■■□□□ 1.07
TTC38-202ENST00000417709 ADAMTS2O95450 1211 aa21.72■■□□□ 1.07
TTC38-202ENST00000417709 RBM6P78332 1123 aaKnown RBP21.72■■□□□ 1.07
TTC38-202ENST00000417709 MST1RQ04912 1400 aa21.72■■□□□ 1.07
TTC38-202ENST00000417709 SETD5Q9C0A6 1442 aa21.72■■□□□ 1.07
TTC38-202ENST00000417709 DCCP43146 1447 aa21.7■■□□□ 1.06
TTC38-202ENST00000417709 NRXN3Q9Y4C0 1643 aa21.67■■□□□ 1.06
TTC38-202ENST00000417709 CDK12Q9NYV4 1490 aaPredicted RBP21.67■■□□□ 1.06
TTC38-202ENST00000417709 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
TTC38-202ENST00000417709 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
TTC38-202ENST00000417709 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
TTC38-202ENST00000417709 NHSL1Q5SYE7 1610 aa21.65■■□□□ 1.06
TTC38-202ENST00000417709 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
TTC38-202ENST00000417709 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
TTC38-202ENST00000417709 SPHKAPQ2M3C7 1700 aa21.62■■□□□ 1.05
TTC38-202ENST00000417709 USP21Q9UK80 565 aa21.61■■□□□ 1.05
TTC38-202ENST00000417709 RGS12O14924 1447 aa21.61■■□□□ 1.05
TTC38-202ENST00000417709 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
TTC38-202ENST00000417709 VGFO15240 615 aaPredicted RBP21.58■■□□□ 1.05
TTC38-202ENST00000417709 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
TTC38-202ENST00000417709 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
TTC38-202ENST00000417709 SOS2Q07890 1332 aaPredicted RBP21.55■■□□□ 1.04
TTC38-202ENST00000417709 ROBO2Q9HCK4 1378 aa21.54■■□□□ 1.04
TTC38-202ENST00000417709 KIF1BO60333 1816 aa21.54■■□□□ 1.04
TTC38-202ENST00000417709 CLTCL1P53675 1640 aa21.54■■□□□ 1.04
TTC38-202ENST00000417709 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
TTC38-202ENST00000417709 EP400Q96L91 3159 aa21.54■■□□□ 1.04
TTC38-202ENST00000417709 ESCO1Q5FWF5 840 aa21.53■■□□□ 1.04
TTC38-202ENST00000417709 FNBP4Q8N3X1 1017 aaPredicted RBP21.53■■□□□ 1.04
TTC38-202ENST00000417709 ATAD2Q6PL18 1390 aa21.52■■□□□ 1.04
TTC38-202ENST00000417709 XPCQ01831 940 aaPredicted RBP21.5■■□□□ 1.03
TTC38-202ENST00000417709 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
TTC38-202ENST00000417709 FOXO3O43524 673 aa21.48■■□□□ 1.03
TTC38-202ENST00000417709 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
TTC38-202ENST00000417709 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms