RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
A1CF-208ENST00000414883 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
A1CF-208ENST00000414883 TRPM2O94759 1503 aa16.51■□□□□ 0.23
A1CF-208ENST00000414883 LRRC7Q96NW7 1537 aa16.51■□□□□ 0.23
A1CF-208ENST00000414883 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
A1CF-208ENST00000414883 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
A1CF-208ENST00000414883 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
A1CF-208ENST00000414883 NWD1Q149M9 1564 aa16.46■□□□□ 0.23
A1CF-208ENST00000414883 CHD2O14647 1828 aaKnown RBP16.45■□□□□ 0.22
A1CF-208ENST00000414883 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
A1CF-208ENST00000414883 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
A1CF-208ENST00000414883 ADAMTS13Q76LX8 1427 aa16.45■□□□□ 0.22
A1CF-208ENST00000414883 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
A1CF-208ENST00000414883 NRXN3Q9Y4C0 1643 aa16.44■□□□□ 0.22
A1CF-208ENST00000414883 KIF1BO60333 1816 aa16.43■□□□□ 0.22
A1CF-208ENST00000414883 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
A1CF-208ENST00000414883 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
A1CF-208ENST00000414883 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
A1CF-208ENST00000414883 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
A1CF-208ENST00000414883 KCNA6P17658 529 aa16.41■□□□□ 0.22
A1CF-208ENST00000414883 NUTM2DQ5VT03 806 aaPredicted RBP16.41■□□□□ 0.22
A1CF-208ENST00000414883 SETD5Q9C0A6 1442 aa16.41■□□□□ 0.22
A1CF-208ENST00000414883 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
A1CF-208ENST00000414883 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
A1CF-208ENST00000414883 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
A1CF-208ENST00000414883 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
A1CF-208ENST00000414883 NKTRP30414 1462 aaKnown RBP16.38■□□□□ 0.21
A1CF-208ENST00000414883 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
A1CF-208ENST00000414883 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
A1CF-208ENST00000414883 PPP1R15AO75807 674 aaPredicted RBP16.37■□□□□ 0.21
A1CF-208ENST00000414883 RAB3GAP2Q9H2M9 1393 aa16.37■□□□□ 0.21
A1CF-208ENST00000414883 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
A1CF-208ENST00000414883 TOM1O60784 492 aa16.35■□□□□ 0.21
A1CF-208ENST00000414883 PPLO60437 1756 aa16.35■□□□□ 0.21
A1CF-208ENST00000414883 PTPRUQ92729 1446 aa16.35■□□□□ 0.21
A1CF-208ENST00000414883 SETD1AO15047 1707 aaKnown RBP16.34■□□□□ 0.21
A1CF-208ENST00000414883 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.2
A1CF-208ENST00000414883 BCANQ96GW7 911 aa16.33■□□□□ 0.2
A1CF-208ENST00000414883 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
A1CF-208ENST00000414883 SPATA31E1Q6ZUB1 1445 aa16.33■□□□□ 0.2
A1CF-208ENST00000414883 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
A1CF-208ENST00000414883 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
A1CF-208ENST00000414883 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
A1CF-208ENST00000414883 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
A1CF-208ENST00000414883 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
A1CF-208ENST00000414883 METP08581 1390 aa16.3■□□□□ 0.2
A1CF-208ENST00000414883 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
A1CF-208ENST00000414883 HSPA1LP34931 641 aa16.29■□□□□ 0.2
A1CF-208ENST00000414883 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
A1CF-208ENST00000414883 RPGRIP1LQ68CZ1 1315 aa16.27■□□□□ 0.2
A1CF-208ENST00000414883 HRCP23327 699 aa16.27■□□□□ 0.2
A1CF-208ENST00000414883 NCOA3Q9Y6Q9 1424 aa16.27■□□□□ 0.19
A1CF-208ENST00000414883 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
A1CF-208ENST00000414883 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
A1CF-208ENST00000414883 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
A1CF-208ENST00000414883 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
A1CF-208ENST00000414883 FAM135BQ49AJ0 1406 aa16.24■□□□□ 0.19
A1CF-208ENST00000414883 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
A1CF-208ENST00000414883 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
A1CF-208ENST00000414883 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
A1CF-208ENST00000414883 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
A1CF-208ENST00000414883 MSH6P52701 1360 aa16.22■□□□□ 0.19
A1CF-208ENST00000414883 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
A1CF-208ENST00000414883 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
A1CF-208ENST00000414883 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
A1CF-208ENST00000414883 NRXN1Q9ULB1 1477 aa16.19■□□□□ 0.18
A1CF-208ENST00000414883 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
A1CF-208ENST00000414883 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
A1CF-208ENST00000414883 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
A1CF-208ENST00000414883 ROBO2Q9HCK4 1378 aa16.17■□□□□ 0.18
A1CF-208ENST00000414883 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
A1CF-208ENST00000414883 DCCP43146 1447 aa16.16■□□□□ 0.18
A1CF-208ENST00000414883 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
A1CF-208ENST00000414883 ADGRL3Q9HAR2 1447 aa16.15■□□□□ 0.18
A1CF-208ENST00000414883 MYOM2P54296 1465 aa16.15■□□□□ 0.18
A1CF-208ENST00000414883 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
A1CF-208ENST00000414883 ILDR2Q71H61 639 aa16.14■□□□□ 0.17
A1CF-208ENST00000414883 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
A1CF-208ENST00000414883 TECPR2O15040 1411 aa16.12■□□□□ 0.17
A1CF-208ENST00000414883 MST1RQ04912 1400 aa16.12■□□□□ 0.17
A1CF-208ENST00000414883 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
A1CF-208ENST00000414883 KCNA4P22459 653 aa16.12■□□□□ 0.17
A1CF-208ENST00000414883 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
A1CF-208ENST00000414883 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
A1CF-208ENST00000414883 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
A1CF-208ENST00000414883 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
A1CF-208ENST00000414883 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
A1CF-208ENST00000414883 LAMC1P11047 1609 aa16.09■□□□□ 0.17
A1CF-208ENST00000414883 ATF3P18847 181 aa16.09■□□□□ 0.17
A1CF-208ENST00000414883 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
A1CF-208ENST00000414883 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
A1CF-208ENST00000414883 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.16
A1CF-208ENST00000414883 BRINP3Q76B58 766 aa16.08■□□□□ 0.16
A1CF-208ENST00000414883 ABCC11Q96J66 1382 aa16.08■□□□□ 0.16
A1CF-208ENST00000414883 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
A1CF-208ENST00000414883 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
A1CF-208ENST00000414883 NHSL1Q5SYE7 1610 aa16.07■□□□□ 0.16
A1CF-208ENST00000414883 CFAP70Q5T0N1 1121 aa16.06■□□□□ 0.16
A1CF-208ENST00000414883 PLEKHH1Q9ULM0 1364 aa16.05■□□□□ 0.16
A1CF-208ENST00000414883 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms