RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 COPS2P61201 443 aa10.11□□□□□ -0.79
LINC00342-201ENST00000412393 PRR20EP86478 221 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 PRR20CP86479 221 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 PRR20DP86480 221 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 PRR20BP86481 221 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 PRR20AP86496 221 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
LINC00342-201ENST00000412393 SLC19A1P41440 591 aa10.09□□□□□ -0.79
LINC00342-201ENST00000412393 PKDCCQ504Y2 493 aa10.09□□□□□ -0.79
LINC00342-201ENST00000412393 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
LINC00342-201ENST00000412393 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
LINC00342-201ENST00000412393 ZNF598Q86UK7 904 aaKnown RBP10.07□□□□□ -0.8
LINC00342-201ENST00000412393 ANKLE1Q8NAG6 615 aa10.07□□□□□ -0.8
LINC00342-201ENST00000412393 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
LINC00342-201ENST00000412393 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
LINC00342-201ENST00000412393 TRIM67Q6ZTA4 783 aa10.06□□□□□ -0.8
LINC00342-201ENST00000412393 SPRYD3Q8NCJ5 442 aa10.06□□□□□ -0.8
LINC00342-201ENST00000412393 EYA1Q99502 592 aa10.06□□□□□ -0.8
LINC00342-201ENST00000412393 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
LINC00342-201ENST00000412393 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
LINC00342-201ENST00000412393 MYT1Q01538 1121 aa10.03□□□□□ -0.8
LINC00342-201ENST00000412393 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
LINC00342-201ENST00000412393 DNAJB2P25686 324 aa10.01□□□□□ -0.81
LINC00342-201ENST00000412393 KMT5BQ4FZB7 885 aa10.01□□□□□ -0.81
LINC00342-201ENST00000412393 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
LINC00342-201ENST00000412393 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
LINC00342-201ENST00000412393 SMARCA4P51532 1647 aa9.99□□□□□ -0.81
LINC00342-201ENST00000412393 LMOD2Q6P5Q4 547 aa9.98□□□□□ -0.81
LINC00342-201ENST00000412393 ZNF697Q5TEC3 545 aa9.97□□□□□ -0.81
LINC00342-201ENST00000412393 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
LINC00342-201ENST00000412393 EMID1Q96A84 441 aaPredicted RBP9.97□□□□□ -0.81
LINC00342-201ENST00000412393 TMEM134Q9H6X4 195 aa9.96□□□□□ -0.82
LINC00342-201ENST00000412393 NCAPD3P42695 1498 aa9.96□□□□□ -0.82
LINC00342-201ENST00000412393 GDF9O60383 454 aa9.95□□□□□ -0.82
LINC00342-201ENST00000412393 NR1I2O75469 434 aa9.95□□□□□ -0.82
LINC00342-201ENST00000412393 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
LINC00342-201ENST00000412393 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
LINC00342-201ENST00000412393 BAZ1AQ9NRL2 1556 aaPredicted RBP9.95□□□□□ -0.82
LINC00342-201ENST00000412393 FAM187AA6NFU0 413 aa9.94□□□□□ -0.82
LINC00342-201ENST00000412393 ADH1BP00325 375 aa9.94□□□□□ -0.82
LINC00342-201ENST00000412393 S1PR4O95977 384 aa9.93□□□□□ -0.82
LINC00342-201ENST00000412393 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
LINC00342-201ENST00000412393 LIAT1Q6ZQX7 453 aa9.92□□□□□ -0.82
LINC00342-201ENST00000412393 TLL1O43897 1013 aa9.91□□□□□ -0.82
LINC00342-201ENST00000412393 HMGXB3Q12766 1538 aa9.91□□□□□ -0.82
LINC00342-201ENST00000412393 PTGDRQ13258 359 aa9.9□□□□□ -0.82
LINC00342-201ENST00000412393 CRIPAKQ8N1N5 446 aa9.9□□□□□ -0.82
LINC00342-201ENST00000412393 CFHP08603 1231 aa9.89□□□□□ -0.83
LINC00342-201ENST00000412393 SLC6A16Q9GZN6 736 aa9.89□□□□□ -0.83
LINC00342-201ENST00000412393 ADGRG1Q9Y653 693 aa9.89□□□□□ -0.83
LINC00342-201ENST00000412393 POTECB2RU33 542 aa9.88□□□□□ -0.83
LINC00342-201ENST00000412393 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
LINC00342-201ENST00000412393 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
LINC00342-201ENST00000412393 PEG3Q9GZU2 1588 aa9.88□□□□□ -0.83
LINC00342-201ENST00000412393 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
LINC00342-201ENST00000412393 TNFRSF10AO00220 468 aa9.87□□□□□ -0.83
LINC00342-201ENST00000412393 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
LINC00342-201ENST00000412393 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
LINC00342-201ENST00000412393 ARHGEF1Q92888 912 aaKnown RBP9.87□□□□□ -0.83
LINC00342-201ENST00000412393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
LINC00342-201ENST00000412393 RCCD1A6NED2 376 aa9.86□□□□□ -0.83
LINC00342-201ENST00000412393 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
LINC00342-201ENST00000412393 RPIAP49247 311 aa9.85□□□□□ -0.83
LINC00342-201ENST00000412393 AVPP01185 164 aa9.83□□□□□ -0.84
LINC00342-201ENST00000412393 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
LINC00342-201ENST00000412393 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
LINC00342-201ENST00000412393 ST8SIA5O15466 376 aa9.81□□□□□ -0.84
LINC00342-201ENST00000412393 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
LINC00342-201ENST00000412393 OATP04181 439 aa9.81□□□□□ -0.84
LINC00342-201ENST00000412393 SLC10A3P09131 477 aa9.81□□□□□ -0.84
LINC00342-201ENST00000412393 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
LINC00342-201ENST00000412393 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
LINC00342-201ENST00000412393 SPSB2Q99619 263 aa9.8□□□□□ -0.84
LINC00342-201ENST00000412393 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
LINC00342-201ENST00000412393 PLA2G2CQ5R387 149 aa9.79□□□□□ -0.84
LINC00342-201ENST00000412393 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
LINC00342-201ENST00000412393 WIZO95785 1651 aa9.79□□□□□ -0.84
LINC00342-201ENST00000412393 MLLT3P42568 568 aaPredicted RBP9.78□□□□□ -0.84
LINC00342-201ENST00000412393 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
LINC00342-201ENST00000412393 TOR4AQ9NXH8 423 aa9.78□□□□□ -0.84
LINC00342-201ENST00000412393 STK17AQ9UEE5 414 aa9.78□□□□□ -0.84
LINC00342-201ENST00000412393 NESP48681 1621 aa9.78□□□□□ -0.84
LINC00342-201ENST00000412393 AXIN1O15169 862 aa9.77□□□□□ -0.85
LINC00342-201ENST00000412393 WFS1O76024 890 aa9.77□□□□□ -0.85
LINC00342-201ENST00000412393 FCHSD2O94868 740 aa9.77□□□□□ -0.85
LINC00342-201ENST00000412393 FOXC1Q12948 553 aa9.76□□□□□ -0.85
LINC00342-201ENST00000412393 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
LINC00342-201ENST00000412393 NUTM2FA1L443 756 aa9.75□□□□□ -0.85
LINC00342-201ENST00000412393 WIPF1O43516 503 aa9.75□□□□□ -0.85
LINC00342-201ENST00000412393 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
LINC00342-201ENST00000412393 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
LINC00342-201ENST00000412393 LAMC3Q9Y6N6 1575 aa9.75□□□□□ -0.85
LINC00342-201ENST00000412393 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
LINC00342-201ENST00000412393 CUX2O14529 1486 aa9.73□□□□□ -0.85
LINC00342-201ENST00000412393 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
LINC00342-201ENST00000412393 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.86
LINC00342-201ENST00000412393 HIC1Q14526 733 aa9.7□□□□□ -0.86
LINC00342-201ENST00000412393 GMPR2Q9P2T1 348 aaKnown RBP9.7□□□□□ -0.86
LINC00342-201ENST00000412393 FCF1Q9Y324 198 aaKnown RBP9.7□□□□□ -0.86
LINC00342-201ENST00000412393 RSF1Q96T23 1441 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms