RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 RAPGEF3O95398 923 aa15.52■□□□□ 0.08
PCNX4-204ENST00000406949 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.07
PCNX4-204ENST00000406949 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.07
PCNX4-204ENST00000406949 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.07
PCNX4-204ENST00000406949 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
PCNX4-204ENST00000406949 SRPK2P78362 688 aaKnown RBP15.51■□□□□ 0.07
PCNX4-204ENST00000406949 C20orf194Q5TEA3 1177 aa15.51■□□□□ 0.07
PCNX4-204ENST00000406949 IPO9Q96P70 1041 aaKnown RBP15.5■□□□□ 0.07
PCNX4-204ENST00000406949 SLC12A5Q9H2X9 1139 aa15.5■□□□□ 0.07
PCNX4-204ENST00000406949 MAST1Q9Y2H9 1570 aa15.5■□□□□ 0.07
PCNX4-204ENST00000406949 PDE4AP27815 886 aa15.5■□□□□ 0.07
PCNX4-204ENST00000406949 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
PCNX4-204ENST00000406949 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
PCNX4-204ENST00000406949 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
PCNX4-204ENST00000406949 U2SURPO15042 1029 aaKnown RBP15.48■□□□□ 0.07
PCNX4-204ENST00000406949 POGKQ9P215 609 aa15.48■□□□□ 0.07
PCNX4-204ENST00000406949 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
PCNX4-204ENST00000406949 MLECQ14165 292 aa15.48■□□□□ 0.07
PCNX4-204ENST00000406949 WDR7Q9Y4E6 1490 aa15.48■□□□□ 0.07
PCNX4-204ENST00000406949 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
PCNX4-204ENST00000406949 POLR1AO95602 1720 aaPredicted RBP15.47■□□□□ 0.07
PCNX4-204ENST00000406949 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
PCNX4-204ENST00000406949 ZCCHC11Q5TAX3 1644 aaKnown RBP15.47■□□□□ 0.07
PCNX4-204ENST00000406949 ASXL2Q76L83 1435 aa15.46■□□□□ 0.07
PCNX4-204ENST00000406949 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.07
PCNX4-204ENST00000406949 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCNX4-204ENST00000406949 ANO8Q9HCE9 1232 aaPredicted RBP15.46■□□□□ 0.06
PCNX4-204ENST00000406949 BCL2L13Q9BXK5 485 aa15.45■□□□□ 0.06
PCNX4-204ENST00000406949 TRPM1Q7Z4N2 1603 aa15.45■□□□□ 0.06
PCNX4-204ENST00000406949 EIF2AK4Q9P2K8 1649 aaKnown RBP15.45■□□□□ 0.06
PCNX4-204ENST00000406949 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
PCNX4-204ENST00000406949 ABCC1P33527 1531 aa15.44■□□□□ 0.06
PCNX4-204ENST00000406949 CYB5RLQ6IPT4 315 aa15.44■□□□□ 0.06
PCNX4-204ENST00000406949 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
PCNX4-204ENST00000406949 ATP10AO60312 1499 aa15.43■□□□□ 0.06
PCNX4-204ENST00000406949 BCAR3O75815 825 aa15.43■□□□□ 0.06
PCNX4-204ENST00000406949 NOS1P29475 1434 aa15.43■□□□□ 0.06
PCNX4-204ENST00000406949 UNC13BO14795 1591 aa15.43■□□□□ 0.06
PCNX4-204ENST00000406949 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
PCNX4-204ENST00000406949 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
PCNX4-204ENST00000406949 CFAP65Q6ZU64 1925 aaKnown RBP15.42■□□□□ 0.06
PCNX4-204ENST00000406949 IQGAP3Q86VI3 1631 aa15.42■□□□□ 0.06
PCNX4-204ENST00000406949 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
PCNX4-204ENST00000406949 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 CD109Q6YHK3 1445 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 MINK1Q8N4C8 1332 aaPredicted RBP15.41■□□□□ 0.06
PCNX4-204ENST00000406949 RTEL1-TNFRSF6BF6WH68 1400 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 UGGT1Q9NYU2 1555 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 ATP7AQ04656 1500 aa15.41■□□□□ 0.06
PCNX4-204ENST00000406949 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
PCNX4-204ENST00000406949 DEKP35659 375 aaKnown RBP15.4■□□□□ 0.06
PCNX4-204ENST00000406949 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
PCNX4-204ENST00000406949 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
PCNX4-204ENST00000406949 E9PSI1 815 aa15.4■□□□□ 0.06
PCNX4-204ENST00000406949 MTHFSP49914 203 aa15.4■□□□□ 0.06
PCNX4-204ENST00000406949 CARD14Q9BXL6 1004 aa15.4■□□□□ 0.06
PCNX4-204ENST00000406949 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
PCNX4-204ENST00000406949 CGNL1Q0VF96 1302 aa15.39■□□□□ 0.05
PCNX4-204ENST00000406949 NEFMP07197 916 aa15.39■□□□□ 0.05
PCNX4-204ENST00000406949 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
PCNX4-204ENST00000406949 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
PCNX4-204ENST00000406949 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
PCNX4-204ENST00000406949 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
PCNX4-204ENST00000406949 UHRF1BP1LA0JNW5 1464 aa15.37■□□□□ 0.05
PCNX4-204ENST00000406949 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
PCNX4-204ENST00000406949 PANK1Q8TE04 598 aa15.37■□□□□ 0.05
PCNX4-204ENST00000406949 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
PCNX4-204ENST00000406949 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
PCNX4-204ENST00000406949 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
PCNX4-204ENST00000406949 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
PCNX4-204ENST00000406949 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
PCNX4-204ENST00000406949 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
PCNX4-204ENST00000406949 ZFYVE16Q7Z3T8 1539 aa15.36■□□□□ 0.05
PCNX4-204ENST00000406949 FTSJ3Q8IY81 847 aaKnown RBP15.35■□□□□ 0.05
PCNX4-204ENST00000406949 BACH2Q9BYV9 841 aa15.35■□□□□ 0.05
PCNX4-204ENST00000406949 MS4A1P11836 297 aa15.35■□□□□ 0.05
PCNX4-204ENST00000406949 DDRGK1Q96HY6 314 aa15.34■□□□□ 0.05
PCNX4-204ENST00000406949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCNX4-204ENST00000406949 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.05
PCNX4-204ENST00000406949 TRPM2O94759 1503 aa15.33■□□□□ 0.04
PCNX4-204ENST00000406949 RUNDC1Q96C34 613 aa15.33■□□□□ 0.04
PCNX4-204ENST00000406949 IDI1Q13907 227 aa15.32■□□□□ 0.04
PCNX4-204ENST00000406949 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
PCNX4-204ENST00000406949 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
PCNX4-204ENST00000406949 ZNF518AQ6AHZ1 1483 aa15.32■□□□□ 0.04
PCNX4-204ENST00000406949 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
PCNX4-204ENST00000406949 ARXQ96QS3 562 aa15.31■□□□□ 0.04
PCNX4-204ENST00000406949 E9PCH4 1651 aa15.31■□□□□ 0.04
PCNX4-204ENST00000406949 CLTCL1P53675 1640 aa15.31■□□□□ 0.04
PCNX4-204ENST00000406949 PTPRTO14522 1441 aa15.31■□□□□ 0.04
PCNX4-204ENST00000406949 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
PCNX4-204ENST00000406949 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
PCNX4-204ENST00000406949 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
PCNX4-204ENST00000406949 HDGFL2Q7Z4V5 671 aaPredicted RBP15.29■□□□□ 0.04
PCNX4-204ENST00000406949 TERF2IPQ9NYB0 399 aa15.29■□□□□ 0.04
PCNX4-204ENST00000406949 CLASP1Q7Z460 1538 aa15.29■□□□□ 0.04
PCNX4-204ENST00000406949 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
PCNX4-204ENST00000406949 FAM161AQ3B820 660 aa15.28■□□□□ 0.04
PCNX4-204ENST00000406949 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms