RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 IQGAP3Q86VI3 1631 aa24.52■■□□□ 1.52
CGREF1-206ENST00000405600 TOM1O60784 492 aa24.51■■□□□ 1.51
CGREF1-206ENST00000405600 SLC26A8Q96RN1 970 aa24.49■■□□□ 1.51
CGREF1-206ENST00000405600 ADGRB3O60242 1522 aa24.48■■□□□ 1.51
CGREF1-206ENST00000405600 PPP1R15AO75807 674 aaPredicted RBP24.48■■□□□ 1.51
CGREF1-206ENST00000405600 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
CGREF1-206ENST00000405600 E9PCH4 1651 aa24.47■■□□□ 1.51
CGREF1-206ENST00000405600 KDM5AP29375 1690 aaKnown RBP24.46■■□□□ 1.51
CGREF1-206ENST00000405600 NUTM2DQ5VT03 806 aaPredicted RBP24.45■■□□□ 1.5
CGREF1-206ENST00000405600 DHX57Q6P158 1386 aaKnown RBP24.44■■□□□ 1.5
CGREF1-206ENST00000405600 MYO5BQ9ULV0 1848 aa24.44■■□□□ 1.5
CGREF1-206ENST00000405600 HDGFP51858 240 aaKnown RBP24.43■■□□□ 1.5
CGREF1-206ENST00000405600 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
CGREF1-206ENST00000405600 LRRC7Q96NW7 1537 aa24.42■■□□□ 1.5
CGREF1-206ENST00000405600 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
CGREF1-206ENST00000405600 RIMS2Q9UQ26 1411 aa24.39■■□□□ 1.5
CGREF1-206ENST00000405600 HSPA1LP34931 641 aa24.37■■□□□ 1.49
CGREF1-206ENST00000405600 RBM33Q96EV2 1170 aaKnown RBP24.37■■□□□ 1.49
CGREF1-206ENST00000405600 TMEM131LA2VDJ0 1609 aa24.37■■□□□ 1.49
CGREF1-206ENST00000405600 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
CGREF1-206ENST00000405600 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
CGREF1-206ENST00000405600 KCNA6P17658 529 aa24.35■■□□□ 1.49
CGREF1-206ENST00000405600 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.35■■□□□ 1.49
CGREF1-206ENST00000405600 ZNF326Q5BKZ1 582 aaKnown RBP24.34■■□□□ 1.49
CGREF1-206ENST00000405600 ZFYVE9O95405 1425 aa24.32■■□□□ 1.48
CGREF1-206ENST00000405600 PLEKHG1Q9ULL1 1385 aa24.31■■□□□ 1.48
CGREF1-206ENST00000405600 SPHKAPQ2M3C7 1700 aa24.29■■□□□ 1.48
CGREF1-206ENST00000405600 TMEM94Q12767 1356 aa24.29■■□□□ 1.48
CGREF1-206ENST00000405600 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
CGREF1-206ENST00000405600 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
CGREF1-206ENST00000405600 TRPM2O94759 1503 aa24.26■■□□□ 1.47
CGREF1-206ENST00000405600 TBX22Q9Y458 520 aa24.24■■□□□ 1.47
CGREF1-206ENST00000405600 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
CGREF1-206ENST00000405600 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
CGREF1-206ENST00000405600 FOXD1Q16676 465 aa24.19■■□□□ 1.46
CGREF1-206ENST00000405600 ILDR2Q71H61 639 aa24.19■■□□□ 1.46
CGREF1-206ENST00000405600 CLTCL1P53675 1640 aa24.18■■□□□ 1.46
CGREF1-206ENST00000405600 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
CGREF1-206ENST00000405600 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
CGREF1-206ENST00000405600 ADAMTS13Q76LX8 1427 aa24.17■■□□□ 1.46
CGREF1-206ENST00000405600 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
CGREF1-206ENST00000405600 MSH6P52701 1360 aa24.16■■□□□ 1.46
CGREF1-206ENST00000405600 KIF1BO60333 1816 aa24.15■■□□□ 1.46
CGREF1-206ENST00000405600 AMOTL2Q9Y2J4 779 aa24.14■■□□□ 1.46
CGREF1-206ENST00000405600 CCDC144AA2RUR9 1427 aa24.13■■□□□ 1.45
CGREF1-206ENST00000405600 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
CGREF1-206ENST00000405600 TIMELESSQ9UNS1 1208 aa24.1■■□□□ 1.45
CGREF1-206ENST00000405600 SLAIN2Q9P270 581 aa24.1■■□□□ 1.45
CGREF1-206ENST00000405600 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.44
CGREF1-206ENST00000405600 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
CGREF1-206ENST00000405600 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
CGREF1-206ENST00000405600 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
CGREF1-206ENST00000405600 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
CGREF1-206ENST00000405600 MED1Q15648 1581 aaPredicted RBP24.06■■□□□ 1.44
CGREF1-206ENST00000405600 ROBO1Q9Y6N7 1651 aa24.06■■□□□ 1.44
CGREF1-206ENST00000405600 ATF3P18847 181 aa24.06■■□□□ 1.44
CGREF1-206ENST00000405600 NEXMIFQ5QGS0 1516 aa24.06■■□□□ 1.44
CGREF1-206ENST00000405600 VGFO15240 615 aaPredicted RBP24.05■■□□□ 1.44
CGREF1-206ENST00000405600 RGL3Q3MIN7 710 aa24.05■■□□□ 1.44
CGREF1-206ENST00000405600 NRXN3Q9Y4C0 1643 aa24.04■■□□□ 1.44
CGREF1-206ENST00000405600 METP08581 1390 aa24.04■■□□□ 1.44
CGREF1-206ENST00000405600 C19orf44Q9H6X5 657 aa24.03■■□□□ 1.44
CGREF1-206ENST00000405600 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
CGREF1-206ENST00000405600 CADPS2Q86UW7 1296 aa24■■□□□ 1.43
CGREF1-206ENST00000405600 NCOA3Q9Y6Q9 1424 aa23.99■■□□□ 1.43
CGREF1-206ENST00000405600 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
CGREF1-206ENST00000405600 SPATA31E1Q6ZUB1 1445 aa23.98■■□□□ 1.43
CGREF1-206ENST00000405600 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
CGREF1-206ENST00000405600 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
CGREF1-206ENST00000405600 SIN3AQ96ST3 1273 aa23.95■■□□□ 1.42
CGREF1-206ENST00000405600 SOCS7O14512 581 aa23.94■■□□□ 1.42
CGREF1-206ENST00000405600 TONSLQ96HA7 1378 aa23.94■■□□□ 1.42
CGREF1-206ENST00000405600 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
CGREF1-206ENST00000405600 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
CGREF1-206ENST00000405600 PPLO60437 1756 aa23.92■■□□□ 1.42
CGREF1-206ENST00000405600 ADGRF5Q8IZF2 1346 aa23.9■■□□□ 1.42
CGREF1-206ENST00000405600 STK26Q9P289 416 aa23.86■■□□□ 1.41
CGREF1-206ENST00000405600 BRINP3Q76B58 766 aa23.85■■□□□ 1.41
CGREF1-206ENST00000405600 JCADQ9P266 1359 aa23.83■■□□□ 1.41
CGREF1-206ENST00000405600 SETD1AO15047 1707 aaKnown RBP23.83■■□□□ 1.4
CGREF1-206ENST00000405600 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.4
CGREF1-206ENST00000405600 ROBO2Q9HCK4 1378 aa23.82■■□□□ 1.4
CGREF1-206ENST00000405600 ADGRL3Q9HAR2 1447 aa23.82■■□□□ 1.4
CGREF1-206ENST00000405600 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
CGREF1-206ENST00000405600 DCCP43146 1447 aa23.81■■□□□ 1.4
CGREF1-206ENST00000405600 MYOM2P54296 1465 aa23.81■■□□□ 1.4
CGREF1-206ENST00000405600 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
CGREF1-206ENST00000405600 MST1RQ04912 1400 aa23.8■■□□□ 1.4
CGREF1-206ENST00000405600 DDX17Q92841 729 aaKnown RBP23.8■■□□□ 1.4
CGREF1-206ENST00000405600 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
CGREF1-206ENST00000405600 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
CGREF1-206ENST00000405600 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
CGREF1-206ENST00000405600 COL16A1Q07092 1604 aaPredicted RBP23.78■■□□□ 1.4
CGREF1-206ENST00000405600 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
CGREF1-206ENST00000405600 NUTM2BA6NNL0 878 aaPredicted RBP23.77■■□□□ 1.4
CGREF1-206ENST00000405600 NUTM2EB1AL46 878 aaPredicted RBP23.77■■□□□ 1.4
CGREF1-206ENST00000405600 NUTM2AQ8IVF1 878 aaPredicted RBP23.77■■□□□ 1.4
CGREF1-206ENST00000405600 IFT172Q9UG01 1749 aa23.76■■□□□ 1.39
CGREF1-206ENST00000405600 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CGREF1-206ENST00000405600 ASXL1Q8IXJ9 1541 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms