RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 ANO2Q9NQ90 1003 aa9.6□□□□□ -0.87
RBFOX2-205ENST00000405409 ANKRD62A6NC57 917 aa9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 NEFHP12036 1026 aa9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 CCDC39Q9UFE4 941 aa9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 CADPSQ9ULU8 1353 aa9.59□□□□□ -0.87
RBFOX2-205ENST00000405409 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.88
RBFOX2-205ENST00000405409 KIAA0754O94854 1291 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 ANKRD45Q5TZF3 282 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 CHMP4CQ96CF2 233 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 STK26Q9P289 416 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 SOCS7O14512 581 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 CFDP1Q9UEE9 299 aaPredicted RBP9.58□□□□□ -0.88
RBFOX2-205ENST00000405409 ENOX2Q16206 610 aaKnown RBP9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 LAMC3Q9Y6N6 1575 aa9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 HDAC5Q9UQL6 1122 aa9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 CENPJQ9HC77 1338 aaPredicted RBP9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 CCDC43Q96MW1 224 aaKnown RBP9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
RBFOX2-205ENST00000405409 SEPT7Q16181 437 aaKnown RBP9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 CT47B1P0C2W7 299 aaPredicted RBP9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 AMOTL1Q8IY63 956 aa9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 DHX16O60231 1041 aaKnown RBP9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 PDE4AP27815 886 aa9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 INCENPQ9NQS7 918 aa9.56□□□□□ -0.88
RBFOX2-205ENST00000405409 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
RBFOX2-205ENST00000405409 GIMAP7Q8NHV1 300 aa9.55□□□□□ -0.88
RBFOX2-205ENST00000405409 CENPHQ9H3R5 247 aa9.55□□□□□ -0.88
RBFOX2-205ENST00000405409 GOLGA6L7A0A1B0GV03 622 aa9.55□□□□□ -0.88
RBFOX2-205ENST00000405409 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
RBFOX2-205ENST00000405409 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 GOLGA6L10A6NI86 522 aa9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 OFD1O75665 1012 aa9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 NOL10Q9BSC4 688 aaKnown RBP9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 VPS37CA5D8V6 355 aaPredicted RBP9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 CPLX2Q6PUV4 134 aaKnown RBP9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 CENPQQ7L2Z9 268 aaPredicted RBP9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 KANK1Q14678 1352 aa9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 CPLX1O14810 134 aa9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 GTF2E1P29083 439 aaPredicted RBP9.54□□□□□ -0.88
RBFOX2-205ENST00000405409 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 NASPP49321 788 aaPredicted RBP9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 NAT10Q9H0A0 1025 aaKnown RBP9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 ERLIN2O94905 339 aa9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 RALBP1Q15311 655 aa9.53□□□□□ -0.88
RBFOX2-205ENST00000405409 ANKRD18AQ8IVF6 992 aa9.52□□□□□ -0.88
RBFOX2-205ENST00000405409 SMC2O95347 1197 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 DEF6Q9H4E7 631 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 CGNL1Q0VF96 1302 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 ERICH4A6NGS2 130 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 CWC22Q9HCG8 908 aaKnown RBP9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 ROCK2O75116 1388 aaKnown RBP9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 SMC3Q9UQE7 1217 aa9.52□□□□□ -0.89
RBFOX2-205ENST00000405409 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 FAM193AP78312 1265 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 ERICH2A1L162 156 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 TICAM2Q86XR7 235 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 RUFY2Q8WXA3 655 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 CHMP5Q9NZZ3 219 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 KDM4AO75164 1064 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 TAX1BP1Q86VP1 789 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 PAF1Q8N7H5 531 aa9.51□□□□□ -0.89
RBFOX2-205ENST00000405409 SMARCE1Q969G3 411 aa9.5□□□□□ -0.89
RBFOX2-205ENST00000405409 NF2P35240 595 aa9.5□□□□□ -0.89
RBFOX2-205ENST00000405409 CEP162Q5TB80 1403 aa9.5□□□□□ -0.89
RBFOX2-205ENST00000405409 ZKSCAN1P17029 563 aaPredicted RBP9.5□□□□□ -0.89
RBFOX2-205ENST00000405409 USP8P40818 1118 aa9.5□□□□□ -0.89
RBFOX2-205ENST00000405409 CCP110O43303 1012 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 BRPF1P55201 1214 aaPredicted RBP9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 MLECQ14165 292 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 LRRFIP1Q32MZ4 808 aaKnown RBP9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 GOLGA3Q08378 1498 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 PLIN1O60240 522 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 SPC24Q8NBT2 197 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 RNF214Q8ND24 703 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 IFT140Q96RY7 1462 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 IBSPP21815 317 aaPredicted RBP9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 TRIM5Q9C035 493 aa9.49□□□□□ -0.89
RBFOX2-205ENST00000405409 TRDNQ13061 729 aa9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 BCCIPQ9P287 314 aaKnown RBP eCLIP9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 BAZ1AQ9NRL2 1556 aaPredicted RBP9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 SYCP1Q15431 976 aa9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 REC8O95072 547 aa9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms