RNA–Protein interactions for RNA: ENST00000404125.5

PSME4-202, Transcript of proteasome activator subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSME4, Length 7,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-202ENST00000404125 NLRP13Q86W25 1043 aa17.1■□□□□ 0.33
PSME4-202ENST00000404125 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
PSME4-202ENST00000404125 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
PSME4-202ENST00000404125 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
PSME4-202ENST00000404125 NLRP6P59044 892 aa17.08■□□□□ 0.33
PSME4-202ENST00000404125 SYNJ1O43426 1573 aa17.08■□□□□ 0.33
PSME4-202ENST00000404125 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
PSME4-202ENST00000404125 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
PSME4-202ENST00000404125 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
PSME4-202ENST00000404125 RASSF8Q8NHQ8 419 aa17.06■□□□□ 0.32
PSME4-202ENST00000404125 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
PSME4-202ENST00000404125 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
PSME4-202ENST00000404125 APPP05067 770 aa17.06■□□□□ 0.32
PSME4-202ENST00000404125 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
PSME4-202ENST00000404125 TSPYL4Q9UJ04 414 aa17.05■□□□□ 0.32
PSME4-202ENST00000404125 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
PSME4-202ENST00000404125 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
PSME4-202ENST00000404125 TSHZ2Q9NRE2 1034 aa17.05■□□□□ 0.32
PSME4-202ENST00000404125 CFTRP13569 1480 aa17.04■□□□□ 0.32
PSME4-202ENST00000404125 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
PSME4-202ENST00000404125 RSPH4AQ5TD94 716 aa17.04■□□□□ 0.32
PSME4-202ENST00000404125 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
PSME4-202ENST00000404125 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
PSME4-202ENST00000404125 VPS37DQ86XT2 251 aa17.02■□□□□ 0.32
PSME4-202ENST00000404125 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
PSME4-202ENST00000404125 CEBPAP49715 358 aaPredicted RBP17.01■□□□□ 0.31
PSME4-202ENST00000404125 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
PSME4-202ENST00000404125 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
PSME4-202ENST00000404125 KIF21BO75037 1637 aa17.01■□□□□ 0.31
PSME4-202ENST00000404125 DEKP35659 375 aaKnown RBP17.01■□□□□ 0.31
PSME4-202ENST00000404125 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
PSME4-202ENST00000404125 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
PSME4-202ENST00000404125 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
PSME4-202ENST00000404125 MTHFSP49914 203 aa16.99■□□□□ 0.31
PSME4-202ENST00000404125 PES1O00541 588 aaKnown RBP16.99■□□□□ 0.31
PSME4-202ENST00000404125 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
PSME4-202ENST00000404125 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
PSME4-202ENST00000404125 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
PSME4-202ENST00000404125 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
PSME4-202ENST00000404125 MARCH6O60337 910 aa16.98■□□□□ 0.31
PSME4-202ENST00000404125 HMMRO75330 724 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 MYL6BP14649 208 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
PSME4-202ENST00000404125 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
PSME4-202ENST00000404125 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 FAM161AQ3B820 660 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
PSME4-202ENST00000404125 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
PSME4-202ENST00000404125 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
PSME4-202ENST00000404125 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
PSME4-202ENST00000404125 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.3
PSME4-202ENST00000404125 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
PSME4-202ENST00000404125 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
PSME4-202ENST00000404125 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
PSME4-202ENST00000404125 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
PSME4-202ENST00000404125 ADAMTS8Q9UP79 889 aa16.95■□□□□ 0.3
PSME4-202ENST00000404125 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
PSME4-202ENST00000404125 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
PSME4-202ENST00000404125 DHX16O60231 1041 aaKnown RBP16.94■□□□□ 0.3
PSME4-202ENST00000404125 PRM3Q9NNZ6 103 aa16.94■□□□□ 0.3
PSME4-202ENST00000404125 LRRC9Q6ZRR7 1453 aa16.94■□□□□ 0.3
PSME4-202ENST00000404125 UACAQ9BZF9 1416 aa16.93■□□□□ 0.3
PSME4-202ENST00000404125 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
PSME4-202ENST00000404125 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 GOLGA6L6A8MZA4 724 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 NEXNQ0ZGT2 675 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 ZKSCAN2Q63HK3 967 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
PSME4-202ENST00000404125 ANKRD50Q9ULJ7 1429 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 BICDL1Q6ZP65 573 aa16.92■□□□□ 0.3
PSME4-202ENST00000404125 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
PSME4-202ENST00000404125 SIL1Q9H173 461 aa16.91■□□□□ 0.3
PSME4-202ENST00000404125 H3BQV1 296 aa16.91■□□□□ 0.3
PSME4-202ENST00000404125 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
PSME4-202ENST00000404125 MSNP26038 577 aaKnown RBP16.9■□□□□ 0.3
PSME4-202ENST00000404125 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
PSME4-202ENST00000404125 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
PSME4-202ENST00000404125 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
PSME4-202ENST00000404125 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
PSME4-202ENST00000404125 CUX1P39880 1505 aa16.9■□□□□ 0.3
PSME4-202ENST00000404125 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
PSME4-202ENST00000404125 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
PSME4-202ENST00000404125 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
PSME4-202ENST00000404125 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
PSME4-202ENST00000404125 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
PSME4-202ENST00000404125 WWC3Q9ULE0 1092 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 C11orf95C9JLR9 678 aaPredicted RBP16.87■□□□□ 0.29
PSME4-202ENST00000404125 FBLN1P23142 703 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 FBXO31Q5XUX0 539 aaPredicted RBP16.87■□□□□ 0.29
PSME4-202ENST00000404125 SULT6B1Q6IMI4 303 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 E9PSI1 815 aa16.87■□□□□ 0.29
PSME4-202ENST00000404125 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
PSME4-202ENST00000404125 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms