RNA–Protein interactions for RNA: ENST00000403825.7

IFRD1-202, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 2,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-202ENST00000403825 HS1BP3Q53T59 392 aa20.7■□□□□ 0.9
IFRD1-202ENST00000403825 PLCD3Q8N3E9 789 aa20.69■□□□□ 0.9
IFRD1-202ENST00000403825 SLKQ9H2G2 1235 aaPredicted RBP20.69■□□□□ 0.9
IFRD1-202ENST00000403825 CDK11BP21127 795 aaKnown RBP20.69■□□□□ 0.9
IFRD1-202ENST00000403825 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
IFRD1-202ENST00000403825 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
IFRD1-202ENST00000403825 DUSP27Q5VZP5 1158 aa20.67■□□□□ 0.9
IFRD1-202ENST00000403825 NESP48681 1621 aa20.67■□□□□ 0.9
IFRD1-202ENST00000403825 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
IFRD1-202ENST00000403825 GZF1Q9H116 711 aaPredicted RBP20.67■□□□□ 0.9
IFRD1-202ENST00000403825 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
IFRD1-202ENST00000403825 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
IFRD1-202ENST00000403825 VGLL3A8MV65 326 aa20.66■□□□□ 0.9
IFRD1-202ENST00000403825 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
IFRD1-202ENST00000403825 DDX11L8A8MPP1 907 aa20.65■□□□□ 0.9
IFRD1-202ENST00000403825 CSPP1Q1MSJ5 1256 aa20.65■□□□□ 0.9
IFRD1-202ENST00000403825 SECISBP2LQ93073 1101 aaKnown RBP20.65■□□□□ 0.9
IFRD1-202ENST00000403825 EPRSP07814 1512 aaKnown RBP20.64■□□□□ 0.9
IFRD1-202ENST00000403825 ZNF521Q96K83 1311 aa20.64■□□□□ 0.9
IFRD1-202ENST00000403825 ST20-MTHFSA0A0A6YYL1 179 aa20.64■□□□□ 0.89
IFRD1-202ENST00000403825 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
IFRD1-202ENST00000403825 TBC1D32Q96NH3 1257 aa20.62■□□□□ 0.89
IFRD1-202ENST00000403825 IRX3P78415 501 aaPredicted RBP20.62■□□□□ 0.89
IFRD1-202ENST00000403825 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
IFRD1-202ENST00000403825 DNTTIP2Q5QJE6 756 aaKnown RBP20.61■□□□□ 0.89
IFRD1-202ENST00000403825 SEC24BO95487 1268 aa20.61■□□□□ 0.89
IFRD1-202ENST00000403825 RGS22Q8NE09 1264 aa20.61■□□□□ 0.89
IFRD1-202ENST00000403825 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
IFRD1-202ENST00000403825 SASS6Q6UVJ0 657 aa20.6■□□□□ 0.89
IFRD1-202ENST00000403825 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
IFRD1-202ENST00000403825 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
IFRD1-202ENST00000403825 CHMP5Q9NZZ3 219 aa20.6■□□□□ 0.89
IFRD1-202ENST00000403825 BCCIPQ9P287 314 aaKnown RBP eCLIP20.6■□□□□ 0.89
IFRD1-202ENST00000403825 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
IFRD1-202ENST00000403825 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
IFRD1-202ENST00000403825 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
IFRD1-202ENST00000403825 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
IFRD1-202ENST00000403825 SCAPERQ9BY12 1400 aa20.56■□□□□ 0.88
IFRD1-202ENST00000403825 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
IFRD1-202ENST00000403825 DHX37Q8IY37 1157 aaKnown RBP20.56■□□□□ 0.88
IFRD1-202ENST00000403825 ADGRL2O95490 1459 aa20.56■□□□□ 0.88
IFRD1-202ENST00000403825 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
IFRD1-202ENST00000403825 PTMSP20962 102 aa20.56■□□□□ 0.88
IFRD1-202ENST00000403825 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
IFRD1-202ENST00000403825 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
IFRD1-202ENST00000403825 MCM5P33992 734 aa20.55■□□□□ 0.88
IFRD1-202ENST00000403825 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
IFRD1-202ENST00000403825 DNAJC2Q99543 621 aaKnown RBP20.55■□□□□ 0.88
IFRD1-202ENST00000403825 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
IFRD1-202ENST00000403825 KIAA0586Q9BVV6 1533 aa20.54■□□□□ 0.88
IFRD1-202ENST00000403825 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
IFRD1-202ENST00000403825 IGHDP01880 384 aa20.53■□□□□ 0.88
IFRD1-202ENST00000403825 SLFN5Q08AF3 891 aa20.53■□□□□ 0.88
IFRD1-202ENST00000403825 SKOR2Q2VWA4 1001 aaPredicted RBP20.53■□□□□ 0.88
IFRD1-202ENST00000403825 LAMC1P11047 1609 aa20.52■□□□□ 0.88
IFRD1-202ENST00000403825 WDR62O43379 1518 aa20.51■□□□□ 0.87
IFRD1-202ENST00000403825 PKD2Q13563 968 aa20.51■□□□□ 0.87
IFRD1-202ENST00000403825 PDE3AQ14432 1141 aa20.51■□□□□ 0.87
IFRD1-202ENST00000403825 NKTRP30414 1462 aaKnown RBP20.51■□□□□ 0.87
IFRD1-202ENST00000403825 ANKRD30AQ9BXX3 1397 aa20.51■□□□□ 0.87
IFRD1-202ENST00000403825 ADAMTS8Q9UP79 889 aa20.5■□□□□ 0.87
IFRD1-202ENST00000403825 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
IFRD1-202ENST00000403825 MMP14P50281 582 aa20.49■□□□□ 0.87
IFRD1-202ENST00000403825 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
IFRD1-202ENST00000403825 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
IFRD1-202ENST00000403825 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
IFRD1-202ENST00000403825 ARID3AQ99856 593 aa20.48■□□□□ 0.87
IFRD1-202ENST00000403825 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
IFRD1-202ENST00000403825 IBTKQ9P2D0 1353 aaPredicted RBP20.48■□□□□ 0.87
IFRD1-202ENST00000403825 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
IFRD1-202ENST00000403825 GPRASP1Q5JY77 1395 aa20.47■□□□□ 0.87
IFRD1-202ENST00000403825 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
IFRD1-202ENST00000403825 CGNQ9P2M7 1197 aaKnown RBP20.47■□□□□ 0.87
IFRD1-202ENST00000403825 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
IFRD1-202ENST00000403825 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
IFRD1-202ENST00000403825 IRX5P78411 483 aaPredicted RBP20.46■□□□□ 0.87
IFRD1-202ENST00000403825 CROCC2H7BZ55 1655 aa20.46■□□□□ 0.87
IFRD1-202ENST00000403825 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
IFRD1-202ENST00000403825 RTEL1-TNFRSF6BF6WH68 1400 aa20.45■□□□□ 0.86
IFRD1-202ENST00000403825 CAMSAP2Q08AD1 1489 aa20.45■□□□□ 0.86
IFRD1-202ENST00000403825 ZNF692Q9BU19 519 aaPredicted RBP20.44■□□□□ 0.86
IFRD1-202ENST00000403825 CBX1P83916 185 aa20.44■□□□□ 0.86
IFRD1-202ENST00000403825 MYRIPQ8NFW9 859 aa20.44■□□□□ 0.86
IFRD1-202ENST00000403825 DDIT3P35638 169 aa20.43■□□□□ 0.86
IFRD1-202ENST00000403825 NBPF1Q3BBV0 1214 aa20.43■□□□□ 0.86
IFRD1-202ENST00000403825 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
IFRD1-202ENST00000403825 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
IFRD1-202ENST00000403825 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
IFRD1-202ENST00000403825 EIF4G3O43432 1585 aaKnown RBP20.41■□□□□ 0.86
IFRD1-202ENST00000403825 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.86
IFRD1-202ENST00000403825 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
IFRD1-202ENST00000403825 PRDM15P57071 1507 aaPredicted RBP20.41■□□□□ 0.86
IFRD1-202ENST00000403825 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
IFRD1-202ENST00000403825 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
IFRD1-202ENST00000403825 CIZ1Q9ULV3 898 aaPredicted RBP20.41■□□□□ 0.86
IFRD1-202ENST00000403825 ZKSCAN5Q9Y2L8 839 aa20.41■□□□□ 0.86
IFRD1-202ENST00000403825 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
IFRD1-202ENST00000403825 CLGNO14967 610 aa20.4■□□□□ 0.86
IFRD1-202ENST00000403825 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
IFRD1-202ENST00000403825 SAMD1Q6SPF0 538 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms