RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MSH5O43196 834 aa10.17□□□□□ -0.78
CHD8-201ENST00000399982 RRP1P56182 461 aaKnown RBP10.17□□□□□ -0.78
CHD8-201ENST00000399982 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 PDCL3Q9H2J4 239 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 ITPRIPQ8IWB1 547 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 FAM184AQ8NB25 1140 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
CHD8-201ENST00000399982 EPS15P42566 896 aa10.15□□□□□ -0.78
CHD8-201ENST00000399982 NAT10Q9H0A0 1025 aaKnown RBP10.15□□□□□ -0.78
CHD8-201ENST00000399982 FAM107BQ9H098 131 aa10.15□□□□□ -0.78
CHD8-201ENST00000399982 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.79
CHD8-201ENST00000399982 MCTP1Q6DN14 999 aa10.15□□□□□ -0.79
CHD8-201ENST00000399982 CAGE1Q8TC20 777 aa10.15□□□□□ -0.79
CHD8-201ENST00000399982 GOLGA6L7A0A1B0GV03 622 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 TMEM132AQ24JP5 1023 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 CCDC47Q96A33 483 aaKnown RBP10.14□□□□□ -0.79
CHD8-201ENST00000399982 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 MYO6Q9UM54 1294 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
CHD8-201ENST00000399982 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 MORC1Q86VD1 984 aa10.14□□□□□ -0.79
CHD8-201ENST00000399982 WWC2Q6AWC2 1192 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 CALCOCO1Q9P1Z2 691 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 PDIA4P13667 645 aaKnown RBP10.13□□□□□ -0.79
CHD8-201ENST00000399982 CCAR1Q8IX12 1150 aaKnown RBP10.13□□□□□ -0.79
CHD8-201ENST00000399982 FMN1Q68DA7 1419 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 E9PSI1 815 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 EIF3JO75822 258 aaKnown RBP10.13□□□□□ -0.79
CHD8-201ENST00000399982 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
CHD8-201ENST00000399982 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
CHD8-201ENST00000399982 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
CHD8-201ENST00000399982 SRPK2P78362 688 aaKnown RBP10.12□□□□□ -0.79
CHD8-201ENST00000399982 SEPT7Q16181 437 aaKnown RBP10.12□□□□□ -0.79
CHD8-201ENST00000399982 CLASRPQ8N2M8 674 aaKnown RBP10.12□□□□□ -0.79
CHD8-201ENST00000399982 KIF2AO00139 706 aaPredicted RBP10.12□□□□□ -0.79
CHD8-201ENST00000399982 MCM2P49736 904 aa10.12□□□□□ -0.79
CHD8-201ENST00000399982 DYDC1Q8WWB3 177 aa10.11□□□□□ -0.79
CHD8-201ENST00000399982 ANKRD30AQ9BXX3 1397 aa10.11□□□□□ -0.79
CHD8-201ENST00000399982 SYNE3Q6ZMZ3 975 aa10.11□□□□□ -0.79
CHD8-201ENST00000399982 ROCK1Q13464 1354 aa10.11□□□□□ -0.79
CHD8-201ENST00000399982 IFT57Q9NWB7 429 aa10.11□□□□□ -0.79
CHD8-201ENST00000399982 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
CHD8-201ENST00000399982 SAFB2Q14151 953 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHD8-201ENST00000399982 ENOX2Q16206 610 aaKnown RBP10.1□□□□□ -0.79
CHD8-201ENST00000399982 LRRFIP1Q32MZ4 808 aaKnown RBP10.1□□□□□ -0.79
CHD8-201ENST00000399982 ERLIN1O75477 346 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 KANK1Q14678 1352 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 RUFY2Q8WXA3 655 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 KIAA0754O94854 1291 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 TRIM29Q14134 588 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
CHD8-201ENST00000399982 NF2P35240 595 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 SASS6Q6UVJ0 657 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 SMC4Q9NTJ3 1288 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 BAZ1BQ9UIG0 1483 aaKnown RBP10.09□□□□□ -0.79
CHD8-201ENST00000399982 MCM5P33992 734 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 ESPNB1AK53 854 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 TRAK2O60296 914 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 NINLQ9Y2I6 1382 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 WDR70Q9NW82 654 aa10.09□□□□□ -0.79
CHD8-201ENST00000399982 DDX19BQ9UMR2 479 aa10.08□□□□□ -0.8
CHD8-201ENST00000399982 RAB3GAP2Q9H2M9 1393 aa10.08□□□□□ -0.8
CHD8-201ENST00000399982 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
CHD8-201ENST00000399982 STK31Q9BXU1 1019 aa10.07□□□□□ -0.8
CHD8-201ENST00000399982 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
CHD8-201ENST00000399982 TXLNBQ8N3L3 684 aa10.07□□□□□ -0.8
CHD8-201ENST00000399982 ZKSCAN2Q63HK3 967 aa10.07□□□□□ -0.8
CHD8-201ENST00000399982 ZSCAN30Q86W11 494 aa10.07□□□□□ -0.8
CHD8-201ENST00000399982 OFD1O75665 1012 aa10.06□□□□□ -0.8
CHD8-201ENST00000399982 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
CHD8-201ENST00000399982 DCAF8L1A6NGE4 600 aa10.06□□□□□ -0.8
CHD8-201ENST00000399982 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
CHD8-201ENST00000399982 ANKRD18AQ8IVF6 992 aa10.06□□□□□ -0.8
CHD8-201ENST00000399982 MLECQ14165 292 aa10.06□□□□□ -0.8
CHD8-201ENST00000399982 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
CHD8-201ENST00000399982 CCDC112Q8NEF3 446 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 IL27Q8NEV9 243 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 TSPY26PQ9H489 355 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 FOSBP53539 338 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 INTS3Q68E01 1043 aaKnown RBP10.05□□□□□ -0.8
CHD8-201ENST00000399982 PRKRIP1Q9H875 184 aaPredicted RBP10.05□□□□□ -0.8
CHD8-201ENST00000399982 CTR9Q6PD62 1173 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
CHD8-201ENST00000399982 RABEP1Q15276 862 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 DDX11Q96FC9 970 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
CHD8-201ENST00000399982 IQCEQ6IPM2 695 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 C22orf23Q9BZE7 217 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 PDCP20941 246 aa10.04□□□□□ -0.8
CHD8-201ENST00000399982 HDGFL2Q7Z4V5 671 aaPredicted RBP10.04□□□□□ -0.8
CHD8-201ENST00000399982 VPS37DQ86XT2 251 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms