RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 LNPKQ9C0E8 428 aa18.54■□□□□ 0.56
ITSN1-210ENST00000399353 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
ITSN1-210ENST00000399353 PPP2R1AP30153 589 aa18.54■□□□□ 0.56
ITSN1-210ENST00000399353 RIPK4P57078 832 aa18.53■□□□□ 0.56
ITSN1-210ENST00000399353 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
ITSN1-210ENST00000399353 SSFA2P28290 1259 aa18.53■□□□□ 0.56
ITSN1-210ENST00000399353 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.55
ITSN1-210ENST00000399353 SPDYE4A6NLX3 237 aa18.51■□□□□ 0.55
ITSN1-210ENST00000399353 VGLL3A8MV65 326 aa18.49■□□□□ 0.55
ITSN1-210ENST00000399353 PLCD3Q8N3E9 789 aa18.49■□□□□ 0.55
ITSN1-210ENST00000399353 ZNF771Q7L3S4 317 aaPredicted RBP18.48■□□□□ 0.55
ITSN1-210ENST00000399353 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
ITSN1-210ENST00000399353 UNC13AQ9UPW8 1703 aa18.48■□□□□ 0.55
ITSN1-210ENST00000399353 ISY1Q9ULR0 285 aaKnown RBP18.48■□□□□ 0.55
ITSN1-210ENST00000399353 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
ITSN1-210ENST00000399353 PRPF40AO75400 957 aaKnown RBP18.47■□□□□ 0.55
ITSN1-210ENST00000399353 PRDM4Q9UKN5 801 aa18.47■□□□□ 0.55
ITSN1-210ENST00000399353 PDE3AQ14432 1141 aa18.47■□□□□ 0.55
ITSN1-210ENST00000399353 CHMP4BQ9H444 224 aaKnown RBP18.47■□□□□ 0.55
ITSN1-210ENST00000399353 JARID2Q92833 1246 aaPredicted RBP18.47■□□□□ 0.55
ITSN1-210ENST00000399353 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
ITSN1-210ENST00000399353 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
ITSN1-210ENST00000399353 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
ITSN1-210ENST00000399353 APBB1O00213 710 aa18.46■□□□□ 0.55
ITSN1-210ENST00000399353 KIAA2012Q0VF49 1180 aa18.46■□□□□ 0.55
ITSN1-210ENST00000399353 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
ITSN1-210ENST00000399353 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
ITSN1-210ENST00000399353 RBM27Q9P2N5 1060 aaKnown RBP18.45■□□□□ 0.54
ITSN1-210ENST00000399353 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
ITSN1-210ENST00000399353 RLBP1P12271 317 aa18.44■□□□□ 0.54
ITSN1-210ENST00000399353 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
ITSN1-210ENST00000399353 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
ITSN1-210ENST00000399353 CSPP1Q1MSJ5 1256 aa18.43■□□□□ 0.54
ITSN1-210ENST00000399353 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
ITSN1-210ENST00000399353 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
ITSN1-210ENST00000399353 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
ITSN1-210ENST00000399353 ANKRD45Q5TZF3 282 aa18.42■□□□□ 0.54
ITSN1-210ENST00000399353 ZNF830Q96NB3 372 aaPredicted RBP18.42■□□□□ 0.54
ITSN1-210ENST00000399353 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
ITSN1-210ENST00000399353 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
ITSN1-210ENST00000399353 NESP48681 1621 aa18.41■□□□□ 0.54
ITSN1-210ENST00000399353 PTMSP20962 102 aa18.41■□□□□ 0.54
ITSN1-210ENST00000399353 SMAP1Q8IYB5 467 aaPredicted RBP18.4■□□□□ 0.54
ITSN1-210ENST00000399353 SYCE3A1L190 88 aa18.4■□□□□ 0.54
ITSN1-210ENST00000399353 PARD3Q8TEW0 1356 aa18.4■□□□□ 0.54
ITSN1-210ENST00000399353 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
ITSN1-210ENST00000399353 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
ITSN1-210ENST00000399353 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
ITSN1-210ENST00000399353 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
ITSN1-210ENST00000399353 CCDC144AA2RUR9 1427 aa18.38■□□□□ 0.53
ITSN1-210ENST00000399353 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
ITSN1-210ENST00000399353 DZIP1LQ8IYY4 767 aaKnown RBP18.38■□□□□ 0.53
ITSN1-210ENST00000399353 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
ITSN1-210ENST00000399353 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
ITSN1-210ENST00000399353 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
ITSN1-210ENST00000399353 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
ITSN1-210ENST00000399353 ANKRD50Q9ULJ7 1429 aa18.37■□□□□ 0.53
ITSN1-210ENST00000399353 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
ITSN1-210ENST00000399353 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
ITSN1-210ENST00000399353 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
ITSN1-210ENST00000399353 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
ITSN1-210ENST00000399353 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
ITSN1-210ENST00000399353 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
ITSN1-210ENST00000399353 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
ITSN1-210ENST00000399353 CHAF1AQ13111 956 aaPredicted RBP18.36■□□□□ 0.53
ITSN1-210ENST00000399353 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
ITSN1-210ENST00000399353 K7ELQ4 463 aaPredicted RBP18.35■□□□□ 0.53
ITSN1-210ENST00000399353 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
ITSN1-210ENST00000399353 C17orf53Q8N3J3 647 aaPredicted RBP18.34■□□□□ 0.53
ITSN1-210ENST00000399353 RARSP54136 660 aaKnown RBP18.34■□□□□ 0.53
ITSN1-210ENST00000399353 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
ITSN1-210ENST00000399353 NAP1L2Q9ULW6 460 aaPredicted RBP18.34■□□□□ 0.53
ITSN1-210ENST00000399353 KDM6BO15054 1643 aa18.34■□□□□ 0.53
ITSN1-210ENST00000399353 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
ITSN1-210ENST00000399353 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
ITSN1-210ENST00000399353 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.53
ITSN1-210ENST00000399353 DAPK1P53355 1430 aa18.33■□□□□ 0.53
ITSN1-210ENST00000399353 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.53
ITSN1-210ENST00000399353 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.53
ITSN1-210ENST00000399353 ZKSCAN5Q9Y2L8 839 aa18.33■□□□□ 0.52
ITSN1-210ENST00000399353 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.52
ITSN1-210ENST00000399353 TCP11L2Q8N4U5 519 aa18.32■□□□□ 0.52
ITSN1-210ENST00000399353 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
ITSN1-210ENST00000399353 TRERF1Q96PN7 1200 aa18.32■□□□□ 0.52
ITSN1-210ENST00000399353 C1orf115Q9H7X2 142 aa18.32■□□□□ 0.52
ITSN1-210ENST00000399353 SUPT6HQ7KZ85 1726 aaKnown RBP18.32■□□□□ 0.52
ITSN1-210ENST00000399353 RAB3GAP1Q15042 981 aa18.31■□□□□ 0.52
ITSN1-210ENST00000399353 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
ITSN1-210ENST00000399353 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
ITSN1-210ENST00000399353 NKTRP30414 1462 aaKnown RBP18.31■□□□□ 0.52
ITSN1-210ENST00000399353 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
ITSN1-210ENST00000399353 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
ITSN1-210ENST00000399353 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
ITSN1-210ENST00000399353 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
ITSN1-210ENST00000399353 CD2BP2O95400 341 aaKnown RBP18.29■□□□□ 0.52
ITSN1-210ENST00000399353 PPP1R9BQ96SB3 815 aa18.29■□□□□ 0.52
ITSN1-210ENST00000399353 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
ITSN1-210ENST00000399353 ZBTB22O15209 634 aa18.28■□□□□ 0.52
ITSN1-210ENST00000399353 MVPQ14764 893 aaKnown RBP18.28■□□□□ 0.52
ITSN1-210ENST00000399353 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms