RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
RAB1A-201ENST00000398529 NOS1P29475 1434 aa22.16■■□□□ 1.14
RAB1A-201ENST00000398529 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
RAB1A-201ENST00000398529 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
RAB1A-201ENST00000398529 RPRD2Q5VT52 1461 aaKnown RBP22.14■■□□□ 1.13
RAB1A-201ENST00000398529 C14orf37Q86TY3 774 aa22.13■■□□□ 1.13
RAB1A-201ENST00000398529 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
RAB1A-201ENST00000398529 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
RAB1A-201ENST00000398529 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
RAB1A-201ENST00000398529 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.1■■□□□ 1.13
RAB1A-201ENST00000398529 ANKRD50Q9ULJ7 1429 aa22.1■■□□□ 1.13
RAB1A-201ENST00000398529 JCADQ9P266 1359 aa22.1■■□□□ 1.13
RAB1A-201ENST00000398529 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
RAB1A-201ENST00000398529 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
RAB1A-201ENST00000398529 CHD2O14647 1828 aaKnown RBP22.09■■□□□ 1.13
RAB1A-201ENST00000398529 CHGAP10645 457 aaKnown RBP22.09■■□□□ 1.13
RAB1A-201ENST00000398529 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
RAB1A-201ENST00000398529 RIMS2Q9UQ26 1411 aa22.07■■□□□ 1.12
RAB1A-201ENST00000398529 TBX22Q9Y458 520 aa22.06■■□□□ 1.12
RAB1A-201ENST00000398529 GCC2Q8IWJ2 1684 aa22.06■■□□□ 1.12
RAB1A-201ENST00000398529 MEX3CQ5U5Q3 659 aaKnown RBP22.05■■□□□ 1.12
RAB1A-201ENST00000398529 ATF3P18847 181 aa22.04■■□□□ 1.12
RAB1A-201ENST00000398529 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
RAB1A-201ENST00000398529 NCOA3Q9Y6Q9 1424 aa22.04■■□□□ 1.12
RAB1A-201ENST00000398529 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
RAB1A-201ENST00000398529 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.11
RAB1A-201ENST00000398529 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
RAB1A-201ENST00000398529 SPATA31A6Q5VVP1 1343 aa22■■□□□ 1.11
RAB1A-201ENST00000398529 ZNF772Q68DY9 489 aaPredicted RBP21.98■■□□□ 1.11
RAB1A-201ENST00000398529 NUTM2DQ5VT03 806 aaPredicted RBP21.97■■□□□ 1.11
RAB1A-201ENST00000398529 PIK3R4Q99570 1358 aa21.97■■□□□ 1.11
RAB1A-201ENST00000398529 DIP2AQ14689 1571 aa21.96■■□□□ 1.11
RAB1A-201ENST00000398529 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
RAB1A-201ENST00000398529 UNC13BO14795 1591 aa21.95■■□□□ 1.1
RAB1A-201ENST00000398529 SETD1AO15047 1707 aaKnown RBP21.94■■□□□ 1.1
RAB1A-201ENST00000398529 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
RAB1A-201ENST00000398529 E9PCH4 1651 aa21.92■■□□□ 1.1
RAB1A-201ENST00000398529 TRPM2O94759 1503 aa21.91■■□□□ 1.1
RAB1A-201ENST00000398529 AMOTL2Q9Y2J4 779 aa21.91■■□□□ 1.1
RAB1A-201ENST00000398529 ADAMTS13Q76LX8 1427 aa21.9■■□□□ 1.1
RAB1A-201ENST00000398529 AHDC1Q5TGY3 1603 aaPredicted RBP21.89■■□□□ 1.09
RAB1A-201ENST00000398529 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
RAB1A-201ENST00000398529 SHPRHQ149N8 1683 aa21.88■■□□□ 1.09
RAB1A-201ENST00000398529 NUP155O75694 1391 aa21.88■■□□□ 1.09
RAB1A-201ENST00000398529 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
RAB1A-201ENST00000398529 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
RAB1A-201ENST00000398529 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
RAB1A-201ENST00000398529 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
RAB1A-201ENST00000398529 RXRBP28702 533 aa21.87■■□□□ 1.09
RAB1A-201ENST00000398529 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
RAB1A-201ENST00000398529 LRP6O75581 1613 aa21.85■■□□□ 1.09
RAB1A-201ENST00000398529 ZNF326Q5BKZ1 582 aaKnown RBP21.85■■□□□ 1.09
RAB1A-201ENST00000398529 BRINP3Q76B58 766 aa21.85■■□□□ 1.09
RAB1A-201ENST00000398529 ITGAEP38570 1179 aa21.83■■□□□ 1.09
RAB1A-201ENST00000398529 DCCP43146 1447 aa21.82■■□□□ 1.08
RAB1A-201ENST00000398529 UPF1Q92900 1129 aaKnown RBP eCLIP21.81■■□□□ 1.082e-32■■■■□ 19.8
RAB1A-201ENST00000398529 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
RAB1A-201ENST00000398529 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
RAB1A-201ENST00000398529 ASXL1Q8IXJ9 1541 aa21.77■■□□□ 1.08
RAB1A-201ENST00000398529 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
RAB1A-201ENST00000398529 AFF2P51816 1311 aa21.76■■□□□ 1.07
RAB1A-201ENST00000398529 SETBP1Q9Y6X0 1596 aa21.75■■□□□ 1.07
RAB1A-201ENST00000398529 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
RAB1A-201ENST00000398529 SETD5Q9C0A6 1442 aa21.74■■□□□ 1.07
RAB1A-201ENST00000398529 CDK12Q9NYV4 1490 aaPredicted RBP21.74■■□□□ 1.07
RAB1A-201ENST00000398529 MST1RQ04912 1400 aa21.72■■□□□ 1.07
RAB1A-201ENST00000398529 C8orf37Q96NL8 207 aa21.72■■□□□ 1.07
RAB1A-201ENST00000398529 NHSL1Q5SYE7 1610 aa21.72■■□□□ 1.07
RAB1A-201ENST00000398529 NRXN3Q9Y4C0 1643 aa21.71■■□□□ 1.07
RAB1A-201ENST00000398529 QTRT2Q9H974 415 aaKnown RBP21.7■■□□□ 1.06
RAB1A-201ENST00000398529 METP08581 1390 aa21.7■■□□□ 1.06
RAB1A-201ENST00000398529 RBM6P78332 1123 aaKnown RBP21.69■■□□□ 1.06
RAB1A-201ENST00000398529 ADGRL3Q9HAR2 1447 aa21.69■■□□□ 1.06
RAB1A-201ENST00000398529 NGLY1Q96IV0 654 aa21.68■■□□□ 1.06
RAB1A-201ENST00000398529 KIF1BO60333 1816 aa21.68■■□□□ 1.06
RAB1A-201ENST00000398529 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.06
RAB1A-201ENST00000398529 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
RAB1A-201ENST00000398529 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
RAB1A-201ENST00000398529 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.05
RAB1A-201ENST00000398529 NALCNQ8IZF0 1738 aa21.63■■□□□ 1.05
RAB1A-201ENST00000398529 FOXD1Q16676 465 aa21.62■■□□□ 1.05
RAB1A-201ENST00000398529 NEXMIFQ5QGS0 1516 aa21.61■■□□□ 1.05
RAB1A-201ENST00000398529 CLTCL1P53675 1640 aa21.61■■□□□ 1.05
RAB1A-201ENST00000398529 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
RAB1A-201ENST00000398529 C1orf167Q5SNV9 1468 aa21.59■■□□□ 1.05
RAB1A-201ENST00000398529 RGS12O14924 1447 aa21.58■■□□□ 1.05
RAB1A-201ENST00000398529 USP21Q9UK80 565 aa21.58■■□□□ 1.05
RAB1A-201ENST00000398529 PTCH1Q13635 1447 aa21.56■■□□□ 1.04
RAB1A-201ENST00000398529 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
RAB1A-201ENST00000398529 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
RAB1A-201ENST00000398529 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
RAB1A-201ENST00000398529 ORAI2Q96SN7 254 aa21.55■■□□□ 1.04
RAB1A-201ENST00000398529 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
RAB1A-201ENST00000398529 LAMC1P11047 1609 aa21.53■■□□□ 1.04
RAB1A-201ENST00000398529 ROBO2Q9HCK4 1378 aa21.52■■□□□ 1.04
RAB1A-201ENST00000398529 HFM1A2PYH4 1435 aa21.52■■□□□ 1.04
RAB1A-201ENST00000398529 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
RAB1A-201ENST00000398529 NPHP3Q7Z494 1330 aa21.5■■□□□ 1.03
RAB1A-201ENST00000398529 FNBP4Q8N3X1 1017 aaPredicted RBP21.49■■□□□ 1.03
RAB1A-201ENST00000398529 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms