RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 FGD6Q6ZV73 1430 aa23.53■■□□□ 1.36
SEC13-206ENST00000397102 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
SEC13-206ENST00000397102 SLAIN2Q9P270 581 aa23.52■■□□□ 1.36
SEC13-206ENST00000397102 MYO5BQ9ULV0 1848 aa23.51■■□□□ 1.35
SEC13-206ENST00000397102 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
SEC13-206ENST00000397102 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
SEC13-206ENST00000397102 BCANQ96GW7 911 aa23.5■■□□□ 1.35
SEC13-206ENST00000397102 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
SEC13-206ENST00000397102 COL16A1Q07092 1604 aaPredicted RBP23.5■■□□□ 1.35
SEC13-206ENST00000397102 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
SEC13-206ENST00000397102 PLEKHG1Q9ULL1 1385 aa23.49■■□□□ 1.35
SEC13-206ENST00000397102 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
SEC13-206ENST00000397102 ADGRL2O95490 1459 aa23.47■■□□□ 1.35
SEC13-206ENST00000397102 NCOA3Q9Y6Q9 1424 aa23.45■■□□□ 1.34
SEC13-206ENST00000397102 APLP2Q06481 763 aa23.45■■□□□ 1.34
SEC13-206ENST00000397102 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
SEC13-206ENST00000397102 RIMS2Q9UQ26 1411 aa23.44■■□□□ 1.34
SEC13-206ENST00000397102 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
SEC13-206ENST00000397102 LRP6O75581 1613 aa23.42■■□□□ 1.34
SEC13-206ENST00000397102 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
SEC13-206ENST00000397102 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
SEC13-206ENST00000397102 TBX22Q9Y458 520 aa23.4■■□□□ 1.34
SEC13-206ENST00000397102 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
SEC13-206ENST00000397102 AHDC1Q5TGY3 1603 aaPredicted RBP23.4■■□□□ 1.34
SEC13-206ENST00000397102 ANKRD50Q9ULJ7 1429 aa23.39■■□□□ 1.33
SEC13-206ENST00000397102 DIP2AQ14689 1571 aa23.39■■□□□ 1.33
SEC13-206ENST00000397102 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.33
SEC13-206ENST00000397102 ZNF772Q68DY9 489 aaPredicted RBP23.36■■□□□ 1.33
SEC13-206ENST00000397102 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
SEC13-206ENST00000397102 MEX3CQ5U5Q3 659 aaKnown RBP23.35■■□□□ 1.33
SEC13-206ENST00000397102 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
SEC13-206ENST00000397102 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
SEC13-206ENST00000397102 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
SEC13-206ENST00000397102 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
SEC13-206ENST00000397102 UNC13BO14795 1591 aa23.33■■□□□ 1.33
SEC13-206ENST00000397102 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
SEC13-206ENST00000397102 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
SEC13-206ENST00000397102 ATF3P18847 181 aa23.31■■□□□ 1.32
SEC13-206ENST00000397102 E9PCH4 1651 aa23.31■■□□□ 1.32
SEC13-206ENST00000397102 TRPM2O94759 1503 aa23.29■■□□□ 1.32
SEC13-206ENST00000397102 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
SEC13-206ENST00000397102 TRIM52Q96A61 297 aa23.29■■□□□ 1.32
SEC13-206ENST00000397102 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
SEC13-206ENST00000397102 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
SEC13-206ENST00000397102 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
SEC13-206ENST00000397102 DCCP43146 1447 aa23.25■■□□□ 1.31
SEC13-206ENST00000397102 IQGAP3Q86VI3 1631 aa23.24■■□□□ 1.31
SEC13-206ENST00000397102 RXRBP28702 533 aa23.24■■□□□ 1.31
SEC13-206ENST00000397102 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
SEC13-206ENST00000397102 PTPRUQ92729 1446 aa23.23■■□□□ 1.31
SEC13-206ENST00000397102 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
SEC13-206ENST00000397102 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
SEC13-206ENST00000397102 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
SEC13-206ENST00000397102 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
SEC13-206ENST00000397102 SETD5Q9C0A6 1442 aa23.2■■□□□ 1.3
SEC13-206ENST00000397102 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
SEC13-206ENST00000397102 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
SEC13-206ENST00000397102 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
SEC13-206ENST00000397102 NRXN3Q9Y4C0 1643 aa23.19■■□□□ 1.3
SEC13-206ENST00000397102 MST1RQ04912 1400 aa23.17■■□□□ 1.3
SEC13-206ENST00000397102 AFF2P51816 1311 aa23.17■■□□□ 1.3
SEC13-206ENST00000397102 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
SEC13-206ENST00000397102 ROCK1Q13464 1354 aa23.14■■□□□ 1.3
SEC13-206ENST00000397102 LRRC59Q96AG4 307 aaKnown RBP23.12■■□□□ 1.29
SEC13-206ENST00000397102 NUP155O75694 1391 aa23.11■■□□□ 1.29
SEC13-206ENST00000397102 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
SEC13-206ENST00000397102 RGS12O14924 1447 aa23.1■■□□□ 1.29
SEC13-206ENST00000397102 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.29
SEC13-206ENST00000397102 NALCNQ8IZF0 1738 aa23.08■■□□□ 1.29
SEC13-206ENST00000397102 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
SEC13-206ENST00000397102 RBM6P78332 1123 aaKnown RBP23.07■■□□□ 1.28
SEC13-206ENST00000397102 C8orf37Q96NL8 207 aa23.07■■□□□ 1.28
SEC13-206ENST00000397102 METP08581 1390 aa23.06■■□□□ 1.28
SEC13-206ENST00000397102 QTRT2Q9H974 415 aaKnown RBP23.06■■□□□ 1.28
SEC13-206ENST00000397102 LAMC1P11047 1609 aa23.03■■□□□ 1.28
SEC13-206ENST00000397102 ZNF326Q5BKZ1 582 aaKnown RBP23.02■■□□□ 1.28
SEC13-206ENST00000397102 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.28
SEC13-206ENST00000397102 NEXMIFQ5QGS0 1516 aa23.01■■□□□ 1.27
SEC13-206ENST00000397102 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
SEC13-206ENST00000397102 NGLY1Q96IV0 654 aa22.98■■□□□ 1.27
SEC13-206ENST00000397102 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
SEC13-206ENST00000397102 KIF1BO60333 1816 aa22.95■■□□□ 1.26
SEC13-206ENST00000397102 ADAMTS2O95450 1211 aa22.95■■□□□ 1.26
SEC13-206ENST00000397102 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
SEC13-206ENST00000397102 ATAD2Q6PL18 1390 aa22.95■■□□□ 1.26
SEC13-206ENST00000397102 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
SEC13-206ENST00000397102 COL22A1Q8NFW1 1626 aaPredicted RBP22.92■■□□□ 1.26
SEC13-206ENST00000397102 ITGAEP38570 1179 aa22.91■■□□□ 1.26
SEC13-206ENST00000397102 USP21Q9UK80 565 aa22.91■■□□□ 1.26
SEC13-206ENST00000397102 TRPC5Q9UL62 973 aaPredicted RBP22.9■■□□□ 1.26
SEC13-206ENST00000397102 PRAG1Q86YV5 1406 aa22.9■■□□□ 1.26
SEC13-206ENST00000397102 FNBP4Q8N3X1 1017 aaPredicted RBP22.88■■□□□ 1.25
SEC13-206ENST00000397102 ORAI2Q96SN7 254 aa22.88■■□□□ 1.25
SEC13-206ENST00000397102 ATRNO75882 1429 aa22.88■■□□□ 1.25
SEC13-206ENST00000397102 ROBO2Q9HCK4 1378 aa22.88■■□□□ 1.25
SEC13-206ENST00000397102 FOXD1Q16676 465 aa22.86■■□□□ 1.25
SEC13-206ENST00000397102 MARF1Q9Y4F3 1742 aaKnown RBP22.85■■□□□ 1.25
SEC13-206ENST00000397102 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
SEC13-206ENST00000397102 MYOM2P54296 1465 aa22.83■■□□□ 1.25
SEC13-206ENST00000397102 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms