RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 RPRD2Q5VT52 1461 aaKnown RBP21.17■□□□□ 0.98
SEC13-205ENST00000397101 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
SEC13-205ENST00000397101 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
SEC13-205ENST00000397101 ZFYVE9O95405 1425 aa21.14■□□□□ 0.98
SEC13-205ENST00000397101 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.97
SEC13-205ENST00000397101 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.97
SEC13-205ENST00000397101 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
SEC13-205ENST00000397101 PHLPP1O60346 1717 aa21.11■□□□□ 0.97
SEC13-205ENST00000397101 SPATA31A6Q5VVP1 1343 aa21.1■□□□□ 0.97
SEC13-205ENST00000397101 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
SEC13-205ENST00000397101 CHD2O14647 1828 aaKnown RBP21.09■□□□□ 0.97
SEC13-205ENST00000397101 APLP2Q06481 763 aa21.09■□□□□ 0.97
SEC13-205ENST00000397101 BCANQ96GW7 911 aa21.09■□□□□ 0.97
SEC13-205ENST00000397101 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.97
SEC13-205ENST00000397101 CHIC2Q9UKJ5 165 aa21.08■□□□□ 0.97
SEC13-205ENST00000397101 RIMS2Q9UQ26 1411 aa21.06■□□□□ 0.96
SEC13-205ENST00000397101 PIK3R4Q99570 1358 aa21.06■□□□□ 0.96
SEC13-205ENST00000397101 ZNF772Q68DY9 489 aaPredicted RBP21.05■□□□□ 0.96
SEC13-205ENST00000397101 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.05■□□□□ 0.96
SEC13-205ENST00000397101 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
SEC13-205ENST00000397101 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
SEC13-205ENST00000397101 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
SEC13-205ENST00000397101 TMEM131LA2VDJ0 1609 aa21.03■□□□□ 0.96
SEC13-205ENST00000397101 AHDC1Q5TGY3 1603 aaPredicted RBP21.03■□□□□ 0.96
SEC13-205ENST00000397101 SETD1AO15047 1707 aaKnown RBP21.02■□□□□ 0.96
SEC13-205ENST00000397101 C19orf44Q9H6X5 657 aa21.02■□□□□ 0.96
SEC13-205ENST00000397101 DIP2AQ14689 1571 aa21.02■□□□□ 0.95
SEC13-205ENST00000397101 LRP6O75581 1613 aa21.01■□□□□ 0.95
SEC13-205ENST00000397101 ADAMTS13Q76LX8 1427 aa21.01■□□□□ 0.95
SEC13-205ENST00000397101 UPF1Q92900 1129 aaKnown RBP eCLIP21■□□□□ 0.95
SEC13-205ENST00000397101 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
SEC13-205ENST00000397101 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
SEC13-205ENST00000397101 ATF3P18847 181 aa20.97■□□□□ 0.95
SEC13-205ENST00000397101 MEX3CQ5U5Q3 659 aaKnown RBP20.97■□□□□ 0.95
SEC13-205ENST00000397101 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
SEC13-205ENST00000397101 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
SEC13-205ENST00000397101 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.95■□□□□ 0.94
SEC13-205ENST00000397101 CDK12Q9NYV4 1490 aaPredicted RBP20.95■□□□□ 0.94
SEC13-205ENST00000397101 DCCP43146 1447 aa20.95■□□□□ 0.94
SEC13-205ENST00000397101 UNC13BO14795 1591 aa20.93■□□□□ 0.94
SEC13-205ENST00000397101 RXRBP28702 533 aa20.92■□□□□ 0.94
SEC13-205ENST00000397101 TRPM2O94759 1503 aa20.91■□□□□ 0.94
SEC13-205ENST00000397101 BRINP3Q76B58 766 aa20.91■□□□□ 0.94
SEC13-205ENST00000397101 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
SEC13-205ENST00000397101 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
SEC13-205ENST00000397101 AMOTL2Q9Y2J4 779 aa20.9■□□□□ 0.94
SEC13-205ENST00000397101 CHGAP10645 457 aaKnown RBP20.89■□□□□ 0.93
SEC13-205ENST00000397101 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
SEC13-205ENST00000397101 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
SEC13-205ENST00000397101 E9PCH4 1651 aa20.87■□□□□ 0.93
SEC13-205ENST00000397101 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
SEC13-205ENST00000397101 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
SEC13-205ENST00000397101 IQGAP3Q86VI3 1631 aa20.85■□□□□ 0.93
SEC13-205ENST00000397101 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
SEC13-205ENST00000397101 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
SEC13-205ENST00000397101 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
SEC13-205ENST00000397101 LRRC59Q96AG4 307 aaKnown RBP20.83■□□□□ 0.93
SEC13-205ENST00000397101 MST1RQ04912 1400 aa20.83■□□□□ 0.93
SEC13-205ENST00000397101 AFF2P51816 1311 aa20.82■□□□□ 0.92
SEC13-205ENST00000397101 SETBP1Q9Y6X0 1596 aa20.82■□□□□ 0.92
SEC13-205ENST00000397101 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
SEC13-205ENST00000397101 NHSL1Q5SYE7 1610 aa20.81■□□□□ 0.92
SEC13-205ENST00000397101 NUTM2BA6NNL0 878 aaPredicted RBP20.8■□□□□ 0.92
SEC13-205ENST00000397101 NUTM2EB1AL46 878 aaPredicted RBP20.8■□□□□ 0.92
SEC13-205ENST00000397101 NUTM2AQ8IVF1 878 aaPredicted RBP20.8■□□□□ 0.92
SEC13-205ENST00000397101 NRXN3Q9Y4C0 1643 aa20.78■□□□□ 0.92
SEC13-205ENST00000397101 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
SEC13-205ENST00000397101 NUP155O75694 1391 aa20.77■□□□□ 0.92
SEC13-205ENST00000397101 ADGRL3Q9HAR2 1447 aa20.76■□□□□ 0.91
SEC13-205ENST00000397101 PNPLA6Q8IY17 1366 aa20.75■□□□□ 0.91
SEC13-205ENST00000397101 RGS12O14924 1447 aa20.75■□□□□ 0.91
SEC13-205ENST00000397101 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
SEC13-205ENST00000397101 METP08581 1390 aa20.73■□□□□ 0.91
SEC13-205ENST00000397101 C8orf37Q96NL8 207 aa20.72■□□□□ 0.91
SEC13-205ENST00000397101 NGLY1Q96IV0 654 aa20.7■□□□□ 0.9
SEC13-205ENST00000397101 LAMC1P11047 1609 aa20.7■□□□□ 0.9
SEC13-205ENST00000397101 C1orf167Q5SNV9 1468 aa20.68■□□□□ 0.9
SEC13-205ENST00000397101 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
SEC13-205ENST00000397101 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
SEC13-205ENST00000397101 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
SEC13-205ENST00000397101 ATAD2Q6PL18 1390 aa20.66■□□□□ 0.9
SEC13-205ENST00000397101 PTCH1Q13635 1447 aa20.66■□□□□ 0.9
SEC13-205ENST00000397101 PRAG1Q86YV5 1406 aa20.66■□□□□ 0.9
SEC13-205ENST00000397101 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
SEC13-205ENST00000397101 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
SEC13-205ENST00000397101 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
SEC13-205ENST00000397101 FNBP4Q8N3X1 1017 aaPredicted RBP20.64■□□□□ 0.89
SEC13-205ENST00000397101 FOXD1Q16676 465 aa20.63■□□□□ 0.89
SEC13-205ENST00000397101 TRPC5Q9UL62 973 aaPredicted RBP20.63■□□□□ 0.89
SEC13-205ENST00000397101 EP400Q96L91 3159 aa20.62■□□□□ 0.89
SEC13-205ENST00000397101 ADAMTS2O95450 1211 aa20.61■□□□□ 0.89
SEC13-205ENST00000397101 USP21Q9UK80 565 aa20.61■□□□□ 0.89
SEC13-205ENST00000397101 VGFO15240 615 aaPredicted RBP20.58■□□□□ 0.89
SEC13-205ENST00000397101 ATRNO75882 1429 aa20.58■□□□□ 0.88
SEC13-205ENST00000397101 CLTCL1P53675 1640 aa20.57■□□□□ 0.88
SEC13-205ENST00000397101 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
SEC13-205ENST00000397101 ORAI2Q96SN7 254 aa20.57■□□□□ 0.88
SEC13-205ENST00000397101 ROBO2Q9HCK4 1378 aa20.57■□□□□ 0.88
SEC13-205ENST00000397101 COL22A1Q8NFW1 1626 aaPredicted RBP20.56■□□□□ 0.88
SEC13-205ENST00000397101 HFM1A2PYH4 1435 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms