RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 BCANQ96GW7 911 aa20.94■□□□□ 0.94
SEC13-204ENST00000397099 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.93■□□□□ 0.94
SEC13-204ENST00000397099 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
SEC13-204ENST00000397099 HSPA1LP34931 641 aa20.92■□□□□ 0.94
SEC13-204ENST00000397099 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
SEC13-204ENST00000397099 SLC26A8Q96RN1 970 aa20.9■□□□□ 0.94
SEC13-204ENST00000397099 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SEC13-204ENST00000397099 ZFYVE9O95405 1425 aa20.89■□□□□ 0.94
SEC13-204ENST00000397099 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
SEC13-204ENST00000397099 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
SEC13-204ENST00000397099 TRIM52Q96A61 297 aa20.88■□□□□ 0.93
SEC13-204ENST00000397099 PLEKHG1Q9ULL1 1385 aa20.87■□□□□ 0.93
SEC13-204ENST00000397099 TRPM2O94759 1503 aa20.87■□□□□ 0.93
SEC13-204ENST00000397099 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
SEC13-204ENST00000397099 ALKQ9UM73 1620 aa20.85■□□□□ 0.93
SEC13-204ENST00000397099 KCNA6P17658 529 aa20.84■□□□□ 0.93
SEC13-204ENST00000397099 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
SEC13-204ENST00000397099 DIP2AQ14689 1571 aa20.82■□□□□ 0.92
SEC13-204ENST00000397099 KIF1BO60333 1816 aa20.82■□□□□ 0.92
SEC13-204ENST00000397099 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
SEC13-204ENST00000397099 TMEM94Q12767 1356 aa20.8■□□□□ 0.92
SEC13-204ENST00000397099 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
SEC13-204ENST00000397099 TBX22Q9Y458 520 aa20.79■□□□□ 0.92
SEC13-204ENST00000397099 NKTRP30414 1462 aaKnown RBP20.79■□□□□ 0.92
SEC13-204ENST00000397099 NWD1Q149M9 1564 aa20.78■□□□□ 0.92
SEC13-204ENST00000397099 PIK3R4Q99570 1358 aa20.78■□□□□ 0.92
SEC13-204ENST00000397099 RBM33Q96EV2 1170 aaKnown RBP20.78■□□□□ 0.92
SEC13-204ENST00000397099 CHD2O14647 1828 aaKnown RBP20.77■□□□□ 0.92
SEC13-204ENST00000397099 XIRP1Q702N8 1843 aaKnown RBP20.77■□□□□ 0.92
SEC13-204ENST00000397099 CLTCL1P53675 1640 aa20.77■□□□□ 0.92
SEC13-204ENST00000397099 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.91
SEC13-204ENST00000397099 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
SEC13-204ENST00000397099 MED1Q15648 1581 aaPredicted RBP20.74■□□□□ 0.91
SEC13-204ENST00000397099 RPGRIP1LQ68CZ1 1315 aa20.72■□□□□ 0.91
SEC13-204ENST00000397099 SETBP1Q9Y6X0 1596 aa20.72■□□□□ 0.91
SEC13-204ENST00000397099 SOCS7O14512 581 aa20.71■□□□□ 0.91
SEC13-204ENST00000397099 MPHOSPH9Q99550 1183 aa20.71■□□□□ 0.91
SEC13-204ENST00000397099 MSH6P52701 1360 aa20.71■□□□□ 0.91
SEC13-204ENST00000397099 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
SEC13-204ENST00000397099 NCOA3Q9Y6Q9 1424 aa20.7■□□□□ 0.9
SEC13-204ENST00000397099 NEXMIFQ5QGS0 1516 aa20.69■□□□□ 0.9
SEC13-204ENST00000397099 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
SEC13-204ENST00000397099 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
SEC13-204ENST00000397099 HRCP23327 699 aa20.68■□□□□ 0.9
SEC13-204ENST00000397099 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
SEC13-204ENST00000397099 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
SEC13-204ENST00000397099 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
SEC13-204ENST00000397099 RAB3GAP2Q9H2M9 1393 aa20.64■□□□□ 0.89
SEC13-204ENST00000397099 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.89
SEC13-204ENST00000397099 ROBO1Q9Y6N7 1651 aa20.63■□□□□ 0.89
SEC13-204ENST00000397099 SLAIN2Q9P270 581 aa20.62■□□□□ 0.89
SEC13-204ENST00000397099 PPLO60437 1756 aa20.62■□□□□ 0.89
SEC13-204ENST00000397099 AMOTL2Q9Y2J4 779 aa20.61■□□□□ 0.89
SEC13-204ENST00000397099 FOXD1Q16676 465 aa20.59■□□□□ 0.89
SEC13-204ENST00000397099 XRN1Q8IZH2 1706 aaKnown RBP20.58■□□□□ 0.89
SEC13-204ENST00000397099 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
SEC13-204ENST00000397099 ATF3P18847 181 aa20.57■□□□□ 0.88
SEC13-204ENST00000397099 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
SEC13-204ENST00000397099 PTPRUQ92729 1446 aa20.56■□□□□ 0.88
SEC13-204ENST00000397099 C19orf44Q9H6X5 657 aa20.56■□□□□ 0.88
SEC13-204ENST00000397099 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
SEC13-204ENST00000397099 IFT172Q9UG01 1749 aa20.54■□□□□ 0.88
SEC13-204ENST00000397099 DCCP43146 1447 aa20.53■□□□□ 0.88
SEC13-204ENST00000397099 METP08581 1390 aa20.53■□□□□ 0.88
SEC13-204ENST00000397099 SETD1AO15047 1707 aaKnown RBP20.52■□□□□ 0.88
SEC13-204ENST00000397099 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.52■□□□□ 0.88
SEC13-204ENST00000397099 PRAG1Q86YV5 1406 aa20.52■□□□□ 0.87
SEC13-204ENST00000397099 PHLPP1O60346 1717 aa20.51■□□□□ 0.87
SEC13-204ENST00000397099 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
SEC13-204ENST00000397099 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
SEC13-204ENST00000397099 JCADQ9P266 1359 aa20.46■□□□□ 0.87
SEC13-204ENST00000397099 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
SEC13-204ENST00000397099 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
SEC13-204ENST00000397099 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
SEC13-204ENST00000397099 MYOM2P54296 1465 aa20.43■□□□□ 0.86
SEC13-204ENST00000397099 LAMC1P11047 1609 aa20.43■□□□□ 0.86
SEC13-204ENST00000397099 RGS17Q9UGC6 210 aaPredicted RBP20.43■□□□□ 0.86
SEC13-204ENST00000397099 ADGRF5Q8IZF2 1346 aa20.43■□□□□ 0.86
SEC13-204ENST00000397099 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
SEC13-204ENST00000397099 COL16A1Q07092 1604 aaPredicted RBP20.42■□□□□ 0.86
SEC13-204ENST00000397099 AHDC1Q5TGY3 1603 aaPredicted RBP20.4■□□□□ 0.86
SEC13-204ENST00000397099 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
SEC13-204ENST00000397099 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.86
SEC13-204ENST00000397099 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.85
SEC13-204ENST00000397099 TECPR2O15040 1411 aa20.38■□□□□ 0.85
SEC13-204ENST00000397099 MST1RQ04912 1400 aa20.38■□□□□ 0.85
SEC13-204ENST00000397099 MEX3CQ5U5Q3 659 aaKnown RBP20.38■□□□□ 0.85
SEC13-204ENST00000397099 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
SEC13-204ENST00000397099 ROBO2Q9HCK4 1378 aa20.37■□□□□ 0.85
SEC13-204ENST00000397099 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
SEC13-204ENST00000397099 ABCC11Q96J66 1382 aa20.36■□□□□ 0.85
SEC13-204ENST00000397099 SPATA31A6Q5VVP1 1343 aa20.36■□□□□ 0.85
SEC13-204ENST00000397099 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
SEC13-204ENST00000397099 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
SEC13-204ENST00000397099 SIRT1Q96EB6 747 aa20.35■□□□□ 0.85
SEC13-204ENST00000397099 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
SEC13-204ENST00000397099 NUTM2BA6NNL0 878 aaPredicted RBP20.32■□□□□ 0.84
SEC13-204ENST00000397099 NUTM2EB1AL46 878 aaPredicted RBP20.32■□□□□ 0.84
SEC13-204ENST00000397099 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
SEC13-204ENST00000397099 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms