RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 CFAP70Q5T0N1 1121 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 TRAK2O60296 914 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 STK31Q9BXU1 1019 aa19.61■□□□□ 0.73
ATP2A3-205ENST00000397041 ANKRD30BQ9BXX2 1392 aa19.6■□□□□ 0.73
ATP2A3-205ENST00000397041 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
ATP2A3-205ENST00000397041 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
ATP2A3-205ENST00000397041 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
ATP2A3-205ENST00000397041 AMER1Q5JTC6 1135 aaPredicted RBP19.59■□□□□ 0.73
ATP2A3-205ENST00000397041 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.73
ATP2A3-205ENST00000397041 EFCAB5A4FU69 1503 aa19.58■□□□□ 0.73
ATP2A3-205ENST00000397041 RILPL2Q969X0 211 aa19.58■□□□□ 0.73
ATP2A3-205ENST00000397041 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
ATP2A3-205ENST00000397041 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
ATP2A3-205ENST00000397041 NCOA1Q15788 1441 aa19.58■□□□□ 0.72
ATP2A3-205ENST00000397041 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
ATP2A3-205ENST00000397041 DAPK1P53355 1430 aa19.56■□□□□ 0.72
ATP2A3-205ENST00000397041 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 NESP48681 1621 aa19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 FAM43AQ8N2R8 423 aa19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 FAM13BQ9NYF5 915 aa19.55■□□□□ 0.72
ATP2A3-205ENST00000397041 GOLGA6L6A8MZA4 724 aa19.54■□□□□ 0.72
ATP2A3-205ENST00000397041 MRE11P49959 708 aa19.54■□□□□ 0.72
ATP2A3-205ENST00000397041 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
ATP2A3-205ENST00000397041 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
ATP2A3-205ENST00000397041 HMOX1P09601 288 aa19.53■□□□□ 0.72
ATP2A3-205ENST00000397041 POLA1P09884 1462 aaPredicted RBP19.53■□□□□ 0.72
ATP2A3-205ENST00000397041 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
ATP2A3-205ENST00000397041 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
ATP2A3-205ENST00000397041 AFAP1Q8N556 730 aa19.52■□□□□ 0.71
ATP2A3-205ENST00000397041 NRDCO43847 1150 aa19.51■□□□□ 0.71
ATP2A3-205ENST00000397041 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
ATP2A3-205ENST00000397041 CABP2Q9NPB3 220 aa19.51■□□□□ 0.71
ATP2A3-205ENST00000397041 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
ATP2A3-205ENST00000397041 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
ATP2A3-205ENST00000397041 LTV1Q96GA3 475 aaPredicted RBP19.49■□□□□ 0.71
ATP2A3-205ENST00000397041 C1orf115Q9H7X2 142 aa19.49■□□□□ 0.71
ATP2A3-205ENST00000397041 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
ATP2A3-205ENST00000397041 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
ATP2A3-205ENST00000397041 KIF16BQ96L93 1317 aa19.48■□□□□ 0.71
ATP2A3-205ENST00000397041 CDK11BP21127 795 aaKnown RBP19.48■□□□□ 0.71
ATP2A3-205ENST00000397041 NASPP49321 788 aaPredicted RBP19.47■□□□□ 0.71
ATP2A3-205ENST00000397041 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
ATP2A3-205ENST00000397041 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 REC8O95072 547 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 AAMPQ13685 434 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 HDGFP51858 240 aaKnown RBP19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 RNF214Q8ND24 703 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 ERBINQ96RT1 1412 aa19.46■□□□□ 0.71
ATP2A3-205ENST00000397041 PHF14O94880 888 aa19.45■□□□□ 0.7
ATP2A3-205ENST00000397041 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
ATP2A3-205ENST00000397041 ANO2Q9NQ90 1003 aa19.45■□□□□ 0.7
ATP2A3-205ENST00000397041 API5Q9BZZ5 524 aaKnown RBP19.44■□□□□ 0.7
ATP2A3-205ENST00000397041 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
ATP2A3-205ENST00000397041 MCM4P33991 863 aa19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 EPRSP07814 1512 aaKnown RBP19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 AMPHP49418 695 aa19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 CAVIN1Q6NZI2 390 aaKnown RBP19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 COG3Q96JB2 828 aa19.43■□□□□ 0.7
ATP2A3-205ENST00000397041 NUCB2P80303 420 aa19.42■□□□□ 0.7
ATP2A3-205ENST00000397041 R3HCC1Q9Y3T6 440 aaKnown RBP19.42■□□□□ 0.7
ATP2A3-205ENST00000397041 PRKCSHP14314 528 aaPredicted RBP19.42■□□□□ 0.7
ATP2A3-205ENST00000397041 WWC1Q8IX03 1113 aa19.42■□□□□ 0.7
ATP2A3-205ENST00000397041 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
ATP2A3-205ENST00000397041 ABCC5O15440 1437 aa19.41■□□□□ 0.7
ATP2A3-205ENST00000397041 ROCK1Q13464 1354 aa19.41■□□□□ 0.7
ATP2A3-205ENST00000397041 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
ATP2A3-205ENST00000397041 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
ATP2A3-205ENST00000397041 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
ATP2A3-205ENST00000397041 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
ATP2A3-205ENST00000397041 CDC45O75419 566 aa19.39■□□□□ 0.7
ATP2A3-205ENST00000397041 DUSP27Q5VZP5 1158 aa19.39■□□□□ 0.7
ATP2A3-205ENST00000397041 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.7
ATP2A3-205ENST00000397041 HSP90B1P14625 803 aaKnown RBP19.39■□□□□ 0.69
ATP2A3-205ENST00000397041 MVPQ14764 893 aaKnown RBP19.39■□□□□ 0.69
ATP2A3-205ENST00000397041 GNAI1P63096 354 aa19.37■□□□□ 0.69
ATP2A3-205ENST00000397041 GRPEL1Q9HAV7 217 aa19.37■□□□□ 0.69
ATP2A3-205ENST00000397041 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.37■□□□□ 0.69
ATP2A3-205ENST00000397041 PRPF40AO75400 957 aaKnown RBP19.36■□□□□ 0.69
ATP2A3-205ENST00000397041 PRKAR2BP31323 418 aa19.36■□□□□ 0.69
ATP2A3-205ENST00000397041 CSPP1Q1MSJ5 1256 aa19.36■□□□□ 0.69
ATP2A3-205ENST00000397041 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
ATP2A3-205ENST00000397041 ATF7IPQ6VMQ6 1270 aa19.36■□□□□ 0.69
ATP2A3-205ENST00000397041 GNL2Q13823 731 aaKnown RBP19.35■□□□□ 0.69
ATP2A3-205ENST00000397041 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
ATP2A3-205ENST00000397041 CCDC9Q9Y3X0 531 aaKnown RBP19.35■□□□□ 0.69
ATP2A3-205ENST00000397041 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 FKBP5Q13451 457 aaPredicted RBP19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 MPNDQ8N594 471 aa19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 IGHDP01880 384 aa19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 RBM10P98175 930 aaKnown RBP19.34■□□□□ 0.69
ATP2A3-205ENST00000397041 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.69
ATP2A3-205ENST00000397041 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.69
ATP2A3-205ENST00000397041 HMGXB3Q12766 1538 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms