RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 CCDC146Q8IYE0 955 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 REC8O95072 547 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 SPC24Q8NBT2 197 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 POGKQ9P215 609 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 ZRSR2Q15696 482 aaKnown RBP8.3□□□□□ -1.08
PDE1C-203ENST00000396184 C22orf23Q9BZE7 217 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 TTLL5Q6EMB2 1281 aa8.3□□□□□ -1.08
PDE1C-203ENST00000396184 GTF2A1P52655 376 aaPredicted RBP8.29□□□□□ -1.08
PDE1C-203ENST00000396184 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
PDE1C-203ENST00000396184 PDILTQ8N807 584 aa8.29□□□□□ -1.08
PDE1C-203ENST00000396184 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
PDE1C-203ENST00000396184 EIF3JO75822 258 aaKnown RBP8.29□□□□□ -1.08
PDE1C-203ENST00000396184 DNAJC2Q99543 621 aaKnown RBP8.29□□□□□ -1.08
PDE1C-203ENST00000396184 TICAM2Q86XR7 235 aa8.29□□□□□ -1.08
PDE1C-203ENST00000396184 HOOK1Q9UJC3 728 aaKnown RBP8.29□□□□□ -1.08
PDE1C-203ENST00000396184 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
PDE1C-203ENST00000396184 CCP110O43303 1012 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 IBSPP21815 317 aaPredicted RBP8.28□□□□□ -1.08
PDE1C-203ENST00000396184 NEXNQ0ZGT2 675 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 PHLDB1Q86UU1 1377 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 PAXIP1Q6ZW49 1069 aaPredicted RBP8.28□□□□□ -1.08
PDE1C-203ENST00000396184 SETD5Q9C0A6 1442 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
PDE1C-203ENST00000396184 LETM1O95202 739 aaPredicted RBP8.27□□□□□ -1.08
PDE1C-203ENST00000396184 WWC1Q8IX03 1113 aa8.27□□□□□ -1.08
PDE1C-203ENST00000396184 MPNDQ8N594 471 aa8.27□□□□□ -1.08
PDE1C-203ENST00000396184 ZSCAN30Q86W11 494 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 TIGD1Q96MW7 591 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 CCDC73Q6ZRK6 1079 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 CHMP4CQ96CF2 233 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 GOLGA6L10A6NI86 522 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 MBD3O95983 291 aa8.27□□□□□ -1.09
PDE1C-203ENST00000396184 COG6Q9Y2V7 657 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.26□□□□□ -1.09
PDE1C-203ENST00000396184 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 SMC3Q9UQE7 1217 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 ERLIN1O75477 346 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 SMC2O95347 1197 aa8.26□□□□□ -1.09
PDE1C-203ENST00000396184 TOMM22Q9NS69 142 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 MARCH6O60337 910 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
PDE1C-203ENST00000396184 DDX11Q96FC9 970 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 MYO6Q9UM54 1294 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 SOX12O15370 315 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
PDE1C-203ENST00000396184 CLASRPQ8N2M8 674 aaKnown RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 FAM193AP78312 1265 aa8.24□□□□□ -1.09
PDE1C-203ENST00000396184 ANO2Q9NQ90 1003 aa8.24□□□□□ -1.09
PDE1C-203ENST00000396184 ROCK2O75116 1388 aaKnown RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 ZKSCAN1P17029 563 aaPredicted RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 CFDP1Q9UEE9 299 aaPredicted RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 OLFM4Q6UX06 510 aa8.24□□□□□ -1.09
PDE1C-203ENST00000396184 GTF2F1P35269 517 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 CT47A1Q5JQC4 288 aaPredicted RBP8.24□□□□□ -1.09
PDE1C-203ENST00000396184 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 LRRCC1Q9C099 1032 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 ZKSCAN2Q63HK3 967 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 MSH5O43196 834 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 AKAP17AQ02040 695 aaKnown RBP8.23□□□□□ -1.09
PDE1C-203ENST00000396184 TRIM29Q14134 588 aa8.23□□□□□ -1.09
PDE1C-203ENST00000396184 MYBBP1AQ9BQG0 1328 aaKnown RBP8.23□□□□□ -1.09
PDE1C-203ENST00000396184 MNAT1P51948 309 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 SDF4Q9BRK5 362 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 SPDYE4A6NLX3 237 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 KIF15Q9NS87 1388 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
PDE1C-203ENST00000396184 HSP90AB2PQ58FF8 381 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 ODF2Q5BJF6 829 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 TMCO3Q6UWJ1 677 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 HDAC5Q9UQL6 1122 aa8.22□□□□□ -1.09
PDE1C-203ENST00000396184 CCDC47Q96A33 483 aaKnown RBP8.22□□□□□ -1.09
PDE1C-203ENST00000396184 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
PDE1C-203ENST00000396184 FAM177A1Q8N128 213 aaPredicted RBP8.22□□□□□ -1.09
PDE1C-203ENST00000396184 FOSBP53539 338 aa8.21□□□□□ -1.09
PDE1C-203ENST00000396184 SPAG9O60271 1321 aaKnown RBP8.21□□□□□ -1.09
PDE1C-203ENST00000396184 FOXD1Q16676 465 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 RRP7AQ9Y3A4 280 aaKnown RBP8.21□□□□□ -1.1
PDE1C-203ENST00000396184 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.1
PDE1C-203ENST00000396184 FMNL2Q96PY5 1086 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 FAM107BQ9H098 131 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 CPLX1O14810 134 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 RUFY2Q8WXA3 655 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.1
PDE1C-203ENST00000396184 TDO2P48775 406 aa8.2□□□□□ -1.1
PDE1C-203ENST00000396184 CLGNO14967 610 aa8.2□□□□□ -1.1
PDE1C-203ENST00000396184 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
PDE1C-203ENST00000396184 UBXN4Q92575 508 aa8.2□□□□□ -1.1
PDE1C-203ENST00000396184 CCDC192P0DO97 292 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms