RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 EIF4G2P78344 907 aaKnown RBP eCLIP28.88■■■□□ 2.21
VCPKMT-202ENST00000395860 KIAA1210Q9ULL0 1709 aa28.87■■■□□ 2.21
VCPKMT-202ENST00000395860 A2ML1A8K2U0 1454 aa28.87■■■□□ 2.21
VCPKMT-202ENST00000395860 ADGRF5Q8IZF2 1346 aa28.86■■■□□ 2.21
VCPKMT-202ENST00000395860 NLRP1Q9C000 1473 aa28.86■■■□□ 2.21
VCPKMT-202ENST00000395860 NRXN1Q9ULB1 1477 aa28.86■■■□□ 2.21
VCPKMT-202ENST00000395860 UBR1Q8IWV7 1749 aa28.85■■■□□ 2.21
VCPKMT-202ENST00000395860 CARD11Q9BXL7 1154 aa28.85■■■□□ 2.21
VCPKMT-202ENST00000395860 HIRIP3Q9BW71 556 aaPredicted RBP28.84■■■□□ 2.21
VCPKMT-202ENST00000395860 LAMC1P11047 1609 aa28.84■■■□□ 2.21
VCPKMT-202ENST00000395860 VGFO15240 615 aaPredicted RBP28.83■■■□□ 2.21
VCPKMT-202ENST00000395860 HSPA5P11021 654 aaKnown RBP28.83■■■□□ 2.21
VCPKMT-202ENST00000395860 NBPF1Q3BBV0 1214 aa28.81■■■□□ 2.2
VCPKMT-202ENST00000395860 MYO3AQ8NEV4 1616 aa28.81■■■□□ 2.2
VCPKMT-202ENST00000395860 GPRASP1Q5JY77 1395 aa28.8■■■□□ 2.2
VCPKMT-202ENST00000395860 NUTM2DQ5VT03 806 aaPredicted RBP28.8■■■□□ 2.2
VCPKMT-202ENST00000395860 USP47Q96K76 1375 aa28.79■■■□□ 2.2
VCPKMT-202ENST00000395860 PIK3C2GO75747 1445 aa28.79■■■□□ 2.2
VCPKMT-202ENST00000395860 ZFYVE9O95405 1425 aa28.79■■■□□ 2.2
VCPKMT-202ENST00000395860 RIMS2Q9UQ26 1411 aa28.75■■■□□ 2.19
VCPKMT-202ENST00000395860 CFAP70Q5T0N1 1121 aa28.74■■■□□ 2.19
VCPKMT-202ENST00000395860 PTPRMP28827 1452 aa28.73■■■□□ 2.19
VCPKMT-202ENST00000395860 IQGAP1P46940 1657 aa28.71■■■□□ 2.19
VCPKMT-202ENST00000395860 SETD1BQ9UPS6 1966 aaKnown RBP28.71■■■□□ 2.19
VCPKMT-202ENST00000395860 SETBP1Q9Y6X0 1596 aa28.7■■■□□ 2.19
VCPKMT-202ENST00000395860 CEP170BQ9Y4F5 1589 aaPredicted RBP28.69■■■□□ 2.18
VCPKMT-202ENST00000395860 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.69■■■□□ 2.18
VCPKMT-202ENST00000395860 C14orf93Q9H972 538 aaKnown RBP28.69■■■□□ 2.18
VCPKMT-202ENST00000395860 HDGFP51858 240 aaKnown RBP28.68■■■□□ 2.18
VCPKMT-202ENST00000395860 TMEM2Q9UHN6 1383 aa28.68■■■□□ 2.18
VCPKMT-202ENST00000395860 ZNF142P52746 1687 aaPredicted RBP28.67■■■□□ 2.18
VCPKMT-202ENST00000395860 POLR1AO95602 1720 aaPredicted RBP28.65■■■□□ 2.18
VCPKMT-202ENST00000395860 SCAF11Q99590 1463 aaKnown RBP28.64■■■□□ 2.18
VCPKMT-202ENST00000395860 ST20-MTHFSA0A0A6YYL1 179 aa28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 THEMISQ8N1K5 641 aaPredicted RBP28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 DIEXFQ68CQ4 756 aaKnown RBP28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 SENP3Q9H4L4 574 aaPredicted RBP28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 SLIT1O75093 1534 aa28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 ADGRB1O14514 1584 aa28.62■■■□□ 2.17
VCPKMT-202ENST00000395860 ALKQ9UM73 1620 aa28.6■■■□□ 2.17
VCPKMT-202ENST00000395860 ARHGAP23Q9P227 1491 aa28.59■■■□□ 2.17
VCPKMT-202ENST00000395860 EIF3AQ14152 1382 aaKnown RBP28.57■■■□□ 2.16
VCPKMT-202ENST00000395860 NRXN3Q9Y4C0 1643 aa28.57■■■□□ 2.16
VCPKMT-202ENST00000395860 TMEM132EQ6IEE7 984 aa28.56■■■□□ 2.16
VCPKMT-202ENST00000395860 EID1Q9Y6B2 187 aa28.56■■■□□ 2.16
VCPKMT-202ENST00000395860 SETD1AO15047 1707 aaKnown RBP28.55■■■□□ 2.16
VCPKMT-202ENST00000395860 TXNDC2Q86VQ3 553 aa28.55■■■□□ 2.16
VCPKMT-202ENST00000395860 ASXL1Q8IXJ9 1541 aa28.54■■■□□ 2.16
VCPKMT-202ENST00000395860 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
VCPKMT-202ENST00000395860 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
VCPKMT-202ENST00000395860 LTKP29376 864 aa28.52■■■□□ 2.16
VCPKMT-202ENST00000395860 CCDC7Q96M83 1385 aa28.51■■■□□ 2.15
VCPKMT-202ENST00000395860 KDM4FA0A1W2PPD8 638 aa28.5■■■□□ 2.15
VCPKMT-202ENST00000395860 BCANQ96GW7 911 aa28.5■■■□□ 2.15
VCPKMT-202ENST00000395860 PLEKHG1Q9ULL1 1385 aa28.5■■■□□ 2.15
VCPKMT-202ENST00000395860 DDX10Q13206 875 aaKnown RBP28.49■■■□□ 2.15
VCPKMT-202ENST00000395860 ARHGEF28Q8N1W1 1705 aaKnown RBP28.48■■■□□ 2.15
VCPKMT-202ENST00000395860 TRAK1Q9UPV9 953 aa28.48■■■□□ 2.15
VCPKMT-202ENST00000395860 KIF7Q2M1P5 1343 aa28.48■■■□□ 2.15
VCPKMT-202ENST00000395860 TESK2Q96S53 571 aa28.47■■■□□ 2.15
VCPKMT-202ENST00000395860 YTHDC2Q9H6S0 1430 aaKnown RBP28.45■■■□□ 2.14
VCPKMT-202ENST00000395860 QRICH2Q9H0J4 1663 aa28.44■■■□□ 2.14
VCPKMT-202ENST00000395860 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
VCPKMT-202ENST00000395860 STK26Q9P289 416 aa28.42■■■□□ 2.14
VCPKMT-202ENST00000395860 TMF1P82094 1093 aa28.41■■■□□ 2.14
VCPKMT-202ENST00000395860 POLR3GLQ9BT43 218 aa28.41■■■□□ 2.14
VCPKMT-202ENST00000395860 CENPJQ9HC77 1338 aaPredicted RBP28.41■■■□□ 2.14
VCPKMT-202ENST00000395860 ANKLE2Q86XL3 938 aa28.4■■■□□ 2.14
VCPKMT-202ENST00000395860 METP08581 1390 aa28.38■■■□□ 2.13
VCPKMT-202ENST00000395860 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
VCPKMT-202ENST00000395860 DIP2AQ14689 1571 aa28.38■■■□□ 2.13
VCPKMT-202ENST00000395860 LRPPRCP42704 1394 aaKnown RBP28.37■■■□□ 2.13
VCPKMT-202ENST00000395860 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
VCPKMT-202ENST00000395860 MED14O60244 1454 aa28.36■■■□□ 2.13
VCPKMT-202ENST00000395860 KNDC1Q76NI1 1749 aa28.36■■■□□ 2.13
VCPKMT-202ENST00000395860 SBNO2Q9Y2G9 1366 aa28.35■■■□□ 2.13
VCPKMT-202ENST00000395860 DLC1Q96QB1 1528 aa28.34■■■□□ 2.13
VCPKMT-202ENST00000395860 SLC26A8Q96RN1 970 aa28.34■■■□□ 2.13
VCPKMT-202ENST00000395860 TBX22Q9Y458 520 aa28.32■■■□□ 2.12
VCPKMT-202ENST00000395860 ABCC11Q96J66 1382 aa28.31■■■□□ 2.12
VCPKMT-202ENST00000395860 CDCA8Q53HL2 280 aa28.3■■■□□ 2.12
VCPKMT-202ENST00000395860 POGKQ9P215 609 aa28.29■■■□□ 2.12
VCPKMT-202ENST00000395860 PRAM1Q96QH2 718 aa28.29■■■□□ 2.12
VCPKMT-202ENST00000395860 CPS1P31327 1500 aa28.27■■■□□ 2.12
VCPKMT-202ENST00000395860 TECPR2O15040 1411 aa28.27■■■□□ 2.12
VCPKMT-202ENST00000395860 SAFB2Q14151 953 aaKnown RBP eCLIP28.27■■■□□ 2.12
VCPKMT-202ENST00000395860 NPHP4O75161 1426 aaPredicted RBP28.25■■■□□ 2.11
VCPKMT-202ENST00000395860 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
VCPKMT-202ENST00000395860 PTPRUQ92729 1446 aa28.22■■■□□ 2.11
VCPKMT-202ENST00000395860 SIRT1Q96EB6 747 aa28.22■■■□□ 2.11
VCPKMT-202ENST00000395860 FAM135BQ49AJ0 1406 aa28.21■■■□□ 2.11
VCPKMT-202ENST00000395860 MIER1Q8N108 512 aa28.21■■■□□ 2.11
VCPKMT-202ENST00000395860 LMTK3Q96Q04 1460 aa28.21■■■□□ 2.11
VCPKMT-202ENST00000395860 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.11
VCPKMT-202ENST00000395860 PIK3R4Q99570 1358 aa28.2■■■□□ 2.11
VCPKMT-202ENST00000395860 EVC2Q86UK5 1308 aa28.2■■■□□ 2.11
VCPKMT-202ENST00000395860 WAPLQ7Z5K2 1190 aa28.2■■■□□ 2.11
VCPKMT-202ENST00000395860 MYOM1P52179 1685 aa28.19■■■□□ 2.1
VCPKMT-202ENST00000395860 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
VCPKMT-202ENST00000395860 MINK1Q8N4C8 1332 aaPredicted RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms