RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 PTPREP23469 700 aa9.42□□□□□ -0.9
HMGB1P10-201ENST00000395823 DNAJB2P25686 324 aa9.42□□□□□ -0.9
HMGB1P10-201ENST00000395823 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
HMGB1P10-201ENST00000395823 TATDN2Q93075 761 aa9.42□□□□□ -0.9
HMGB1P10-201ENST00000395823 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P10-201ENST00000395823 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
HMGB1P10-201ENST00000395823 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
HMGB1P10-201ENST00000395823 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
HMGB1P10-201ENST00000395823 ZNF777Q9ULD5 760 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P10-201ENST00000395823 NBPF26B4DH59 902 aa9.4□□□□□ -0.9
HMGB1P10-201ENST00000395823 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
HMGB1P10-201ENST00000395823 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
HMGB1P10-201ENST00000395823 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
HMGB1P10-201ENST00000395823 QPCTQ16769 361 aa9.39□□□□□ -0.91
HMGB1P10-201ENST00000395823 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
HMGB1P10-201ENST00000395823 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
HMGB1P10-201ENST00000395823 SCUBE2Q9NQ36 999 aa9.39□□□□□ -0.91
HMGB1P10-201ENST00000395823 SMAPO00193 183 aa9.38□□□□□ -0.91
HMGB1P10-201ENST00000395823 RAD21O60216 631 aa9.38□□□□□ -0.91
HMGB1P10-201ENST00000395823 HOXB1P14653 301 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P10-201ENST00000395823 NDUFV2P19404 249 aa9.38□□□□□ -0.91
HMGB1P10-201ENST00000395823 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P10-201ENST00000395823 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
HMGB1P10-201ENST00000395823 PCDHB15Q9Y5E8 787 aa9.37□□□□□ -0.91
HMGB1P10-201ENST00000395823 LILRB3O75022 631 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
HMGB1P10-201ENST00000395823 HRCP23327 699 aa9.35□□□□□ -0.91
HMGB1P10-201ENST00000395823 GJA5P36382 358 aa9.35□□□□□ -0.91
HMGB1P10-201ENST00000395823 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
HMGB1P10-201ENST00000395823 CABLES1Q8TDN4 633 aa9.34□□□□□ -0.91
HMGB1P10-201ENST00000395823 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
HMGB1P10-201ENST00000395823 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
HMGB1P10-201ENST00000395823 SOCS7O14512 581 aa9.32□□□□□ -0.92
HMGB1P10-201ENST00000395823 KDM4AO75164 1064 aa9.32□□□□□ -0.92
HMGB1P10-201ENST00000395823 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
HMGB1P10-201ENST00000395823 ZBED2Q9BTP6 218 aa9.32□□□□□ -0.92
HMGB1P10-201ENST00000395823 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
HMGB1P10-201ENST00000395823 SLC10A3P09131 477 aa9.31□□□□□ -0.92
HMGB1P10-201ENST00000395823 HOXA2O43364 376 aa9.3□□□□□ -0.92
HMGB1P10-201ENST00000395823 GCGRP47871 477 aa9.3□□□□□ -0.92
HMGB1P10-201ENST00000395823 PCDHGC3Q9UN70 934 aa9.3□□□□□ -0.92
HMGB1P10-201ENST00000395823 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
HMGB1P10-201ENST00000395823 SNPHO15079 494 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 AP1G2O75843 785 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 USP17L8P0C7I0 530 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 PSEN2P49810 448 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 HLA-CQ95604 372 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
HMGB1P10-201ENST00000395823 PRPF38BQ5VTL8 546 aaKnown RBP9.28□□□□□ -0.92
HMGB1P10-201ENST00000395823 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P10-201ENST00000395823 SERPINA10Q9UK55 444 aa9.28□□□□□ -0.92
HMGB1P10-201ENST00000395823 USP46P62068 366 aa9.27□□□□□ -0.93
HMGB1P10-201ENST00000395823 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
HMGB1P10-201ENST00000395823 SWT1Q5T5J6 900 aaKnown RBP9.27□□□□□ -0.93
HMGB1P10-201ENST00000395823 GJD4Q96KN9 370 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P10-201ENST00000395823 POM121CA8CG34 1229 aa9.26□□□□□ -0.93
HMGB1P10-201ENST00000395823 GPR37L1O60883 481 aa9.26□□□□□ -0.93
HMGB1P10-201ENST00000395823 FDX1P10109 184 aa9.26□□□□□ -0.93
HMGB1P10-201ENST00000395823 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 ABL2P42684 1182 aa9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 SEPT9Q9UHD8 586 aaPredicted RBP9.25□□□□□ -0.93
HMGB1P10-201ENST00000395823 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
HMGB1P10-201ENST00000395823 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
HMGB1P10-201ENST00000395823 IRF5Q13568 498 aa9.23□□□□□ -0.93
HMGB1P10-201ENST00000395823 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
HMGB1P10-201ENST00000395823 NECTIN2Q92692 538 aa9.23□□□□□ -0.93
HMGB1P10-201ENST00000395823 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
HMGB1P10-201ENST00000395823 OTUD5Q96G74 571 aa9.22□□□□□ -0.93
HMGB1P10-201ENST00000395823 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
HMGB1P10-201ENST00000395823 SLC4A5Q9BY07 1137 aa9.22□□□□□ -0.93
HMGB1P10-201ENST00000395823 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
HMGB1P10-201ENST00000395823 CTDSPL2Q05D32 466 aa9.21□□□□□ -0.94
HMGB1P10-201ENST00000395823 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
HMGB1P10-201ENST00000395823 ARHGAP33O14559 1287 aa9.2□□□□□ -0.94
HMGB1P10-201ENST00000395823 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
HMGB1P10-201ENST00000395823 GLMNQ92990 594 aa9.2□□□□□ -0.94
HMGB1P10-201ENST00000395823 AXIN2Q9Y2T1 843 aa9.2□□□□□ -0.94
HMGB1P10-201ENST00000395823 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
HMGB1P10-201ENST00000395823 VARS2Q5ST30 1063 aaKnown RBP9.19□□□□□ -0.94
HMGB1P10-201ENST00000395823 ADAMTS19Q8TE59 1207 aa9.19□□□□□ -0.94
HMGB1P10-201ENST00000395823 FUT2Q10981 343 aa9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 MTMR2Q13614 643 aa9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 LRRN4Q8WUT4 740 aa9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
HMGB1P10-201ENST00000395823 CFHP08603 1231 aa9.17□□□□□ -0.94
HMGB1P10-201ENST00000395823 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
HMGB1P10-201ENST00000395823 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
HMGB1P10-201ENST00000395823 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
HMGB1P10-201ENST00000395823 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms