RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TXNDC2Q86VQ3 553 aa20.86■□□□□ 0.93
SMARCD1-202ENST00000394963 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
SMARCD1-202ENST00000394963 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
SMARCD1-202ENST00000394963 RGS3P49796 1198 aa20.85■□□□□ 0.93
SMARCD1-202ENST00000394963 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
SMARCD1-202ENST00000394963 CLUAP1Q96AJ1 413 aa20.84■□□□□ 0.93
SMARCD1-202ENST00000394963 SLC26A8Q96RN1 970 aa20.84■□□□□ 0.93
SMARCD1-202ENST00000394963 UGGT1Q9NYU2 1555 aa20.83■□□□□ 0.93
SMARCD1-202ENST00000394963 MTHFSP49914 203 aa20.83■□□□□ 0.93
SMARCD1-202ENST00000394963 CDC42BPBQ9Y5S2 1711 aa20.83■□□□□ 0.93
SMARCD1-202ENST00000394963 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
SMARCD1-202ENST00000394963 RALGAPBQ86X10 1494 aa20.82■□□□□ 0.92
SMARCD1-202ENST00000394963 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
SMARCD1-202ENST00000394963 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
SMARCD1-202ENST00000394963 GOLGA2Q08379 1002 aa20.8■□□□□ 0.92
SMARCD1-202ENST00000394963 MYO5CQ9NQX4 1742 aa20.8■□□□□ 0.92
SMARCD1-202ENST00000394963 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
SMARCD1-202ENST00000394963 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
SMARCD1-202ENST00000394963 PER1O15534 1290 aaPredicted RBP20.79■□□□□ 0.92
SMARCD1-202ENST00000394963 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
SMARCD1-202ENST00000394963 HDGFL2Q7Z4V5 671 aaPredicted RBP20.78■□□□□ 0.92
SMARCD1-202ENST00000394963 CABP1Q9NZU7 370 aa20.77■□□□□ 0.92
SMARCD1-202ENST00000394963 BRD4O60885 1362 aaPredicted RBP20.77■□□□□ 0.92
SMARCD1-202ENST00000394963 DAXXQ9UER7 740 aaPredicted RBP20.77■□□□□ 0.92
SMARCD1-202ENST00000394963 ELL2O00472 640 aaPredicted RBP20.76■□□□□ 0.91
SMARCD1-202ENST00000394963 PAK3O75914 559 aaPredicted RBP20.76■□□□□ 0.91
SMARCD1-202ENST00000394963 ATP7AQ04656 1500 aa20.75■□□□□ 0.91
SMARCD1-202ENST00000394963 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
SMARCD1-202ENST00000394963 TCERG1O14776 1098 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 CRBNQ96SW2 442 aa20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 NBR1Q14596 966 aa20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 YEATS2Q9ULM3 1422 aa20.74■□□□□ 0.91
SMARCD1-202ENST00000394963 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 TERF2IPQ9NYB0 399 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 ARHGEF5Q12774 1597 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 HMOX1P09601 288 aa20.73■□□□□ 0.91
SMARCD1-202ENST00000394963 SLC52A1Q9NWF4 448 aa20.72■□□□□ 0.91
SMARCD1-202ENST00000394963 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
SMARCD1-202ENST00000394963 CDK19Q9BWU1 502 aa20.71■□□□□ 0.91
SMARCD1-202ENST00000394963 ANP32AP39687 249 aaKnown RBP20.7■□□□□ 0.9
SMARCD1-202ENST00000394963 NCKAP5LQ9HCH0 1330 aa20.7■□□□□ 0.9
SMARCD1-202ENST00000394963 ABCC1P33527 1531 aa20.69■□□□□ 0.9
SMARCD1-202ENST00000394963 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
SMARCD1-202ENST00000394963 PMFBP1Q8TBY8 1022 aa20.69■□□□□ 0.9
SMARCD1-202ENST00000394963 C14orf93Q9H972 538 aaKnown RBP20.69■□□□□ 0.9
SMARCD1-202ENST00000394963 UHRF1BP1Q6BDS2 1440 aa20.68■□□□□ 0.9
SMARCD1-202ENST00000394963 LTV1Q96GA3 475 aaPredicted RBP20.68■□□□□ 0.9
SMARCD1-202ENST00000394963 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
SMARCD1-202ENST00000394963 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
SMARCD1-202ENST00000394963 NSD3Q9BZ95 1437 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 BCAR3O75815 825 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 ATP10AO60312 1499 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 TCP11L2Q8N4U5 519 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 RTEL1-TNFRSF6BF6WH68 1400 aa20.66■□□□□ 0.9
SMARCD1-202ENST00000394963 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
SMARCD1-202ENST00000394963 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
SMARCD1-202ENST00000394963 TSPOAP1O95153 1857 aa20.64■□□□□ 0.9
SMARCD1-202ENST00000394963 FTSJ3Q8IY81 847 aaKnown RBP20.64■□□□□ 0.89
SMARCD1-202ENST00000394963 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
SMARCD1-202ENST00000394963 BCORL1Q5H9F3 1711 aa20.64■□□□□ 0.89
SMARCD1-202ENST00000394963 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
SMARCD1-202ENST00000394963 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
SMARCD1-202ENST00000394963 NPATQ14207 1427 aa20.63■□□□□ 0.89
SMARCD1-202ENST00000394963 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
SMARCD1-202ENST00000394963 PDE3BQ13370 1112 aa20.6■□□□□ 0.89
SMARCD1-202ENST00000394963 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
SMARCD1-202ENST00000394963 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
SMARCD1-202ENST00000394963 CROCC2H7BZ55 1655 aa20.59■□□□□ 0.89
SMARCD1-202ENST00000394963 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
SMARCD1-202ENST00000394963 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
SMARCD1-202ENST00000394963 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
SMARCD1-202ENST00000394963 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
SMARCD1-202ENST00000394963 KDM5CP41229 1560 aa20.57■□□□□ 0.88
SMARCD1-202ENST00000394963 ZFYVE16Q7Z3T8 1539 aa20.56■□□□□ 0.88
SMARCD1-202ENST00000394963 THUMPD2Q9BTF0 503 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-202ENST00000394963 SPINK5Q9NQ38 1064 aaPredicted RBP20.55■□□□□ 0.88
SMARCD1-202ENST00000394963 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
SMARCD1-202ENST00000394963 RIPK4P57078 832 aa20.55■□□□□ 0.88
SMARCD1-202ENST00000394963 RPGRIP1LQ68CZ1 1315 aa20.54■□□□□ 0.88
SMARCD1-202ENST00000394963 KDM5DQ9BY66 1539 aa20.54■□□□□ 0.88
SMARCD1-202ENST00000394963 DIAPH1O60610 1272 aaKnown RBP20.54■□□□□ 0.88
SMARCD1-202ENST00000394963 NME9Q86XW9 330 aa20.54■□□□□ 0.88
SMARCD1-202ENST00000394963 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
SMARCD1-202ENST00000394963 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
SMARCD1-202ENST00000394963 COG3Q96JB2 828 aa20.52■□□□□ 0.88
SMARCD1-202ENST00000394963 ZBTB47Q9UFB7 747 aaPredicted RBP20.52■□□□□ 0.88
SMARCD1-202ENST00000394963 PRDM15P57071 1507 aaPredicted RBP20.52■□□□□ 0.87
SMARCD1-202ENST00000394963 COL17A1Q9UMD9 1497 aaPredicted RBP20.52■□□□□ 0.87
SMARCD1-202ENST00000394963 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
SMARCD1-202ENST00000394963 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-202ENST00000394963 MAGI2Q86UL8 1455 aa20.5■□□□□ 0.87
SMARCD1-202ENST00000394963 EMILIN1Q9Y6C2 1016 aa20.5■□□□□ 0.87
SMARCD1-202ENST00000394963 GPRASP1Q5JY77 1395 aa20.5■□□□□ 0.87
SMARCD1-202ENST00000394963 E9PSI1 815 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms