RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 MYBBP1AQ9BQG0 1328 aaKnown RBP25.15■■□□□ 1.62
CXXC4-201ENST00000394767 ADGRF5Q8IZF2 1346 aa25.14■■□□□ 1.62
CXXC4-201ENST00000394767 NLRP6P59044 892 aa25.14■■□□□ 1.61
CXXC4-201ENST00000394767 PRKRIP1Q9H875 184 aaPredicted RBP25.13■■□□□ 1.61
CXXC4-201ENST00000394767 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
CXXC4-201ENST00000394767 SUPT16HQ9Y5B9 1047 aaKnown RBP25.13■■□□□ 1.61
CXXC4-201ENST00000394767 GPRASP1Q5JY77 1395 aa25.11■■□□□ 1.61
CXXC4-201ENST00000394767 SLC12A5Q9H2X9 1139 aa25.11■■□□□ 1.61
CXXC4-201ENST00000394767 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
CXXC4-201ENST00000394767 NPHP1O15259 732 aa25.09■■□□□ 1.61
CXXC4-201ENST00000394767 CABP1Q9NZU7 370 aa25.09■■□□□ 1.61
CXXC4-201ENST00000394767 ABTB2Q8N961 1025 aa25.08■■□□□ 1.61
CXXC4-201ENST00000394767 MAGI3Q5TCQ9 1506 aa25.08■■□□□ 1.61
CXXC4-201ENST00000394767 CALD1Q05682 793 aaKnown RBP25.08■■□□□ 1.61
CXXC4-201ENST00000394767 NEO1Q92859 1461 aa25.07■■□□□ 1.6
CXXC4-201ENST00000394767 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
CXXC4-201ENST00000394767 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
CXXC4-201ENST00000394767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.06■■□□□ 1.6
CXXC4-201ENST00000394767 RBM33Q96EV2 1170 aaKnown RBP25.06■■□□□ 1.6
CXXC4-201ENST00000394767 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
CXXC4-201ENST00000394767 NOS1P29475 1434 aa25.05■■□□□ 1.6
CXXC4-201ENST00000394767 ATP10AO60312 1499 aa25.05■■□□□ 1.6
CXXC4-201ENST00000394767 SHANK2Q9UPX8 1470 aa25.05■■□□□ 1.6
CXXC4-201ENST00000394767 ZMYM3Q14202 1370 aa25.03■■□□□ 1.6
CXXC4-201ENST00000394767 FAM135AQ9P2D6 1515 aa25.03■■□□□ 1.6
CXXC4-201ENST00000394767 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
CXXC4-201ENST00000394767 RRP7AQ9Y3A4 280 aaKnown RBP25.02■■□□□ 1.6
CXXC4-201ENST00000394767 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
CXXC4-201ENST00000394767 ATP7AQ04656 1500 aa25■■□□□ 1.59
CXXC4-201ENST00000394767 PIP4K2BP78356 416 aa25■■□□□ 1.59
CXXC4-201ENST00000394767 DMRT2Q9Y5R5 561 aa24.98■■□□□ 1.59
CXXC4-201ENST00000394767 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
CXXC4-201ENST00000394767 LMOD3Q0VAK6 560 aa24.97■■□□□ 1.59
CXXC4-201ENST00000394767 RPRD2Q5VT52 1461 aaKnown RBP24.97■■□□□ 1.59
CXXC4-201ENST00000394767 HSPA2P54652 639 aa24.96■■□□□ 1.59
CXXC4-201ENST00000394767 CCDC61Q9Y6R9 512 aa24.96■■□□□ 1.59
CXXC4-201ENST00000394767 ZCCHC11Q5TAX3 1644 aaKnown RBP24.96■■□□□ 1.59
CXXC4-201ENST00000394767 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
CXXC4-201ENST00000394767 XPCQ01831 940 aaPredicted RBP24.95■■□□□ 1.59
CXXC4-201ENST00000394767 MS4A1P11836 297 aa24.95■■□□□ 1.58
CXXC4-201ENST00000394767 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
CXXC4-201ENST00000394767 DNMT1P26358 1616 aaKnown RBP24.95■■□□□ 1.58
CXXC4-201ENST00000394767 C1orf141Q5JVX7 400 aa24.94■■□□□ 1.58
CXXC4-201ENST00000394767 NLRP2Q9NX02 1062 aa24.93■■□□□ 1.58
CXXC4-201ENST00000394767 GOLGA2Q08379 1002 aa24.93■■□□□ 1.58
CXXC4-201ENST00000394767 ATAD2Q6PL18 1390 aa24.92■■□□□ 1.58
CXXC4-201ENST00000394767 YEATS2Q9ULM3 1422 aa24.91■■□□□ 1.58
CXXC4-201ENST00000394767 MTHFSP49914 203 aa24.91■■□□□ 1.58
CXXC4-201ENST00000394767 CNTLNQ9NXG0 1405 aa24.9■■□□□ 1.58
CXXC4-201ENST00000394767 TSPOAP1O95153 1857 aa24.9■■□□□ 1.58
CXXC4-201ENST00000394767 UPF2Q9HAU5 1272 aaKnown RBP24.89■■□□□ 1.58
CXXC4-201ENST00000394767 MYO5CQ9NQX4 1742 aa24.89■■□□□ 1.57
CXXC4-201ENST00000394767 MAPKBP1O60336 1514 aa24.89■■□□□ 1.57
CXXC4-201ENST00000394767 HMOX1P09601 288 aa24.88■■□□□ 1.57
CXXC4-201ENST00000394767 CHMP4BQ9H444 224 aaKnown RBP24.88■■□□□ 1.57
CXXC4-201ENST00000394767 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
CXXC4-201ENST00000394767 RAPGEF4Q8WZA2 1011 aa24.87■■□□□ 1.57
CXXC4-201ENST00000394767 ZFYVE16Q7Z3T8 1539 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 APAF1O14727 1248 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 STK31Q9BXU1 1019 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 NUTM2BA6NNL0 878 aaPredicted RBP24.86■■□□□ 1.57
CXXC4-201ENST00000394767 NUTM2EB1AL46 878 aaPredicted RBP24.86■■□□□ 1.57
CXXC4-201ENST00000394767 TEFQ10587 303 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 NUTM2AQ8IVF1 878 aaPredicted RBP24.86■■□□□ 1.57
CXXC4-201ENST00000394767 RIMS2Q9UQ26 1411 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 USP35Q9P2H5 1018 aa24.86■■□□□ 1.57
CXXC4-201ENST00000394767 CHMP4AQ9BY43 222 aa24.85■■□□□ 1.57
CXXC4-201ENST00000394767 TTC37Q6PGP7 1564 aa24.85■■□□□ 1.57
CXXC4-201ENST00000394767 ADGRL2O95490 1459 aa24.84■■□□□ 1.57
CXXC4-201ENST00000394767 IPO8O15397 1037 aaKnown RBP24.84■■□□□ 1.57
CXXC4-201ENST00000394767 MBD5Q9P267 1494 aa24.83■■□□□ 1.57
CXXC4-201ENST00000394767 WASLO00401 505 aaPredicted RBP24.83■■□□□ 1.57
CXXC4-201ENST00000394767 FOXO3O43524 673 aa24.82■■□□□ 1.56
CXXC4-201ENST00000394767 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
CXXC4-201ENST00000394767 RCAN3Q9UKA8 241 aa24.81■■□□□ 1.56
CXXC4-201ENST00000394767 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
CXXC4-201ENST00000394767 OS9Q13438 667 aaPredicted RBP24.81■■□□□ 1.56
CXXC4-201ENST00000394767 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
CXXC4-201ENST00000394767 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
CXXC4-201ENST00000394767 ELL2O00472 640 aaPredicted RBP24.8■■□□□ 1.56
CXXC4-201ENST00000394767 PHF8Q9UPP1 1060 aa24.79■■□□□ 1.56
CXXC4-201ENST00000394767 SMC4Q9NTJ3 1288 aa24.79■■□□□ 1.56
CXXC4-201ENST00000394767 RIPK4P57078 832 aa24.78■■□□□ 1.56
CXXC4-201ENST00000394767 PPP2R1AP30153 589 aa24.78■■□□□ 1.56
CXXC4-201ENST00000394767 ANP32AP39687 249 aaKnown RBP24.77■■□□□ 1.56
CXXC4-201ENST00000394767 PRDM11Q9NQV5 511 aa24.77■■□□□ 1.56
CXXC4-201ENST00000394767 PDE3BQ13370 1112 aa24.76■■□□□ 1.55
CXXC4-201ENST00000394767 SCAF11Q99590 1463 aaKnown RBP24.75■■□□□ 1.55
CXXC4-201ENST00000394767 SAMD9LQ8IVG5 1584 aa24.75■■□□□ 1.55
CXXC4-201ENST00000394767 ZC3H6P61129 1189 aaKnown RBP24.74■■□□□ 1.55
CXXC4-201ENST00000394767 RUNDC1Q96C34 613 aa24.74■■□□□ 1.55
CXXC4-201ENST00000394767 CADPS2Q86UW7 1296 aa24.74■■□□□ 1.55
CXXC4-201ENST00000394767 ARHGEF5Q12774 1597 aa24.73■■□□□ 1.55
CXXC4-201ENST00000394767 PZPP20742 1482 aa24.73■■□□□ 1.55
CXXC4-201ENST00000394767 TTC5Q8N0Z6 440 aa24.72■■□□□ 1.55
CXXC4-201ENST00000394767 RRS1Q15050 365 aaKnown RBP24.72■■□□□ 1.55
CXXC4-201ENST00000394767 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
CXXC4-201ENST00000394767 C11orf95C9JLR9 678 aaPredicted RBP24.7■■□□□ 1.54
CXXC4-201ENST00000394767 HSP90AA1P07900 732 aaKnown RBP24.7■■□□□ 1.54
CXXC4-201ENST00000394767 NSD3Q9BZ95 1437 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms