RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 CFDP1Q9UEE9 299 aaPredicted RBP7.39□□□□□ -1.23
GTDC1-204ENST00000392869 CFAP57Q96MR6 1250 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 HSP90AB4PQ58FF6 505 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 CCDC112Q8NEF3 446 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
GTDC1-204ENST00000392869 KIF15Q9NS87 1388 aa7.39□□□□□ -1.23
GTDC1-204ENST00000392869 MICALCLQ6ZW33 695 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 DDX12PQ92771 950 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 WASHC2AQ641Q2 1341 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 TUBB4BP68371 445 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 SLC26A8Q96RN1 970 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.38□□□□□ -1.23
GTDC1-204ENST00000392869 MORC1Q86VD1 984 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 TRIM21P19474 475 aaKnown RBP7.38□□□□□ -1.23
GTDC1-204ENST00000392869 TERF2IPQ9NYB0 399 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
GTDC1-204ENST00000392869 SAFBQ15424 915 aaKnown RBP eCLIP7.38□□□□□ -1.23
GTDC1-204ENST00000392869 PLEKHG5O94827 1062 aa7.38□□□□□ -1.23
GTDC1-204ENST00000392869 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 NLRP13Q86W25 1043 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 FILIP1LQ4L180 1135 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 STAMBPO95630 424 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 TRIM6-TRIM34B2RNG4 842 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 SH3BGRP55822 239 aaPredicted RBP7.37□□□□□ -1.23
GTDC1-204ENST00000392869 CCAR2Q8N163 923 aaKnown RBP7.37□□□□□ -1.23
GTDC1-204ENST00000392869 ERICH2A1L162 156 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 EPS15P42566 896 aa7.37□□□□□ -1.23
GTDC1-204ENST00000392869 NOL10Q9BSC4 688 aaKnown RBP7.37□□□□□ -1.23
GTDC1-204ENST00000392869 MAP9Q49MG5 647 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 LUZP1Q86V48 1076 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
GTDC1-204ENST00000392869 FMN1Q68DA7 1419 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 HIP1O00291 1037 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 SEPT11Q9NVA2 429 aaKnown RBP7.36□□□□□ -1.23
GTDC1-204ENST00000392869 PSMA5P28066 241 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 RGL3Q3MIN7 710 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 B4GALNT3Q6L9W6 998 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 CCDC73Q6ZRK6 1079 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 CCDC91Q7Z6B0 441 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
GTDC1-204ENST00000392869 CHMP3Q9Y3E7 222 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 DHX16O60231 1041 aaKnown RBP7.36□□□□□ -1.23
GTDC1-204ENST00000392869 TRDNQ13061 729 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 SEPT7Q16181 437 aaKnown RBP7.36□□□□□ -1.23
GTDC1-204ENST00000392869 ANKRD18BA2A2Z9 1011 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 TXLNAP40222 546 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 JMYQ8N9B5 988 aa7.36□□□□□ -1.23
GTDC1-204ENST00000392869 EIF4G1Q04637 1599 aaKnown RBP7.35□□□□□ -1.23
GTDC1-204ENST00000392869 CALCOCO1Q9P1Z2 691 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 SETSIPP0DME0 302 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
GTDC1-204ENST00000392869 GIMAP7Q8NHV1 300 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 ZBED9Q6R2W3 1325 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 ZNHIT6Q9NWK9 470 aaKnown RBP7.35□□□□□ -1.23
GTDC1-204ENST00000392869 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
GTDC1-204ENST00000392869 SENP3Q9H4L4 574 aaPredicted RBP7.35□□□□□ -1.23
GTDC1-204ENST00000392869 R3HCC1Q9Y3T6 440 aaKnown RBP7.34□□□□□ -1.23
GTDC1-204ENST00000392869 WWC2Q6AWC2 1192 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 PCMTD1Q96MG8 357 aaPredicted RBP7.34□□□□□ -1.23
GTDC1-204ENST00000392869 CT47B1P0C2W7 299 aaPredicted RBP7.34□□□□□ -1.23
GTDC1-204ENST00000392869 IFT57Q9NWB7 429 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 SLKQ9H2G2 1235 aaPredicted RBP7.34□□□□□ -1.23
GTDC1-204ENST00000392869 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 CCDC7Q96M83 1385 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 SYCP1Q15431 976 aa7.34□□□□□ -1.23
GTDC1-204ENST00000392869 POTEB2H3BUK9 544 aa7.34□□□□□ -1.24
GTDC1-204ENST00000392869 HOOK3Q86VS8 718 aa7.34□□□□□ -1.24
GTDC1-204ENST00000392869 CWC22Q9HCG8 908 aaKnown RBP7.34□□□□□ -1.24
GTDC1-204ENST00000392869 USH1CQ9Y6N9 552 aa7.34□□□□□ -1.24
GTDC1-204ENST00000392869 CTR9Q6PD62 1173 aa7.34□□□□□ -1.24
GTDC1-204ENST00000392869 CCDC43Q96MW1 224 aaKnown RBP7.34□□□□□ -1.24
GTDC1-204ENST00000392869 ERC2O15083 957 aa7.33□□□□□ -1.24
GTDC1-204ENST00000392869 AEBP1Q8IUX7 1158 aa7.33□□□□□ -1.24
GTDC1-204ENST00000392869 FAM13BQ9NYF5 915 aa7.33□□□□□ -1.24
GTDC1-204ENST00000392869 PRKCSHP14314 528 aaPredicted RBP7.33□□□□□ -1.24
GTDC1-204ENST00000392869 SHTN1A0MZ66 631 aa7.33□□□□□ -1.24
GTDC1-204ENST00000392869 OFD1O75665 1012 aa7.33□□□□□ -1.24
GTDC1-204ENST00000392869 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
GTDC1-204ENST00000392869 CPLX1O14810 134 aa7.32□□□□□ -1.24
GTDC1-204ENST00000392869 CLASRPQ8N2M8 674 aaKnown RBP7.32□□□□□ -1.24
GTDC1-204ENST00000392869 TUBB4AP04350 444 aa7.32□□□□□ -1.24
GTDC1-204ENST00000392869 DZIP1LQ8IYY4 767 aaKnown RBP7.32□□□□□ -1.24
GTDC1-204ENST00000392869 ANKRD1Q15327 319 aa7.32□□□□□ -1.24
GTDC1-204ENST00000392869 MYBBP1AQ9BQG0 1328 aaKnown RBP7.32□□□□□ -1.24
GTDC1-204ENST00000392869 SSR1P43307 286 aaKnown RBP7.32□□□□□ -1.24
GTDC1-204ENST00000392869 STIM1Q13586 685 aa7.32□□□□□ -1.24
GTDC1-204ENST00000392869 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.31□□□□□ -1.249e-11■■■■■ 284.2
GTDC1-204ENST00000392869 CCDC18Q5T9S5 1454 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 G3V3G9 751 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 DCAF8Q5TAQ9 597 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 ZNF592Q92610 1267 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 PATL2C9JE40 543 aaKnown RBP7.31□□□□□ -1.24
GTDC1-204ENST00000392869 SMC2O95347 1197 aa7.31□□□□□ -1.24
GTDC1-204ENST00000392869 GIGYF2Q6Y7W6 1299 aaKnown RBP7.3□□□□□ -1.24
GTDC1-204ENST00000392869 DNAAF4Q8WXU2 420 aa7.3□□□□□ -1.24
GTDC1-204ENST00000392869 CARMIL2Q6F5E8 1435 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms