RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 THSD4Q6ZMP0 1018 aa13.71□□□□□ -0.21
SNORA40.4-201ENST00000390971 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
SNORA40.4-201ENST00000390971 BCAMP50895 628 aa13.68□□□□□ -0.22
SNORA40.4-201ENST00000390971 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
SNORA40.4-201ENST00000390971 TRIM66O15016 1216 aa13.67□□□□□ -0.22
SNORA40.4-201ENST00000390971 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
SNORA40.4-201ENST00000390971 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
SNORA40.4-201ENST00000390971 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
SNORA40.4-201ENST00000390971 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
SNORA40.4-201ENST00000390971 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
SNORA40.4-201ENST00000390971 PPP4CP60510 307 aa13.64□□□□□ -0.23
SNORA40.4-201ENST00000390971 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
SNORA40.4-201ENST00000390971 RSPH4AQ5TD94 716 aa13.64□□□□□ -0.23
SNORA40.4-201ENST00000390971 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
SNORA40.4-201ENST00000390971 RNF40O75150 1001 aa13.63□□□□□ -0.23
SNORA40.4-201ENST00000390971 CLCN1P35523 988 aa13.63□□□□□ -0.23
SNORA40.4-201ENST00000390971 PTPN5P54829 565 aa13.63□□□□□ -0.23
SNORA40.4-201ENST00000390971 AMHR2Q16671 573 aa13.63□□□□□ -0.23
SNORA40.4-201ENST00000390971 GPCPD1Q9NPB8 672 aa13.61□□□□□ -0.23
SNORA40.4-201ENST00000390971 SULF1Q8IWU6 871 aa13.6□□□□□ -0.23
SNORA40.4-201ENST00000390971 WBP1LQ9NX94 342 aa13.59□□□□□ -0.23
SNORA40.4-201ENST00000390971 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
SNORA40.4-201ENST00000390971 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
SNORA40.4-201ENST00000390971 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
SNORA40.4-201ENST00000390971 TMUB1Q9BVT8 246 aa13.58□□□□□ -0.24
SNORA40.4-201ENST00000390971 PDE4DQ08499 809 aa13.57□□□□□ -0.24
SNORA40.4-201ENST00000390971 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
SNORA40.4-201ENST00000390971 SLC10A3P09131 477 aa13.54□□□□□ -0.24
SNORA40.4-201ENST00000390971 RDH13Q8NBN7 331 aa13.54□□□□□ -0.24
SNORA40.4-201ENST00000390971 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
SNORA40.4-201ENST00000390971 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
SNORA40.4-201ENST00000390971 FAM217BQ9NTX9 383 aaPredicted RBP13.52□□□□□ -0.25
SNORA40.4-201ENST00000390971 KMT5BQ4FZB7 885 aa13.51□□□□□ -0.25
SNORA40.4-201ENST00000390971 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
SNORA40.4-201ENST00000390971 SSTR3P32745 418 aaPredicted RBP13.5□□□□□ -0.25
SNORA40.4-201ENST00000390971 GIGYF2Q6Y7W6 1299 aaKnown RBP13.5□□□□□ -0.25
SNORA40.4-201ENST00000390971 CFHP08603 1231 aa13.48□□□□□ -0.25
SNORA40.4-201ENST00000390971 CD46P15529 392 aa13.48□□□□□ -0.25
SNORA40.4-201ENST00000390971 APLP1P51693 650 aa13.47□□□□□ -0.25
SNORA40.4-201ENST00000390971 GCGRP47871 477 aa13.46□□□□□ -0.25
SNORA40.4-201ENST00000390971 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
SNORA40.4-201ENST00000390971 MS4A1P11836 297 aa13.4□□□□□ -0.26
SNORA40.4-201ENST00000390971 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
SNORA40.4-201ENST00000390971 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
SNORA40.4-201ENST00000390971 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
SNORA40.4-201ENST00000390971 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
SNORA40.4-201ENST00000390971 KDM4AO75164 1064 aa13.38□□□□□ -0.27
SNORA40.4-201ENST00000390971 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
SNORA40.4-201ENST00000390971 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
SNORA40.4-201ENST00000390971 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
SNORA40.4-201ENST00000390971 USP46P62068 366 aa13.37□□□□□ -0.27
SNORA40.4-201ENST00000390971 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
SNORA40.4-201ENST00000390971 FUT2Q10981 343 aa13.35□□□□□ -0.27
SNORA40.4-201ENST00000390971 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
SNORA40.4-201ENST00000390971 DIXDC1Q155Q3 683 aa13.34□□□□□ -0.27
SNORA40.4-201ENST00000390971 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
SNORA40.4-201ENST00000390971 MTRQ99707 1265 aa13.34□□□□□ -0.27
SNORA40.4-201ENST00000390971 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
SNORA40.4-201ENST00000390971 NR1I2O75469 434 aa13.32□□□□□ -0.28
SNORA40.4-201ENST00000390971 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
SNORA40.4-201ENST00000390971 COPS2P61201 443 aa13.32□□□□□ -0.28
SNORA40.4-201ENST00000390971 KCNC4Q03721 635 aa13.31□□□□□ -0.28
SNORA40.4-201ENST00000390971 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
SNORA40.4-201ENST00000390971 BLOC1S3Q6QNY0 202 aa13.31□□□□□ -0.28
SNORA40.4-201ENST00000390971 SPIRE2Q8WWL2 714 aa13.31□□□□□ -0.28
SNORA40.4-201ENST00000390971 MORN1Q5T089 497 aa13.3□□□□□ -0.28
SNORA40.4-201ENST00000390971 DDRGK1Q96HY6 314 aa13.3□□□□□ -0.28
SNORA40.4-201ENST00000390971 PLA2G2EQ9NZK7 142 aa13.29□□□□□ -0.28
SNORA40.4-201ENST00000390971 SCUBE3Q8IX30 993 aa13.28□□□□□ -0.28
SNORA40.4-201ENST00000390971 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
SNORA40.4-201ENST00000390971 HOXA2O43364 376 aa13.27□□□□□ -0.29
SNORA40.4-201ENST00000390971 ZPR1O75312 459 aa13.27□□□□□ -0.29
SNORA40.4-201ENST00000390971 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
SNORA40.4-201ENST00000390971 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
SNORA40.4-201ENST00000390971 ZNF516Q92618 1163 aa13.26□□□□□ -0.29
SNORA40.4-201ENST00000390971 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
SNORA40.4-201ENST00000390971 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
SNORA40.4-201ENST00000390971 Q3C1V9 767 aa13.23□□□□□ -0.29
SNORA40.4-201ENST00000390971 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
SNORA40.4-201ENST00000390971 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
SNORA40.4-201ENST00000390971 GJA5P36382 358 aa13.21□□□□□ -0.29
SNORA40.4-201ENST00000390971 FDX1P10109 184 aa13.2□□□□□ -0.3
SNORA40.4-201ENST00000390971 NDUFV2P19404 249 aa13.2□□□□□ -0.3
SNORA40.4-201ENST00000390971 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
SNORA40.4-201ENST00000390971 PLEKHG3A1L390 1219 aa13.19□□□□□ -0.3
SNORA40.4-201ENST00000390971 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
SNORA40.4-201ENST00000390971 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
SNORA40.4-201ENST00000390971 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
SNORA40.4-201ENST00000390971 HLA-CQ95604 372 aa13.19□□□□□ -0.3
SNORA40.4-201ENST00000390971 SPTLC1O15269 473 aa13.18□□□□□ -0.3
SNORA40.4-201ENST00000390971 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
SNORA40.4-201ENST00000390971 GUCA2AQ02747 115 aa13.17□□□□□ -0.3
SNORA40.4-201ENST00000390971 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
SNORA40.4-201ENST00000390971 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
SNORA40.4-201ENST00000390971 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
SNORA40.4-201ENST00000390971 ADH1BP00325 375 aa13.16□□□□□ -0.3
SNORA40.4-201ENST00000390971 SPSB2Q99619 263 aa13.16□□□□□ -0.3
SNORA40.4-201ENST00000390971 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
SNORA40.4-201ENST00000390971 TLL1O43897 1013 aa13.14□□□□□ -0.31
SNORA40.4-201ENST00000390971 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms