RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 ZNF787Q6DD87 383 aa4.25□□□□□ -1.73
TRAV41-201ENST00000390468 MROH2BQ7Z745 1585 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 SUPT5HO00267 1087 aaKnown RBP4.24□□□□□ -1.73
TRAV41-201ENST00000390468 OSBPP22059 807 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 SLC4A3P48751 1232 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 SLF2Q8IX21 1173 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 V9GY48 417 aaPredicted RBP4.24□□□□□ -1.73
TRAV41-201ENST00000390468 CECR2Q9BXF3 1484 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 PRDM2Q13029 1718 aa4.24□□□□□ -1.73
TRAV41-201ENST00000390468 PCDHB3Q9Y5E6 796 aa4.23□□□□□ -1.73
TRAV41-201ENST00000390468 TLL1O43897 1013 aa4.22□□□□□ -1.73
TRAV41-201ENST00000390468 BLOC1S3Q6QNY0 202 aa4.22□□□□□ -1.73
TRAV41-201ENST00000390468 EIF4G1Q04637 1599 aaKnown RBP4.22□□□□□ -1.73
TRAV41-201ENST00000390468 RSF1Q96T23 1441 aaPredicted RBP4.21□□□□□ -1.73
TRAV41-201ENST00000390468 PPEF1O14829 653 aaPredicted RBP4.21□□□□□ -1.74
TRAV41-201ENST00000390468 ZPR1O75312 459 aa4.21□□□□□ -1.74
TRAV41-201ENST00000390468 PKDCCQ504Y2 493 aa4.21□□□□□ -1.74
TRAV41-201ENST00000390468 NECTIN2Q92692 538 aa4.21□□□□□ -1.74
TRAV41-201ENST00000390468 PEG3Q9GZU2 1588 aa4.21□□□□□ -1.74
TRAV41-201ENST00000390468 TOP2AP11388 1531 aaKnown RBP4.21□□□□□ -1.74
TRAV41-201ENST00000390468 SMARCA2P51531 1590 aa4.2□□□□□ -1.74
TRAV41-201ENST00000390468 SLC19A1P41440 591 aa4.2□□□□□ -1.74
TRAV41-201ENST00000390468 FAM161AQ3B820 660 aa4.2□□□□□ -1.74
TRAV41-201ENST00000390468 NPDC1Q9NQX5 325 aaPredicted RBP4.2□□□□□ -1.74
TRAV41-201ENST00000390468 RBM27Q9P2N5 1060 aaKnown RBP4.2□□□□□ -1.74
TRAV41-201ENST00000390468 FAM187AA6NFU0 413 aa4.19□□□□□ -1.74
TRAV41-201ENST00000390468 RNF223E7ERA6 249 aa4.19□□□□□ -1.74
TRAV41-201ENST00000390468 TNFRSF10AO00220 468 aa4.19□□□□□ -1.74
TRAV41-201ENST00000390468 S1PR4O95977 384 aa4.19□□□□□ -1.74
TRAV41-201ENST00000390468 MLLT3P42568 568 aaPredicted RBP4.19□□□□□ -1.74
TRAV41-201ENST00000390468 ZNF775Q96BV0 537 aaPredicted RBP4.19□□□□□ -1.74
TRAV41-201ENST00000390468 CC2D2AQ9P2K1 1620 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 NUTM2FA1L443 756 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 PLCB2Q00722 1185 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 TTC13Q8NBP0 860 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 EYA1Q99502 592 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 TMUB1Q9BVT8 246 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 PRR14Q9BWN1 585 aa4.18□□□□□ -1.74
TRAV41-201ENST00000390468 CFHP08603 1231 aa4.17□□□□□ -1.74
TRAV41-201ENST00000390468 DNAJB2P25686 324 aa4.17□□□□□ -1.74
TRAV41-201ENST00000390468 KMT5BQ4FZB7 885 aa4.17□□□□□ -1.74
TRAV41-201ENST00000390468 ZNF697Q5TEC3 545 aa4.17□□□□□ -1.74
TRAV41-201ENST00000390468 TRIM67Q6ZTA4 783 aa4.17□□□□□ -1.74
TRAV41-201ENST00000390468 HMGXB3Q12766 1538 aa4.16□□□□□ -1.74
TRAV41-201ENST00000390468 POTECB2RU33 542 aa4.16□□□□□ -1.74
TRAV41-201ENST00000390468 FOXC1Q12948 553 aa4.16□□□□□ -1.74
TRAV41-201ENST00000390468 SPRYD7Q5W111 196 aa4.16□□□□□ -1.74
TRAV41-201ENST00000390468 RBM46Q8TBY0 533 aaKnown RBP4.16□□□□□ -1.74
TRAV41-201ENST00000390468 EMID1Q96A84 441 aaPredicted RBP4.16□□□□□ -1.74
TRAV41-201ENST00000390468 ARIH1Q9Y4X5 557 aaPredicted RBP4.16□□□□□ -1.74
TRAV41-201ENST00000390468 BAZ1BQ9UIG0 1483 aaKnown RBP4.16□□□□□ -1.74
TRAV41-201ENST00000390468 RCCD1A6NED2 376 aa4.15□□□□□ -1.75
TRAV41-201ENST00000390468 ST8SIA5O15466 376 aa4.15□□□□□ -1.75
TRAV41-201ENST00000390468 PRKCSHP14314 528 aaPredicted RBP4.15□□□□□ -1.75
TRAV41-201ENST00000390468 PUS10Q3MIT2 529 aaKnown RBP4.15□□□□□ -1.75
TRAV41-201ENST00000390468 LIAT1Q6ZQX7 453 aa4.15□□□□□ -1.75
TRAV41-201ENST00000390468 ZNF598Q86UK7 904 aaKnown RBP4.15□□□□□ -1.75
TRAV41-201ENST00000390468 ATAD2BQ9ULI0 1458 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 ACTN4O43707 911 aaKnown RBP4.14□□□□□ -1.75
TRAV41-201ENST00000390468 HRCP23327 699 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 HAP1P54257 671 aaPredicted RBP4.14□□□□□ -1.75
TRAV41-201ENST00000390468 PTGDRQ13258 359 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 ANKLE1Q8NAG6 615 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 SLC6A16Q9GZN6 736 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 TMEM134Q9H6X4 195 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 ADGRG1Q9Y653 693 aa4.14□□□□□ -1.75
TRAV41-201ENST00000390468 NR1I2O75469 434 aa4.13□□□□□ -1.75
TRAV41-201ENST00000390468 DGAT1O75907 488 aa4.13□□□□□ -1.75
TRAV41-201ENST00000390468 ADH1BP00325 375 aa4.13□□□□□ -1.75
TRAV41-201ENST00000390468 PLA2G2CQ5R387 149 aa4.13□□□□□ -1.75
TRAV41-201ENST00000390468 KCNV2Q8TDN2 545 aa4.13□□□□□ -1.75
TRAV41-201ENST00000390468 SLC10A3P09131 477 aa4.12□□□□□ -1.75
TRAV41-201ENST00000390468 RDH13Q8NBN7 331 aa4.12□□□□□ -1.75
TRAV41-201ENST00000390468 TSHZ2Q9NRE2 1034 aa4.12□□□□□ -1.75
TRAV41-201ENST00000390468 ARHGEF1Q92888 912 aaKnown RBP4.11□□□□□ -1.75
TRAV41-201ENST00000390468 CCDC88BA6NC98 1476 aa4.11□□□□□ -1.75
TRAV41-201ENST00000390468 GDF9O60383 454 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 FCHSD2O94868 740 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 PRR20EP86478 221 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 PRR20CP86479 221 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 PRR20DP86480 221 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 PRR20BP86481 221 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 PRR20AP86496 221 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 SCUBE3Q8IX30 993 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 NLRP7Q8WX94 980 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 SPSB2Q99619 263 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 NCAPD3P42695 1498 aa4.1□□□□□ -1.75
TRAV41-201ENST00000390468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
TRAV41-201ENST00000390468 DDX11L8A8MPP1 907 aa4.09□□□□□ -1.75
TRAV41-201ENST00000390468 RSPH4AQ5TD94 716 aa4.09□□□□□ -1.75
TRAV41-201ENST00000390468 AAASQ9NRG9 546 aa4.09□□□□□ -1.75
TRAV41-201ENST00000390468 FCF1Q9Y324 198 aaKnown RBP4.09□□□□□ -1.75
TRAV41-201ENST00000390468 SEMA3EO15041 775 aa4.08□□□□□ -1.76
TRAV41-201ENST00000390468 KIF21AQ7Z4S6 1674 aa4.08□□□□□ -1.76
TRAV41-201ENST00000390468 CYP4X1Q8N118 509 aa4.08□□□□□ -1.76
TRAV41-201ENST00000390468 BCANQ96GW7 911 aa4.08□□□□□ -1.76
TRAV41-201ENST00000390468 DACH1Q9UI36 760 aa4.08□□□□□ -1.76
TRAV41-201ENST00000390468 TTC24A2A3L6 582 aaPredicted RBP4.07□□□□□ -1.76
TRAV41-201ENST00000390468 C11orf95C9JLR9 678 aaPredicted RBP4.07□□□□□ -1.76
TRAV41-201ENST00000390468 AXIN1O15169 862 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms